RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 MAGEB6P1A0A0J9YX57 407 aa17.56■□□□□ 0.4
HDDC2-204ENST00000608295 PPP4CP60510 307 aa17.56■□□□□ 0.4
HDDC2-204ENST00000608295 SHROOM1Q2M3G4 852 aaPredicted RBP17.56■□□□□ 0.4
HDDC2-204ENST00000608295 NOL9Q5SY16 702 aaKnown RBP17.56■□□□□ 0.4
HDDC2-204ENST00000608295 OTUD7BQ6GQQ9 843 aa17.56■□□□□ 0.4
HDDC2-204ENST00000608295 LCORLQ8N3X6 602 aa17.56■□□□□ 0.4
HDDC2-204ENST00000608295 CRACR2BQ8N4Y2 399 aaPredicted RBP17.56■□□□□ 0.4
HDDC2-204ENST00000608295 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.56■□□□□ 0.4
HDDC2-204ENST00000608295 GPATCH3Q96I76 525 aa17.56■□□□□ 0.4
HDDC2-204ENST00000608295 ECHDC1Q9NTX5 307 aa17.56■□□□□ 0.4
HDDC2-204ENST00000608295 TRIM75PA6NK02 468 aa17.55■□□□□ 0.4
HDDC2-204ENST00000608295 BTBD19C9JJ37 291 aa17.55■□□□□ 0.4
HDDC2-204ENST00000608295 GDF11O95390 407 aa17.55■□□□□ 0.4
HDDC2-204ENST00000608295 ALDH1A1P00352 501 aa17.55■□□□□ 0.4
HDDC2-204ENST00000608295 CETPP11597 493 aa17.55■□□□□ 0.4
HDDC2-204ENST00000608295 PTPRAP18433 802 aa17.55■□□□□ 0.4
HDDC2-204ENST00000608295 INHBEP58166 350 aa17.55■□□□□ 0.4
HDDC2-204ENST00000608295 EVX2Q03828 476 aa17.55■□□□□ 0.4
HDDC2-204ENST00000608295 PPATQ06203 517 aa17.55■□□□□ 0.4
HDDC2-204ENST00000608295 RRP1BQ14684 758 aaKnown RBP17.55■□□□□ 0.4
HDDC2-204ENST00000608295 DNAJC18Q9H819 358 aa17.55■□□□□ 0.4
HDDC2-204ENST00000608295 ARMT1Q9H993 441 aa17.55■□□□□ 0.4
HDDC2-204ENST00000608295 ZHX2Q9Y6X8 837 aa17.55■□□□□ 0.4
HDDC2-204ENST00000608295 FKTNO75072 461 aa17.54■□□□□ 0.4
HDDC2-204ENST00000608295 MBD4O95243 580 aa17.54■□□□□ 0.4
HDDC2-204ENST00000608295 GADL1Q6ZQY3 521 aa17.54■□□□□ 0.4
HDDC2-204ENST00000608295 SDR42E1Q8WUS8 393 aa17.54■□□□□ 0.4
HDDC2-204ENST00000608295 MYH8P13535 1937 aa17.53■□□□□ 0.4
HDDC2-204ENST00000608295 TCRBV5S4A2TA0A5A2 114 aa17.53■□□□□ 0.4
HDDC2-204ENST00000608295 TESPA1A2RU30 521 aaPredicted RBP17.53■□□□□ 0.4
HDDC2-204ENST00000608295 CCDC85CA6NKD9 419 aa17.53■□□□□ 0.4
HDDC2-204ENST00000608295 NPM3O75607 178 aaKnown RBP17.53■□□□□ 0.4
HDDC2-204ENST00000608295 HLA-DOAP06340 250 aa17.53■□□□□ 0.4
HDDC2-204ENST00000608295 ADD2P35612 726 aa17.53■□□□□ 0.4
HDDC2-204ENST00000608295 ANKRD45Q5TZF3 282 aa17.53■□□□□ 0.4
HDDC2-204ENST00000608295 CTU1Q7Z7A3 348 aaKnown RBP17.53■□□□□ 0.4
HDDC2-204ENST00000608295 CD99L2Q8TCZ2 262 aa17.53■□□□□ 0.4
HDDC2-204ENST00000608295 RIOK1Q9BRS2 568 aaKnown RBP17.53■□□□□ 0.4
HDDC2-204ENST00000608295 ZBTB47Q9UFB7 747 aaPredicted RBP17.53■□□□□ 0.4
HDDC2-204ENST00000608295 PRKAB2O43741 272 aa17.52■□□□□ 0.4
HDDC2-204ENST00000608295 CTNND1O60716 968 aaKnown RBP17.52■□□□□ 0.4
HDDC2-204ENST00000608295 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.52■□□□□ 0.4
HDDC2-204ENST00000608295 PI4KBQ9UBF8 816 aa17.52■□□□□ 0.4
HDDC2-204ENST00000608295 PDHXO00330 501 aa17.51■□□□□ 0.39
HDDC2-204ENST00000608295 CYP2D6P10635 497 aa17.51■□□□□ 0.39
HDDC2-204ENST00000608295 JAG1P78504 1218 aa17.51■□□□□ 0.39
HDDC2-204ENST00000608295 B4GALNT3Q6L9W6 998 aa17.51■□□□□ 0.39
HDDC2-204ENST00000608295 CRNKL1Q9BZJ0 848 aaKnown RBP17.51■□□□□ 0.39
HDDC2-204ENST00000608295 DHX36Q9H2U1 1008 aaKnown RBP17.51■□□□□ 0.39
HDDC2-204ENST00000608295 ZFYVE28Q9HCC9 887 aa17.51■□□□□ 0.39
HDDC2-204ENST00000608295 MCM9Q9NXL9 1143 aa17.51■□□□□ 0.39
HDDC2-204ENST00000608295 KCNH4Q9UQ05 1017 aa17.51■□□□□ 0.39
HDDC2-204ENST00000608295 LOC285556D6RIA3 1793 aa17.51■□□□□ 0.39
HDDC2-204ENST00000608295 POLR3DP05423 398 aaPredicted RBP17.5■□□□□ 0.39
HDDC2-204ENST00000608295 MAP3K10Q02779 954 aa17.5■□□□□ 0.39
HDDC2-204ENST00000608295 HERC5Q9UII4 1024 aaKnown RBP17.5■□□□□ 0.39
HDDC2-204ENST00000608295 TRIM17Q9Y577 477 aa17.5■□□□□ 0.39
HDDC2-204ENST00000608295 TBC1D12O60347 775 aa17.49■□□□□ 0.39
HDDC2-204ENST00000608295 CYP2C8P10632 490 aa17.49■□□□□ 0.39
HDDC2-204ENST00000608295 MX1P20591 662 aa17.49■□□□□ 0.39
HDDC2-204ENST00000608295 CAP2P40123 477 aa17.49■□□□□ 0.39
HDDC2-204ENST00000608295 CAP1Q01518 475 aa17.49■□□□□ 0.39
HDDC2-204ENST00000608295 MOGSQ13724 837 aa17.49■□□□□ 0.39
HDDC2-204ENST00000608295 CFHR5Q9BXR6 569 aa17.49■□□□□ 0.39
HDDC2-204ENST00000608295 LNPKQ9C0E8 428 aa17.49■□□□□ 0.39
HDDC2-204ENST00000608295 CPA4Q9UI42 421 aa17.49■□□□□ 0.39
HDDC2-204ENST00000608295 AFG3L2Q9Y4W6 797 aa17.49■□□□□ 0.39
HDDC2-204ENST00000608295 SMIM22K7EJ46 135 aa17.48■□□□□ 0.39
HDDC2-204ENST00000608295 PLCD1P51178 756 aa17.48■□□□□ 0.39
HDDC2-204ENST00000608295 SPP2Q13103 211 aa17.48■□□□□ 0.39
HDDC2-204ENST00000608295 CERS3Q8IU89 383 aa17.48■□□□□ 0.39
HDDC2-204ENST00000608295 PI4K2BQ8TCG2 481 aa17.48■□□□□ 0.39
HDDC2-204ENST00000608295 PUS7LQ9H0K6 701 aaKnown RBP17.48■□□□□ 0.39
HDDC2-204ENST00000608295 CYP2D7A0A087X1C5 515 aa17.47■□□□□ 0.39
HDDC2-204ENST00000608295 A0A0G2JLL6 359 aaPredicted RBP17.47■□□□□ 0.39
HDDC2-204ENST00000608295 IGSF3O75054 1194 aa17.47■□□□□ 0.39
HDDC2-204ENST00000608295 HMGCS2P54868 508 aa17.47■□□□□ 0.39
HDDC2-204ENST00000608295 SP3Q02447 781 aa17.47■□□□□ 0.39
HDDC2-204ENST00000608295 HDAC1Q13547 482 aaPredicted RBP17.47■□□□□ 0.39
HDDC2-204ENST00000608295 MTMR2Q13614 643 aa17.47■□□□□ 0.39
HDDC2-204ENST00000608295 ZYXQ15942 572 aaKnown RBP17.47■□□□□ 0.39
HDDC2-204ENST00000608295 TREML2Q5T2D2 321 aa17.47■□□□□ 0.39
HDDC2-204ENST00000608295 ZSCAN25Q6NSZ9 544 aa17.47■□□□□ 0.39
HDDC2-204ENST00000608295 PRRT2Q7Z6L0 340 aaPredicted RBP17.47■□□□□ 0.39
HDDC2-204ENST00000608295 ANKRD23Q86SG2 305 aa17.47■□□□□ 0.39
HDDC2-204ENST00000608295 STK11IPQ8N1F8 1099 aa17.47■□□□□ 0.39
HDDC2-204ENST00000608295 KBTBD3Q8NAB2 608 aa17.47■□□□□ 0.39
HDDC2-204ENST00000608295 SLC44A5Q8NCS7 719 aa17.47■□□□□ 0.39
HDDC2-204ENST00000608295 FSD1Q9BTV5 496 aa17.47■□□□□ 0.39
HDDC2-204ENST00000608295 ARHGAP39Q9C0H5 1083 aa17.47■□□□□ 0.39
HDDC2-204ENST00000608295 ZBTB21Q9ULJ3 1066 aa17.47■□□□□ 0.39
HDDC2-204ENST00000608295 SLC4A4Q9Y6R1 1079 aa17.47■□□□□ 0.39
HDDC2-204ENST00000608295 CXCL11O14625 94 aa17.46■□□□□ 0.39
HDDC2-204ENST00000608295 GH2P01242 217 aa17.46■□□□□ 0.39
HDDC2-204ENST00000608295 IGHDP01880 384 aa17.46■□□□□ 0.39
HDDC2-204ENST00000608295 GPAT2Q6NUI2 795 aa17.46■□□□□ 0.39
HDDC2-204ENST00000608295 OTOP1Q7RTM1 612 aa17.46■□□□□ 0.39
HDDC2-204ENST00000608295 TTC6Q86TZ1 520 aa17.46■□□□□ 0.39
HDDC2-204ENST00000608295 GCC1Q96CN9 775 aa17.46■□□□□ 0.39
HDDC2-204ENST00000608295 ERO1AQ96HE7 468 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms