RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 NOL8Q76FK4 1167 aaKnown RBP13.69□□□□□ -0.22
CTCFL-221ENST00000608903 DHX32Q7L7V1 743 aaKnown RBP13.69□□□□□ -0.22
CTCFL-221ENST00000608903 CDAN1Q8IWY9 1227 aa13.69□□□□□ -0.22
CTCFL-221ENST00000608903 ZSWIM5Q9P217 1185 aa13.69□□□□□ -0.22
CTCFL-221ENST00000608903 ROBO3Q96MS0 1386 aa13.68□□□□□ -0.22
CTCFL-221ENST00000608903 MFSD6Q6ZSS7 791 aa13.68□□□□□ -0.22
CTCFL-221ENST00000608903 NCOA7Q8NI08 942 aa13.68□□□□□ -0.22
CTCFL-221ENST00000608903 PGAP2Q9UHJ9 254 aa13.68□□□□□ -0.22
CTCFL-221ENST00000608903 KDM4AO75164 1064 aa13.67□□□□□ -0.22
CTCFL-221ENST00000608903 NPM3O75607 178 aaKnown RBP13.67□□□□□ -0.22
CTCFL-221ENST00000608903 GABPAQ06546 454 aa13.67□□□□□ -0.22
CTCFL-221ENST00000608903 KIF4BQ2VIQ3 1234 aa13.67□□□□□ -0.22
CTCFL-221ENST00000608903 RRP12Q5JTH9 1297 aaKnown RBP13.67□□□□□ -0.22
CTCFL-221ENST00000608903 SENP2Q9HC62 589 aa13.67□□□□□ -0.22
CTCFL-221ENST00000608903 LARGE1O95461 756 aa13.67□□□□□ -0.22
CTCFL-221ENST00000608903 Q6ZUG5 572 aa13.67□□□□□ -0.22
CTCFL-221ENST00000608903 ALDH8A1Q9H2A2 487 aaPredicted RBP13.67□□□□□ -0.22
CTCFL-221ENST00000608903 DNAJC18Q9H819 358 aa13.67□□□□□ -0.22
CTCFL-221ENST00000608903 PRC1O43663 620 aa13.66□□□□□ -0.22
CTCFL-221ENST00000608903 ORC4O43929 436 aa13.66□□□□□ -0.22
CTCFL-221ENST00000608903 ENTPD3O75355 529 aa13.66□□□□□ -0.22
CTCFL-221ENST00000608903 AGXT2Q9BYV1 514 aa13.66□□□□□ -0.22
CTCFL-221ENST00000608903 VEZTQ9HBM0 779 aa13.66□□□□□ -0.22
CTCFL-221ENST00000608903 FAM196BA6NMK8 535 aa13.66□□□□□ -0.22
CTCFL-221ENST00000608903 POTECB2RU33 542 aa13.66□□□□□ -0.22
CTCFL-221ENST00000608903 H7C1D1 291 aa13.66□□□□□ -0.22
CTCFL-221ENST00000608903 ST18O60284 1047 aa13.66□□□□□ -0.22
CTCFL-221ENST00000608903 CDK8P49336 464 aa13.66□□□□□ -0.22
CTCFL-221ENST00000608903 MMP14P50281 582 aa13.66□□□□□ -0.22
CTCFL-221ENST00000608903 FAM47AQ5JRC9 791 aa13.66□□□□□ -0.22
CTCFL-221ENST00000608903 C16orf86Q6ZW13 317 aa13.66□□□□□ -0.22
CTCFL-221ENST00000608903 ZKSCAN3Q9BRR0 538 aa13.66□□□□□ -0.22
CTCFL-221ENST00000608903 TPCN1Q9ULQ1 816 aa13.66□□□□□ -0.22
CTCFL-221ENST00000608903 K7ELQ4 463 aaPredicted RBP13.65□□□□□ -0.22
CTCFL-221ENST00000608903 HMGB1P09429 215 aaKnown RBP13.65□□□□□ -0.22
CTCFL-221ENST00000608903 RASA1P20936 1047 aa13.65□□□□□ -0.22
CTCFL-221ENST00000608903 ST3GAL1Q11201 340 aa13.65□□□□□ -0.22
CTCFL-221ENST00000608903 IGDCC4Q8TDY8 1250 aa13.65□□□□□ -0.22
CTCFL-221ENST00000608903 TMEM39BQ9GZU3 492 aa13.65□□□□□ -0.22
CTCFL-221ENST00000608903 SLKQ9H2G2 1235 aaPredicted RBP13.65□□□□□ -0.22
CTCFL-221ENST00000608903 TOMM22Q9NS69 142 aa13.65□□□□□ -0.22
CTCFL-221ENST00000608903 HACL1Q9UJ83 578 aa13.65□□□□□ -0.22
CTCFL-221ENST00000608903 ATRNL1Q5VV63 1379 aa13.65□□□□□ -0.22
CTCFL-221ENST00000608903 GLTPD2A6NH11 291 aa13.64□□□□□ -0.23
CTCFL-221ENST00000608903 DTNBO60941 627 aa13.64□□□□□ -0.23
CTCFL-221ENST00000608903 MCM5P33992 734 aa13.64□□□□□ -0.23
CTCFL-221ENST00000608903 NFKBIBQ15653 356 aa13.64□□□□□ -0.23
CTCFL-221ENST00000608903 FKBP1CQ5VVH2 108 aa13.64□□□□□ -0.23
CTCFL-221ENST00000608903 RALYLQ86SE5 291 aaKnown RBP13.64□□□□□ -0.23
CTCFL-221ENST00000608903 FAM151AQ8WW52 585 aa13.64□□□□□ -0.23
CTCFL-221ENST00000608903 TMX3Q96JJ7 454 aa13.64□□□□□ -0.23
CTCFL-221ENST00000608903 L3MBTL3Q96JM7 780 aaPredicted RBP13.64□□□□□ -0.23
CTCFL-221ENST00000608903 KRT23Q9C075 422 aa13.64□□□□□ -0.23
CTCFL-221ENST00000608903 RNF41Q9H4P4 317 aaPredicted RBP13.64□□□□□ -0.23
CTCFL-221ENST00000608903 POLR2AP24928 1970 aaKnown RBP13.64□□□□□ -0.23
CTCFL-221ENST00000608903 NMT2O60551 498 aa13.64□□□□□ -0.23
CTCFL-221ENST00000608903 SHMT1P34896 483 aa13.64□□□□□ -0.23
CTCFL-221ENST00000608903 TRDNQ13061 729 aa13.64□□□□□ -0.23
CTCFL-221ENST00000608903 RRP1BQ14684 758 aaKnown RBP13.64□□□□□ -0.23
CTCFL-221ENST00000608903 ME3Q16798 604 aa13.64□□□□□ -0.23
CTCFL-221ENST00000608903 SHROOM1Q2M3G4 852 aaPredicted RBP13.64□□□□□ -0.23
CTCFL-221ENST00000608903 TTC6Q86TZ1 520 aa13.64□□□□□ -0.23
CTCFL-221ENST00000608903 HSCBQ8IWL3 235 aa13.64□□□□□ -0.23
CTCFL-221ENST00000608903 BRF1Q92994 677 aa13.64□□□□□ -0.23
CTCFL-221ENST00000608903 TEPSINQ96N21 525 aa13.64□□□□□ -0.23
CTCFL-221ENST00000608903 CNNM2Q9H8M5 875 aa13.64□□□□□ -0.23
CTCFL-221ENST00000608903 BRPF3Q9ULD4 1205 aa13.64□□□□□ -0.23
CTCFL-221ENST00000608903 SH2B2O14492 632 aaPredicted RBP13.63□□□□□ -0.23
CTCFL-221ENST00000608903 RANBP6O60518 1105 aaKnown RBP13.63□□□□□ -0.23
CTCFL-221ENST00000608903 APOBRQ0VD83 1088 aa13.63□□□□□ -0.23
CTCFL-221ENST00000608903 METTL16Q86W50 562 aaKnown RBP13.63□□□□□ -0.23
CTCFL-221ENST00000608903 FBXL16Q8N461 479 aa13.63□□□□□ -0.23
CTCFL-221ENST00000608903 SPRYD3Q8NCJ5 442 aa13.63□□□□□ -0.23
CTCFL-221ENST00000608903 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.63□□□□□ -0.23
CTCFL-221ENST00000608903 IL17RBQ9NRM6 502 aa13.63□□□□□ -0.23
CTCFL-221ENST00000608903 TMOD2Q9NZR1 351 aa13.63□□□□□ -0.23
CTCFL-221ENST00000608903 COL2A1P02458 1487 aaPredicted RBP13.63□□□□□ -0.23
CTCFL-221ENST00000608903 PDE4BQ07343 736 aa13.63□□□□□ -0.23
CTCFL-221ENST00000608903 RASA3Q14644 834 aa13.63□□□□□ -0.23
CTCFL-221ENST00000608903 SEC23AQ15436 765 aa13.63□□□□□ -0.23
CTCFL-221ENST00000608903 ANGEL2Q5VTE6 544 aaKnown RBP13.63□□□□□ -0.23
CTCFL-221ENST00000608903 DPY19L2Q6NUT2 758 aa13.63□□□□□ -0.23
CTCFL-221ENST00000608903 DLK2Q6UY11 383 aa13.63□□□□□ -0.23
CTCFL-221ENST00000608903 ZSCAN29Q8IWY8 852 aaPredicted RBP13.63□□□□□ -0.23
CTCFL-221ENST00000608903 DHX36Q9H2U1 1008 aaKnown RBP13.63□□□□□ -0.23
CTCFL-221ENST00000608903 SERPINB13Q9UIV8 391 aa13.63□□□□□ -0.23
CTCFL-221ENST00000608903 LIMCH1Q9UPQ0 1083 aa13.63□□□□□ -0.23
CTCFL-221ENST00000608903 WDR19Q8NEZ3 1342 aa13.63□□□□□ -0.23
CTCFL-221ENST00000608903 MYO1BO43795 1136 aa13.62□□□□□ -0.23
CTCFL-221ENST00000608903 SLC3A2P08195 630 aaKnown RBP13.62□□□□□ -0.23
CTCFL-221ENST00000608903 PCP11498 1178 aaKnown RBP13.62□□□□□ -0.23
CTCFL-221ENST00000608903 JAG1P78504 1218 aa13.62□□□□□ -0.23
CTCFL-221ENST00000608903 TFAP4Q01664 338 aa13.62□□□□□ -0.23
CTCFL-221ENST00000608903 FAM83AQ86UY5 434 aa13.62□□□□□ -0.23
CTCFL-221ENST00000608903 AMOTL1Q8IY63 956 aa13.62□□□□□ -0.23
CTCFL-221ENST00000608903 ESR2Q92731 530 aa13.62□□□□□ -0.23
CTCFL-221ENST00000608903 EHD4Q9H223 541 aa13.62□□□□□ -0.23
CTCFL-221ENST00000608903 LY9Q9HBG7 655 aa13.62□□□□□ -0.23
CTCFL-221ENST00000608903 ADARB2Q9NS39 739 aaKnown RBP13.62□□□□□ -0.23
CTCFL-221ENST00000608903 PI4KBQ9UBF8 816 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms