RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 HOXD11P31277 338 aaPredicted RBP6.67□□□□□ -1.34
COL4A3BP-207ENST00000604926 ITIH3Q06033 890 aa6.67□□□□□ -1.34
COL4A3BP-207ENST00000604926 LDLRAD1Q5T700 205 aa6.67□□□□□ -1.34
COL4A3BP-207ENST00000604926 SUN5Q8TC36 379 aa6.67□□□□□ -1.34
COL4A3BP-207ENST00000604926 LRRCC1Q9C099 1032 aa6.67□□□□□ -1.34
COL4A3BP-207ENST00000604926 LGR6Q9HBX8 967 aa6.67□□□□□ -1.34
COL4A3BP-207ENST00000604926 LRRFIP2Q9Y608 721 aaKnown RBP6.67□□□□□ -1.34
COL4A3BP-207ENST00000604926 CASZ1Q86V15 1759 aa6.67□□□□□ -1.34
COL4A3BP-207ENST00000604926 FOXN3O00409 490 aaPredicted RBP6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 POSTNQ15063 836 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 KIAA0825Q8IV33 1275 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 BICD2Q8TD16 824 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 ZNF483Q8TF39 744 aaPredicted RBP6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 RBM33Q96EV2 1170 aaKnown RBP6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 OSBPL10Q9BXB5 764 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 TNMDQ9H2S6 317 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 PLEKHA5Q9HAU0 1116 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 CAPN10Q9HC96 672 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 PPP4R2Q9NY27 417 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 POGKQ9P215 609 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 DISP3Q9P2K9 1392 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 TBKBP1A7MCY6 615 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 PLIN1O60240 522 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 HALP42357 657 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 USP4Q13107 963 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 MAP7D1Q3KQU3 841 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 ATP11CQ8NB49 1132 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 CCDC191Q8NCU4 936 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 E2F7Q96AV8 911 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 RBM17Q96I25 401 aaKnown RBP6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 SCHIP1Q9P0W5 487 aaPredicted RBP6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 LUZP4Q9P127 313 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 DHX57Q6P158 1386 aaKnown RBP6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 PIK3R4Q99570 1358 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 TOPAZ1Q8N9V7 1692 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 THSD7AQ9UPZ6 1657 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 MUSKO15146 869 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 PIP5K1CO60331 668 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 SNUPNO95149 360 aaKnown RBP6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 IDEP14735 1019 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 TRIM21P19474 475 aaKnown RBP6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 EIF4BP23588 611 aaKnown RBP6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 CCNCP24863 283 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 SCNN1AP37088 669 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 HNRNPH2P55795 449 aaKnown RBP6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 DMPKQ09013 629 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 GRM1Q13255 1194 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 SEPT7Q16181 437 aaKnown RBP6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 HNRNPUL2Q1KMD3 747 aaKnown RBP6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 TMCO5AQ8N6Q1 288 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 RNF214Q8ND24 703 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 HDAC7Q8WUI4 952 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 JPH3Q8WXH2 748 aaPredicted RBP6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 FAM167BQ9BTA0 163 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 TSPY26PQ9H489 355 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 PRKRIP1Q9H875 184 aaPredicted RBP6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 PSD3Q9NYI0 1048 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 MAPK8IP1Q9UQF2 711 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 SSX2IPQ9Y2D8 614 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 DAAM1Q9Y4D1 1078 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 MRFAP1Q9Y605 127 aa6.66□□□□□ -1.34
COL4A3BP-207ENST00000604926 ZNF189O75820 626 aaPredicted RBP6.65□□□□□ -1.34
COL4A3BP-207ENST00000604926 RCN1Q15293 331 aa6.65□□□□□ -1.34
COL4A3BP-207ENST00000604926 TERF2Q15554 542 aa6.65□□□□□ -1.34
COL4A3BP-207ENST00000604926 PHLDB3Q6NSJ2 640 aa6.65□□□□□ -1.34
COL4A3BP-207ENST00000604926 C14orf80Q86SX3 495 aa6.65□□□□□ -1.34
COL4A3BP-207ENST00000604926 HOOK3Q86VS8 718 aa6.65□□□□□ -1.34
COL4A3BP-207ENST00000604926 MIEF2Q96C03 454 aa6.65□□□□□ -1.34
COL4A3BP-207ENST00000604926 SLC30A1Q9Y6M5 507 aa6.65□□□□□ -1.34
COL4A3BP-207ENST00000604926 A0A1B0GUL7 405 aa6.65□□□□□ -1.35
COL4A3BP-207ENST00000604926 C2orf81A6NN90 581 aa6.65□□□□□ -1.35
COL4A3BP-207ENST00000604926 BHMG1C9JSJ3 638 aaPredicted RBP6.65□□□□□ -1.35
COL4A3BP-207ENST00000604926 RHOBTB3O94955 611 aa6.65□□□□□ -1.35
COL4A3BP-207ENST00000604926 NLRP12P59046 1061 aa6.65□□□□□ -1.35
COL4A3BP-207ENST00000604926 NUCB2P80303 420 aa6.65□□□□□ -1.35
COL4A3BP-207ENST00000604926 SNX1Q13596 522 aa6.65□□□□□ -1.35
COL4A3BP-207ENST00000604926 MGARPQ8TDB4 240 aa6.65□□□□□ -1.35
COL4A3BP-207ENST00000604926 OSBPL2Q9H1P3 480 aa6.65□□□□□ -1.35
COL4A3BP-207ENST00000604926 QPCTLQ9NXS2 382 aa6.65□□□□□ -1.35
COL4A3BP-207ENST00000604926 PPLO60437 1756 aa6.65□□□□□ -1.35
COL4A3BP-207ENST00000604926 ERVK-7P63135 1459 aa6.65□□□□□ -1.35
COL4A3BP-207ENST00000604926 RDXP35241 583 aaKnown RBP6.65□□□□□ -1.35
COL4A3BP-207ENST00000604926 SERPINB4P48594 390 aa6.65□□□□□ -1.35
COL4A3BP-207ENST00000604926 GUCY1B3Q02153 619 aa6.65□□□□□ -1.35
COL4A3BP-207ENST00000604926 CCDC173Q0VFZ6 552 aa6.65□□□□□ -1.35
COL4A3BP-207ENST00000604926 GRIK3Q13003 919 aa6.65□□□□□ -1.35
COL4A3BP-207ENST00000604926 SASS6Q6UVJ0 657 aa6.65□□□□□ -1.35
COL4A3BP-207ENST00000604926 C10orf67Q8IYJ2 551 aa6.65□□□□□ -1.35
COL4A3BP-207ENST00000604926 ZNF710Q8N1W2 664 aa6.65□□□□□ -1.35
COL4A3BP-207ENST00000604926 RPGRQ92834 1020 aaKnown RBP6.65□□□□□ -1.35
COL4A3BP-207ENST00000604926 ZBTB10Q96DT7 871 aa6.65□□□□□ -1.35
COL4A3BP-207ENST00000604926 ALPK1Q96QP1 1244 aa6.65□□□□□ -1.35
COL4A3BP-207ENST00000604926 FAM126AQ9BYI3 521 aaPredicted RBP6.65□□□□□ -1.35
COL4A3BP-207ENST00000604926 SPATS2LQ9NUQ6 558 aaKnown RBP6.65□□□□□ -1.35
COL4A3BP-207ENST00000604926 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.65□□□□□ -1.35
COL4A3BP-207ENST00000604926 CDC42BPGQ6DT37 1551 aa6.64□□□□□ -1.35
COL4A3BP-207ENST00000604926 BTBD11A6QL63 1104 aa6.64□□□□□ -1.35
COL4A3BP-207ENST00000604926 KRT18P05783 430 aaKnown RBP6.64□□□□□ -1.35
COL4A3BP-207ENST00000604926 VPS72Q15906 364 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms