RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 CICQ96RK0 1608 aaPredicted RBP18.41■□□□□ 0.54
CTSA-214ENST00000606788 C6orf229H3BNL8 230 aa18.41■□□□□ 0.54
CTSA-214ENST00000606788 LIFRP42702 1097 aa18.41■□□□□ 0.54
CTSA-214ENST00000606788 USP5P45974 858 aa18.41■□□□□ 0.54
CTSA-214ENST00000606788 GPSM2P81274 684 aa18.41■□□□□ 0.54
CTSA-214ENST00000606788 MSL1Q68DK7 614 aa18.41■□□□□ 0.54
CTSA-214ENST00000606788 TRIM22Q8IYM9 498 aa18.41■□□□□ 0.54
CTSA-214ENST00000606788 PDILTQ8N807 584 aa18.41■□□□□ 0.54
CTSA-214ENST00000606788 RNF41Q9H4P4 317 aaPredicted RBP18.41■□□□□ 0.54
CTSA-214ENST00000606788 GYS1P13807 737 aa18.41■□□□□ 0.54
CTSA-214ENST00000606788 VEGFAP15692 232 aaPredicted RBP18.41■□□□□ 0.54
CTSA-214ENST00000606788 UVSSAQ2YD98 709 aa18.41■□□□□ 0.54
CTSA-214ENST00000606788 RASGRP2Q7LDG7 609 aa18.41■□□□□ 0.54
CTSA-214ENST00000606788 MAPKAPK5Q8IW41 473 aa18.41■□□□□ 0.54
CTSA-214ENST00000606788 ENGASEQ8NFI3 743 aa18.41■□□□□ 0.54
CTSA-214ENST00000606788 SH3RF3Q8TEJ3 882 aaPredicted RBP18.41■□□□□ 0.54
CTSA-214ENST00000606788 ANKRD2Q9GZV1 360 aa18.41■□□□□ 0.54
CTSA-214ENST00000606788 MYH2Q9UKX2 1941 aa18.4■□□□□ 0.54
CTSA-214ENST00000606788 PTGS1P23219 599 aa18.4■□□□□ 0.54
CTSA-214ENST00000606788 TGFBRAP1Q8WUH2 860 aa18.4■□□□□ 0.54
CTSA-214ENST00000606788 ZSCAN10Q96SZ4 725 aaPredicted RBP18.4■□□□□ 0.54
CTSA-214ENST00000606788 BCL11BQ9C0K0 894 aaPredicted RBP18.4■□□□□ 0.54
CTSA-214ENST00000606788 TRPC5Q9UL62 973 aaPredicted RBP18.4■□□□□ 0.54
CTSA-214ENST00000606788 BECN2A8MW95 431 aa18.4■□□□□ 0.54
CTSA-214ENST00000606788 PFKFB1P16118 471 aa18.4■□□□□ 0.54
CTSA-214ENST00000606788 HSP90AA4PQ58FG1 418 aa18.4■□□□□ 0.54
CTSA-214ENST00000606788 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.4■□□□□ 0.54
CTSA-214ENST00000606788 COL5A3P25940 1745 aaPredicted RBP18.39■□□□□ 0.54
CTSA-214ENST00000606788 TSPY2A6NKD2 308 aa18.39■□□□□ 0.54
CTSA-214ENST00000606788 PTPN21Q16825 1174 aa18.39■□□□□ 0.54
CTSA-214ENST00000606788 ADALQ6DHV7 355 aa18.39■□□□□ 0.54
CTSA-214ENST00000606788 FMR1NBQ8N0W7 255 aaPredicted RBP18.39■□□□□ 0.54
CTSA-214ENST00000606788 CABP5Q9NP86 173 aa18.39■□□□□ 0.54
CTSA-214ENST00000606788 SPATA31A6Q5VVP1 1343 aa18.39■□□□□ 0.53
CTSA-214ENST00000606788 ZNF202O95125 648 aa18.39■□□□□ 0.53
CTSA-214ENST00000606788 LDHBP07195 334 aaKnown RBP18.39■□□□□ 0.53
CTSA-214ENST00000606788 AKAP17AQ02040 695 aaKnown RBP18.39■□□□□ 0.53
CTSA-214ENST00000606788 LRMPQ12912 555 aa18.39■□□□□ 0.53
CTSA-214ENST00000606788 GRAPQ13588 217 aa18.39■□□□□ 0.53
CTSA-214ENST00000606788 AOPEPQ8N6M6 819 aa18.39■□□□□ 0.53
CTSA-214ENST00000606788 GRAPLQ8TC17 118 aaPredicted RBP18.39■□□□□ 0.53
CTSA-214ENST00000606788 CRNKL1Q9BZJ0 848 aaKnown RBP18.39■□□□□ 0.53
CTSA-214ENST00000606788 MYH13Q9UKX3 1938 aa18.39■□□□□ 0.53
CTSA-214ENST00000606788 WDR19Q8NEZ3 1342 aa18.39■□□□□ 0.53
CTSA-214ENST00000606788 GOLGA6L19H0YKK7 550 aa18.38■□□□□ 0.53
CTSA-214ENST00000606788 ZRSR1Q15695 479 aaKnown RBP18.38■□□□□ 0.53
CTSA-214ENST00000606788 BRAPQ7Z569 592 aa18.38■□□□□ 0.53
CTSA-214ENST00000606788 CRACR2BQ8N4Y2 399 aaPredicted RBP18.38■□□□□ 0.53
CTSA-214ENST00000606788 CERKQ8TCT0 537 aa18.38■□□□□ 0.53
CTSA-214ENST00000606788 SRCAPQ6ZRS2 3230 aa18.38■□□□□ 0.53
CTSA-214ENST00000606788 FMNL1O95466 1100 aaPredicted RBP18.38■□□□□ 0.53
CTSA-214ENST00000606788 DPCR1Q3MIW9 517 aa18.38■□□□□ 0.53
CTSA-214ENST00000606788 IQCA1Q86XH1 822 aa18.38■□□□□ 0.53
CTSA-214ENST00000606788 KCNG4Q8TDN1 519 aa18.38■□□□□ 0.53
CTSA-214ENST00000606788 CPVLQ9H3G5 476 aa18.38■□□□□ 0.53
CTSA-214ENST00000606788 SHISA4Q96DD7 197 aa18.38■□□□□ 0.53
CTSA-214ENST00000606788 POLR3EQ9NVU0 708 aa18.38■□□□□ 0.53
CTSA-214ENST00000606788 PCDHB6Q9Y5E3 794 aa18.38■□□□□ 0.53
CTSA-214ENST00000606788 FOXN1O15353 648 aa18.37■□□□□ 0.53
CTSA-214ENST00000606788 IFNAR1P17181 557 aa18.37■□□□□ 0.53
CTSA-214ENST00000606788 DDR1Q08345 913 aa18.37■□□□□ 0.53
CTSA-214ENST00000606788 EARS2Q5JPH6 523 aaKnown RBP18.37■□□□□ 0.53
CTSA-214ENST00000606788 AXDND1Q5T1B0 1012 aaPredicted RBP18.37■□□□□ 0.53
CTSA-214ENST00000606788 MXD3Q9BW11 206 aa18.37■□□□□ 0.53
CTSA-214ENST00000606788 USP17L3A6NCW0 530 aa18.37■□□□□ 0.53
CTSA-214ENST00000606788 USP17L4A6NCW7 530 aa18.37■□□□□ 0.53
CTSA-214ENST00000606788 SAFBQ15424 915 aaKnown RBP eCLIP18.37■□□□□ 0.53
CTSA-214ENST00000606788 SEC23AQ15436 765 aa18.37■□□□□ 0.53
CTSA-214ENST00000606788 USP17L1Q7RTZ2 530 aa18.37■□□□□ 0.53
CTSA-214ENST00000606788 CCDC186Q7Z3E2 898 aa18.37■□□□□ 0.53
CTSA-214ENST00000606788 PYCARDQ9ULZ3 195 aa18.37■□□□□ 0.53
CTSA-214ENST00000606788 ARID5BQ14865 1188 aa18.36■□□□□ 0.53
CTSA-214ENST00000606788 SHC4Q6S5L8 630 aa18.36■□□□□ 0.53
CTSA-214ENST00000606788 CATIPQ7Z7H3 387 aa18.36■□□□□ 0.53
CTSA-214ENST00000606788 PNOCQ13519 176 aa18.36■□□□□ 0.53
CTSA-214ENST00000606788 ADAMTS3O15072 1205 aa18.36■□□□□ 0.53
CTSA-214ENST00000606788 SLC39A14Q15043 492 aa18.36■□□□□ 0.53
CTSA-214ENST00000606788 NBPF11Q86T75 865 aa18.36■□□□□ 0.53
CTSA-214ENST00000606788 GRAMD1CQ8IYS0 662 aa18.36■□□□□ 0.53
CTSA-214ENST00000606788 SYKP43405 635 aa18.35■□□□□ 0.53
CTSA-214ENST00000606788 KIAA2012Q0VF49 1180 aa18.35■□□□□ 0.53
CTSA-214ENST00000606788 STX1AQ16623 288 aa18.35■□□□□ 0.53
CTSA-214ENST00000606788 USP49Q70CQ1 688 aa18.35■□□□□ 0.53
CTSA-214ENST00000606788 KRT27Q7Z3Y8 459 aa18.35■□□□□ 0.53
CTSA-214ENST00000606788 FILIP1Q7Z7B0 1213 aa18.35■□□□□ 0.53
CTSA-214ENST00000606788 NOSTRINQ8IVI9 506 aa18.35■□□□□ 0.53
CTSA-214ENST00000606788 KCNF1Q9H3M0 494 aa18.35■□□□□ 0.53
CTSA-214ENST00000606788 WNT7AO00755 349 aa18.35■□□□□ 0.53
CTSA-214ENST00000606788 YEATS4O95619 227 aa18.35■□□□□ 0.53
CTSA-214ENST00000606788 SLC3A2P08195 630 aaKnown RBP18.35■□□□□ 0.53
CTSA-214ENST00000606788 SLURP2P0DP57 97 aa18.35■□□□□ 0.53
CTSA-214ENST00000606788 TOB1P50616 345 aaPredicted RBP18.35■□□□□ 0.53
CTSA-214ENST00000606788 PLCD1P51178 756 aa18.35■□□□□ 0.53
CTSA-214ENST00000606788 TFAP4Q01664 338 aa18.35■□□□□ 0.53
CTSA-214ENST00000606788 RBM43Q6ZSC3 357 aaKnown RBP18.35■□□□□ 0.53
CTSA-214ENST00000606788 STX8Q9UNK0 236 aa18.35■□□□□ 0.53
CTSA-214ENST00000606788 MMP1P03956 469 aa18.34■□□□□ 0.53
CTSA-214ENST00000606788 PROM2Q8N271 834 aa18.34■□□□□ 0.53
CTSA-214ENST00000606788 MKNK2Q9HBH9 465 aa18.34■□□□□ 0.53
CTSA-214ENST00000606788 GOLGA8HP0CJ92 632 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms