RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 SALL2Q9Y467 1007 aaPredicted RBP16.6■□□□□ 0.25
CTSA-212ENST00000606394 PDS5AQ29RF7 1337 aaKnown RBP16.6■□□□□ 0.25
CTSA-212ENST00000606394 MYH2Q9UKX2 1941 aa16.6■□□□□ 0.25
CTSA-212ENST00000606394 DDTLA6NHG4 134 aaPredicted RBP16.59■□□□□ 0.25
CTSA-212ENST00000606394 TREML2Q5T2D2 321 aa16.59■□□□□ 0.25
CTSA-212ENST00000606394 UBE2OQ9C0C9 1292 aaKnown RBP16.59■□□□□ 0.25
CTSA-212ENST00000606394 OSBPL5Q9H0X9 879 aaPredicted RBP16.59■□□□□ 0.25
CTSA-212ENST00000606394 CEP126Q9P2H0 1117 aa16.59■□□□□ 0.25
CTSA-212ENST00000606394 DNAH12Q6ZR08 3092 aa16.59■□□□□ 0.25
CTSA-212ENST00000606394 MAP4K4O95819 1239 aaPredicted RBP16.58■□□□□ 0.24
CTSA-212ENST00000606394 MAP3K21Q5TCX8 1036 aa16.58■□□□□ 0.24
CTSA-212ENST00000606394 SPTY2D1Q68D10 685 aaPredicted RBP16.58■□□□□ 0.24
CTSA-212ENST00000606394 DZIP1Q86YF9 867 aaKnown RBP16.58■□□□□ 0.24
CTSA-212ENST00000606394 ZNF280CQ8ND82 737 aa16.58■□□□□ 0.24
CTSA-212ENST00000606394 DDX60LQ5H9U9 1706 aaKnown RBP16.58■□□□□ 0.24
CTSA-212ENST00000606394 LOC285556D6RIA3 1793 aa16.58■□□□□ 0.24
CTSA-212ENST00000606394 XRCC5P13010 732 aaKnown RBP16.57■□□□□ 0.24
CTSA-212ENST00000606394 SYN1P17600 705 aa16.57■□□□□ 0.24
CTSA-212ENST00000606394 FAM109BQ6ICB4 259 aaPredicted RBP16.57■□□□□ 0.24
CTSA-212ENST00000606394 TRMT44Q8IYL2 757 aaKnown RBP16.57■□□□□ 0.24
CTSA-212ENST00000606394 DDX4Q9NQI0 724 aaKnown RBP16.57■□□□□ 0.24
CTSA-212ENST00000606394 MORF4L1Q9UBU8 362 aa16.57■□□□□ 0.24
CTSA-212ENST00000606394 COL2A1P02458 1487 aaPredicted RBP16.56■□□□□ 0.24
CTSA-212ENST00000606394 PHKA1P46020 1223 aa16.56■□□□□ 0.24
CTSA-212ENST00000606394 SPP2Q13103 211 aa16.56■□□□□ 0.24
CTSA-212ENST00000606394 SH3D19Q5HYK7 790 aa16.56■□□□□ 0.24
CTSA-212ENST00000606394 MRPL50Q8N5N7 158 aaKnown RBP16.56■□□□□ 0.24
CTSA-212ENST00000606394 SOCS4Q8WXH5 440 aa16.56■□□□□ 0.24
CTSA-212ENST00000606394 ASCC2Q9H1I8 757 aaPredicted RBP16.56■□□□□ 0.24
CTSA-212ENST00000606394 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.56■□□□□ 0.24
CTSA-212ENST00000606394 SPTBN5Q9NRC6 3674 aaKnown RBP16.56■□□□□ 0.24
CTSA-212ENST00000606394 MROH7-TTC4A0A0A0MT08 1334 aa16.55■□□□□ 0.24
CTSA-212ENST00000606394 COL6A1P12109 1028 aa16.55■□□□□ 0.24
CTSA-212ENST00000606394 IL15P40933 162 aaPredicted RBP16.55■□□□□ 0.24
CTSA-212ENST00000606394 BTDP43251 543 aa16.55■□□□□ 0.24
CTSA-212ENST00000606394 PICALMQ13492 652 aa16.55■□□□□ 0.24
CTSA-212ENST00000606394 TRIB2Q92519 343 aa16.55■□□□□ 0.24
CTSA-212ENST00000606394 COL25A1Q9BXS0 654 aaPredicted RBP16.55■□□□□ 0.24
CTSA-212ENST00000606394 PFASO15067 1338 aa16.54■□□□□ 0.24
CTSA-212ENST00000606394 GPR75-ASB3A0A0A6YYF3 556 aa16.54■□□□□ 0.24
CTSA-212ENST00000606394 USP17L5A8MUK1 530 aa16.54■□□□□ 0.24
CTSA-212ENST00000606394 POTEB2H3BUK9 544 aa16.54■□□□□ 0.24
CTSA-212ENST00000606394 HMGCS2P54868 508 aa16.54■□□□□ 0.24
CTSA-212ENST00000606394 TRIM32Q13049 653 aa16.54■□□□□ 0.24
CTSA-212ENST00000606394 CCDC102BQ68D86 513 aa16.54■□□□□ 0.24
CTSA-212ENST00000606394 CCDC84Q86UT8 332 aaPredicted RBP16.54■□□□□ 0.24
CTSA-212ENST00000606394 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.54■□□□□ 0.24
CTSA-212ENST00000606394 NUDT12Q9BQG2 462 aa16.54■□□□□ 0.24
CTSA-212ENST00000606394 AS3MTQ9HBK9 375 aa16.54■□□□□ 0.24
CTSA-212ENST00000606394 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.54■□□□□ 0.24
CTSA-212ENST00000606394 ABCF2Q9UG63 623 aa16.54■□□□□ 0.24
CTSA-212ENST00000606394 PRKAR2AP13861 404 aaKnown RBP16.53■□□□□ 0.24
CTSA-212ENST00000606394 CAP2P40123 477 aa16.53■□□□□ 0.24
CTSA-212ENST00000606394 RHBDL3P58872 404 aa16.53■□□□□ 0.24
CTSA-212ENST00000606394 RASGRF1Q13972 1273 aa16.53■□□□□ 0.24
CTSA-212ENST00000606394 SIL1Q9H173 461 aa16.53■□□□□ 0.24
CTSA-212ENST00000606394 HERC5Q9UII4 1024 aaKnown RBP16.53■□□□□ 0.24
CTSA-212ENST00000606394 HDAC5Q9UQL6 1122 aa16.53■□□□□ 0.24
CTSA-212ENST00000606394 TTC28Q96AY4 2481 aa16.53■□□□□ 0.24
CTSA-212ENST00000606394 PLXNB2O15031 1838 aa16.52■□□□□ 0.24
CTSA-212ENST00000606394 SLURP2P0DP57 97 aa16.52■□□□□ 0.24
CTSA-212ENST00000606394 HOXA7P31268 230 aaPredicted RBP16.52■□□□□ 0.24
CTSA-212ENST00000606394 WDR18Q9BV38 432 aa16.52■□□□□ 0.24
CTSA-212ENST00000606394 EYSQ5T1H1 3165 aa16.52■□□□□ 0.23
CTSA-212ENST00000606394 CYP2B6P20813 491 aa16.51■□□□□ 0.23
CTSA-212ENST00000606394 MAPK4P31152 587 aa16.51■□□□□ 0.23
CTSA-212ENST00000606394 IRX3P78415 501 aaPredicted RBP16.51■□□□□ 0.23
CTSA-212ENST00000606394 GSTO1P78417 241 aa16.51■□□□□ 0.23
CTSA-212ENST00000606394 PDE3AQ14432 1141 aa16.51■□□□□ 0.23
CTSA-212ENST00000606394 ERICH6Q7L0X2 663 aa16.51■□□□□ 0.23
CTSA-212ENST00000606394 GPRC5AQ8NFJ5 357 aa16.51■□□□□ 0.23
CTSA-212ENST00000606394 GTF3C2Q8WUA4 911 aaPredicted RBP16.51■□□□□ 0.23
CTSA-212ENST00000606394 PRUNE2Q8WUY3 3088 aa16.5■□□□□ 0.23
CTSA-212ENST00000606394 LDHCP07864 332 aa16.5■□□□□ 0.23
CTSA-212ENST00000606394 UBTFL1P0CB47 393 aaPredicted RBP16.5■□□□□ 0.23
CTSA-212ENST00000606394 ZKSCAN1P17029 563 aaPredicted RBP16.5■□□□□ 0.23
CTSA-212ENST00000606394 BACE1P56817 501 aa16.5■□□□□ 0.23
CTSA-212ENST00000606394 MECOMQ03112 1051 aa16.5■□□□□ 0.23
CTSA-212ENST00000606394 COPRSQ9NQ92 184 aa16.5■□□□□ 0.23
CTSA-212ENST00000606394 TMOD4Q9NZQ9 345 aa16.5■□□□□ 0.23
CTSA-212ENST00000606394 ATAD5Q96QE3 1844 aa16.49■□□□□ 0.23
CTSA-212ENST00000606394 FAM196BA6NMK8 535 aa16.49■□□□□ 0.23
CTSA-212ENST00000606394 C19orf81C9J6K1 198 aa16.49■□□□□ 0.23
CTSA-212ENST00000606394 ADORA1P30542 326 aa16.49■□□□□ 0.23
CTSA-212ENST00000606394 RGS2P41220 211 aa16.49■□□□□ 0.23
CTSA-212ENST00000606394 CACNB2Q08289 660 aaPredicted RBP16.49■□□□□ 0.23
CTSA-212ENST00000606394 LRRC26Q2I0M4 334 aa16.49■□□□□ 0.23
CTSA-212ENST00000606394 LHX8Q68G74 356 aa16.49■□□□□ 0.23
CTSA-212ENST00000606394 SSH1Q8WYL5 1049 aa16.49■□□□□ 0.23
CTSA-212ENST00000606394 USP6NLQ92738 828 aa16.49■□□□□ 0.23
CTSA-212ENST00000606394 GINM1Q9NU53 330 aa16.49■□□□□ 0.23
CTSA-212ENST00000606394 AKAP2Q9Y2D5 859 aa16.49■□□□□ 0.23
CTSA-212ENST00000606394 ZNF521Q96K83 1311 aa16.48■□□□□ 0.23
CTSA-212ENST00000606394 ASNSP08243 561 aa16.48■□□□□ 0.23
CTSA-212ENST00000606394 HERVK_113P62684 666 aa16.48■□□□□ 0.23
CTSA-212ENST00000606394 MVPQ14764 893 aaKnown RBP16.48■□□□□ 0.23
CTSA-212ENST00000606394 ERICH6BQ5W0A0 696 aa16.48■□□□□ 0.23
CTSA-212ENST00000606394 GUCD1Q96NT3 240 aa16.48■□□□□ 0.23
CTSA-212ENST00000606394 P2RX7Q99572 595 aaKnown RBP16.48■□□□□ 0.23
CTSA-212ENST00000606394 LBHD1Q9BQE6 289 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms