RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 CDCA5Q96FF9 252 aa9.16□□□□□ -0.94
MSH6-211ENST00000606499 NBPF3Q9H094 633 aa9.16□□□□□ -0.94
MSH6-211ENST00000606499 PPP2R3BQ9Y5P8 575 aa9.16□□□□□ -0.94
MSH6-211ENST00000606499 U3KPZ7 1027 aaPredicted RBP9.16□□□□□ -0.94
MSH6-211ENST00000606499 HLA-DOAP06340 250 aa9.15□□□□□ -0.94
MSH6-211ENST00000606499 CYP21A2P08686 494 aa9.15□□□□□ -0.94
MSH6-211ENST00000606499 PPARAQ07869 468 aa9.15□□□□□ -0.94
MSH6-211ENST00000606499 CDC37L1Q7L3B6 337 aa9.15□□□□□ -0.94
MSH6-211ENST00000606499 TBC1D10CQ8IV04 446 aa9.15□□□□□ -0.94
MSH6-211ENST00000606499 AMOTL1Q8IY63 956 aa9.15□□□□□ -0.94
MSH6-211ENST00000606499 SLC44A5Q8NCS7 719 aa9.15□□□□□ -0.94
MSH6-211ENST00000606499 DYNLL2Q96FJ2 89 aa9.15□□□□□ -0.94
MSH6-211ENST00000606499 BACH2Q9BYV9 841 aa9.15□□□□□ -0.94
MSH6-211ENST00000606499 DHX36Q9H2U1 1008 aaKnown RBP9.15□□□□□ -0.94
MSH6-211ENST00000606499 DNAJC18Q9H819 358 aa9.15□□□□□ -0.94
MSH6-211ENST00000606499 FZD1Q9UP38 647 aa9.15□□□□□ -0.94
MSH6-211ENST00000606499 GREB1LQ9C091 1923 aaPredicted RBP9.15□□□□□ -0.95
MSH6-211ENST00000606499 ZNF213O14771 459 aa9.14□□□□□ -0.95
MSH6-211ENST00000606499 SLC27A2O14975 620 aa9.14□□□□□ -0.95
MSH6-211ENST00000606499 PRKG1Q13976 671 aa9.14□□□□□ -0.95
MSH6-211ENST00000606499 NECTIN1Q15223 517 aa9.14□□□□□ -0.95
MSH6-211ENST00000606499 IMMTQ16891 758 aaKnown RBP9.14□□□□□ -0.95
MSH6-211ENST00000606499 CREB3L3Q68CJ9 461 aa9.14□□□□□ -0.95
MSH6-211ENST00000606499 MIGA2Q7L4E1 593 aa9.14□□□□□ -0.95
MSH6-211ENST00000606499 TTC6Q86TZ1 520 aa9.14□□□□□ -0.95
MSH6-211ENST00000606499 CRACR2BQ8N4Y2 399 aaPredicted RBP9.14□□□□□ -0.95
MSH6-211ENST00000606499 USP26Q9BXU7 913 aa9.14□□□□□ -0.95
MSH6-211ENST00000606499 EHD4Q9H223 541 aa9.14□□□□□ -0.95
MSH6-211ENST00000606499 ZNF408Q9H9D4 720 aa9.14□□□□□ -0.95
MSH6-211ENST00000606499 INCENPQ9NQS7 918 aa9.14□□□□□ -0.95
MSH6-211ENST00000606499 PI4KBQ9UBF8 816 aa9.14□□□□□ -0.95
MSH6-211ENST00000606499 CTNNA3Q9UI47 895 aa9.14□□□□□ -0.95
MSH6-211ENST00000606499 SERPINB13Q9UIV8 391 aa9.14□□□□□ -0.95
MSH6-211ENST00000606499 ANAPC4Q9UJX5 808 aa9.14□□□□□ -0.95
MSH6-211ENST00000606499 TACC3Q9Y6A5 838 aa9.14□□□□□ -0.95
MSH6-211ENST00000606499 NEDD4P46934 1319 aa9.13□□□□□ -0.95
MSH6-211ENST00000606499 PRDM1O75626 825 aa9.13□□□□□ -0.95
MSH6-211ENST00000606499 TOMM70O94826 608 aa9.13□□□□□ -0.95
MSH6-211ENST00000606499 ITGBL1O95965 494 aaPredicted RBP9.13□□□□□ -0.95
MSH6-211ENST00000606499 SHMT1P34896 483 aa9.13□□□□□ -0.95
MSH6-211ENST00000606499 HSPA4P34932 840 aa9.13□□□□□ -0.95
MSH6-211ENST00000606499 GABPAQ06546 454 aa9.13□□□□□ -0.95
MSH6-211ENST00000606499 SHROOM1Q2M3G4 852 aaPredicted RBP9.13□□□□□ -0.95
MSH6-211ENST00000606499 STOX1Q6ZVD7 989 aa9.13□□□□□ -0.95
MSH6-211ENST00000606499 C16orf86Q6ZW13 317 aa9.13□□□□□ -0.95
MSH6-211ENST00000606499 RASEFQ8IZ41 740 aa9.13□□□□□ -0.95
MSH6-211ENST00000606499 NKX2-3Q8TAU0 364 aa9.13□□□□□ -0.95
MSH6-211ENST00000606499 RBM46Q8TBY0 533 aaKnown RBP9.13□□□□□ -0.95
MSH6-211ENST00000606499 TRIM34Q9BYJ4 488 aa9.13□□□□□ -0.95
MSH6-211ENST00000606499 PHIPQ8WWQ0 1821 aa9.12□□□□□ -0.95
MSH6-211ENST00000606499 CEP350Q5VT06 3117 aa9.12□□□□□ -0.95
MSH6-211ENST00000606499 E7EWF7 191 aa9.12□□□□□ -0.95
MSH6-211ENST00000606499 CDK8P49336 464 aa9.12□□□□□ -0.95
MSH6-211ENST00000606499 COL9A3Q14050 684 aaPredicted RBP9.12□□□□□ -0.95
MSH6-211ENST00000606499 RRP1BQ14684 758 aaKnown RBP9.12□□□□□ -0.95
MSH6-211ENST00000606499 SUPT20HL1Q3ZLR7 823 aa9.12□□□□□ -0.95
MSH6-211ENST00000606499 MOB2Q70IA6 237 aa9.12□□□□□ -0.95
MSH6-211ENST00000606499 METTL16Q86W50 562 aaKnown RBP9.12□□□□□ -0.95
MSH6-211ENST00000606499 SMC1BQ8NDV3 1235 aa9.12□□□□□ -0.95
MSH6-211ENST00000606499 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.12□□□□□ -0.95
MSH6-211ENST00000606499 HERC5Q9UII4 1024 aaKnown RBP9.12□□□□□ -0.95
MSH6-211ENST00000606499 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.12□□□□□ -0.95
MSH6-211ENST00000606499 SNX14Q9Y5W7 946 aa9.12□□□□□ -0.95
MSH6-211ENST00000606499 PASKQ96RG2 1323 aa9.11□□□□□ -0.95
MSH6-211ENST00000606499 PHF20L1A8MW92 1017 aa9.11□□□□□ -0.95
MSH6-211ENST00000606499 EPB41L2O43491 1005 aaKnown RBP9.11□□□□□ -0.95
MSH6-211ENST00000606499 EIF5BO60841 1220 aaKnown RBP9.11□□□□□ -0.95
MSH6-211ENST00000606499 CELF2O95319 508 aaKnown RBP9.11□□□□□ -0.95
MSH6-211ENST00000606499 GDF11O95390 407 aa9.11□□□□□ -0.95
MSH6-211ENST00000606499 SLC3A2P08195 630 aaKnown RBP9.11□□□□□ -0.95
MSH6-211ENST00000606499 RASA1P20936 1047 aa9.11□□□□□ -0.95
MSH6-211ENST00000606499 MCCP23508 829 aa9.11□□□□□ -0.95
MSH6-211ENST00000606499 INPP5BP32019 993 aa9.11□□□□□ -0.95
MSH6-211ENST00000606499 NF2P35240 595 aa9.11□□□□□ -0.95
MSH6-211ENST00000606499 JAG1P78504 1218 aa9.11□□□□□ -0.95
MSH6-211ENST00000606499 MAP3K10Q02779 954 aa9.11□□□□□ -0.95
MSH6-211ENST00000606499 ADCK5Q3MIX3 580 aa9.11□□□□□ -0.95
MSH6-211ENST00000606499 RRP12Q5JTH9 1297 aaKnown RBP9.11□□□□□ -0.95
MSH6-211ENST00000606499 AKNAD1Q5T1N1 836 aa9.11□□□□□ -0.95
MSH6-211ENST00000606499 RNF20Q5VTR2 975 aa9.11□□□□□ -0.95
MSH6-211ENST00000606499 DCAF15Q66K64 600 aa9.11□□□□□ -0.95
MSH6-211ENST00000606499 TATDN1Q6P1N9 297 aa9.11□□□□□ -0.95
MSH6-211ENST00000606499 FOXP4Q8IVH2 680 aaPredicted RBP9.11□□□□□ -0.95
MSH6-211ENST00000606499 STAG1Q8WVM7 1258 aa9.11□□□□□ -0.95
MSH6-211ENST00000606499 HOOK2Q96ED9 719 aa9.11□□□□□ -0.95
MSH6-211ENST00000606499 WRNIP1Q96S55 665 aa9.11□□□□□ -0.95
MSH6-211ENST00000606499 ZNF341Q9BYN7 854 aa9.11□□□□□ -0.95
MSH6-211ENST00000606499 MKNK2Q9HBH9 465 aa9.11□□□□□ -0.95
MSH6-211ENST00000606499 TOMM22Q9NS69 142 aa9.11□□□□□ -0.95
MSH6-211ENST00000606499 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.11□□□□□ -0.95
MSH6-211ENST00000606499 SWAP70Q9UH65 585 aa9.11□□□□□ -0.95
MSH6-211ENST00000606499 MYH4Q9Y623 1939 aa9.11□□□□□ -0.95
MSH6-211ENST00000606499 B4E1Z4 1266 aa9.1□□□□□ -0.95
MSH6-211ENST00000606499 ORC4O43929 436 aa9.1□□□□□ -0.95
MSH6-211ENST00000606499 TBC1D12O60347 775 aa9.1□□□□□ -0.95
MSH6-211ENST00000606499 USP2O75604 605 aaPredicted RBP9.1□□□□□ -0.95
MSH6-211ENST00000606499 AKR1B1P15121 316 aa9.1□□□□□ -0.95
MSH6-211ENST00000606499 ZKSCAN1P17029 563 aaPredicted RBP9.1□□□□□ -0.95
MSH6-211ENST00000606499 PDE4BQ07343 736 aa9.1□□□□□ -0.95
MSH6-211ENST00000606499 TTLL12Q14166 644 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms