RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, human

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN12-211	ENST00000601685	CEP112	Q8N8E3	955 aa		18.95	■□□□□ 0.62
CAPN12-211	ENST00000601685	ZSWIM4	Q9H7M6	989 aa		18.95	■□□□□ 0.62
CAPN12-211	ENST00000601685	SAMSN1	Q9NSI8	373 aa	Known RBP	18.95	■□□□□ 0.62
CAPN12-211	ENST00000601685	CDC23	Q9UJX2	597 aa		18.95	■□□□□ 0.62
CAPN12-211	ENST00000601685	ADGRG1	Q9Y653	693 aa		18.95	■□□□□ 0.62
CAPN12-211	ENST00000601685	ABCC12	Q96J65	1359 aa		18.95	■□□□□ 0.62
CAPN12-211	ENST00000601685	MICU3	Q86XE3	530 aa		18.94	■□□□□ 0.62
CAPN12-211	ENST00000601685	MSL3	Q8N5Y2	521 aa	Known RBP	18.94	■□□□□ 0.62
CAPN12-211	ENST00000601685	MSANTD4	Q8NCY6	345 aa		18.94	■□□□□ 0.62
CAPN12-211	ENST00000601685	TEX13A	Q9BXU3	409 aa	Predicted RBP	18.94	■□□□□ 0.62
CAPN12-211	ENST00000601685	SENP2	Q9HC62	589 aa		18.94	■□□□□ 0.62
CAPN12-211	ENST00000601685	SERTAD1	Q9UHV2	236 aa		18.94	■□□□□ 0.62
CAPN12-211	ENST00000601685	ZBTB43	O43298	467 aa		18.94	■□□□□ 0.62
CAPN12-211	ENST00000601685	ZNF827	Q17R98	1081 aa		18.94	■□□□□ 0.62
CAPN12-211	ENST00000601685	UBN2	Q6ZU65	1347 aa		18.94	■□□□□ 0.62
CAPN12-211	ENST00000601685	PKD1L3	Q7Z443	1732 aa		18.94	■□□□□ 0.62
CAPN12-211	ENST00000601685	ACTN2	P35609	894 aa		18.93	■□□□□ 0.62
CAPN12-211	ENST00000601685	RAD9B	Q6WBX8	426 aa		18.93	■□□□□ 0.62
CAPN12-211	ENST00000601685	HDX	Q7Z353	690 aa		18.93	■□□□□ 0.62
CAPN12-211	ENST00000601685	TMEM87B	Q96K49	555 aa		18.93	■□□□□ 0.62
CAPN12-211	ENST00000601685	NAA15	Q9BXJ9	866 aa	Known RBP	18.93	■□□□□ 0.62
CAPN12-211	ENST00000601685	RASSF4	Q9H2L5	321 aa		18.93	■□□□□ 0.62
CAPN12-211	ENST00000601685	LZTFL1	Q9NQ48	299 aa		18.93	■□□□□ 0.62
CAPN12-211	ENST00000601685	FAM217B	Q9NTX9	383 aa	Predicted RBP	18.93	■□□□□ 0.62
CAPN12-211	ENST00000601685	FBXO2	Q9UK22	296 aa	Predicted RBP	18.93	■□□□□ 0.62
CAPN12-211	ENST00000601685	NUP188	Q5SRE5	1749 aa		18.93	■□□□□ 0.62
CAPN12-211	ENST00000601685	MYO1C	O00159	1063 aa		18.93	■□□□□ 0.62
CAPN12-211	ENST00000601685	POLR2D	O15514	142 aa	Known RBP	18.93	■□□□□ 0.62
CAPN12-211	ENST00000601685	PTPRE	P23469	700 aa		18.93	■□□□□ 0.62
CAPN12-211	ENST00000601685	TUBB2A	Q13885	445 aa		18.93	■□□□□ 0.62
CAPN12-211	ENST00000601685	NOSTRIN	Q8IVI9	506 aa		18.93	■□□□□ 0.62
CAPN12-211	ENST00000601685	TUBB2B	Q9BVA1	445 aa		18.93	■□□□□ 0.62
CAPN12-211	ENST00000601685	PDE11A	Q9HCR9	933 aa		18.93	■□□□□ 0.62
CAPN12-211	ENST00000601685	PUF60	Q9UHX1	559 aa	Known RBP	18.93	■□□□□ 0.62
CAPN12-211	ENST00000601685	STK36	Q9NRP7	1315 aa		18.93	■□□□□ 0.62
CAPN12-211	ENST00000601685	GOLGA8A	A7E2F4	631 aa		18.92	■□□□□ 0.62
CAPN12-211	ENST00000601685	KIF5C	O60282	957 aa		18.92	■□□□□ 0.62
CAPN12-211	ENST00000601685	ERCC5	P28715	1186 aa	Predicted RBP	18.92	■□□□□ 0.62
CAPN12-211	ENST00000601685	GRIN1	Q05586	938 aa		18.92	■□□□□ 0.62
CAPN12-211	ENST00000601685	LCMT1	Q9UIC8	334 aa		18.92	■□□□□ 0.62
CAPN12-211	ENST00000601685	FBXO3	Q9UK99	471 aa		18.92	■□□□□ 0.62
CAPN12-211	ENST00000601685	TOB1	P50616	345 aa	Predicted RBP	18.92	■□□□□ 0.62
CAPN12-211	ENST00000601685	PLCD1	P51178	756 aa		18.92	■□□□□ 0.62
CAPN12-211	ENST00000601685	TUBB4B	P68371	445 aa		18.92	■□□□□ 0.62
CAPN12-211	ENST00000601685	PI16	Q6UXB8	463 aa		18.92	■□□□□ 0.62
CAPN12-211	ENST00000601685	IGDCC4	Q8TDY8	1250 aa		18.92	■□□□□ 0.62
CAPN12-211	ENST00000601685		B4E1Z4	1266 aa		18.91	■□□□□ 0.62
CAPN12-211	ENST00000601685	CCDC57	Q2TAC2	916 aa		18.91	■□□□□ 0.62
CAPN12-211	ENST00000601685	SLC9C2	Q5TAH2	1124 aa		18.91	■□□□□ 0.62
CAPN12-211	ENST00000601685	IPO4	Q8TEX9	1081 aa	Known RBP	18.91	■□□□□ 0.62
CAPN12-211	ENST00000601685	PNKP	Q96T60	521 aa		18.91	■□□□□ 0.62
CAPN12-211	ENST00000601685	ADAMTSL3	P82987	1691 aa		18.91	■□□□□ 0.62
CAPN12-211	ENST00000601685	UBE2Q2L	H0YL09	131 aa		18.91	■□□□□ 0.62
CAPN12-211	ENST00000601685	TEX33	O43247	280 aa		18.91	■□□□□ 0.62
CAPN12-211	ENST00000601685	ERLIN1	O75477	346 aa		18.91	■□□□□ 0.62
CAPN12-211	ENST00000601685	MCM6	Q14566	821 aa		18.91	■□□□□ 0.62
CAPN12-211	ENST00000601685	APTX	Q7Z2E3	356 aa	Known RBP	18.91	■□□□□ 0.62
CAPN12-211	ENST00000601685	SRL	Q86TD4	932 aa		18.91	■□□□□ 0.62
CAPN12-211	ENST00000601685	SGMS1	Q86VZ5	419 aa		18.91	■□□□□ 0.62
CAPN12-211	ENST00000601685	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	18.91	■□□□□ 0.62
CAPN12-211	ENST00000601685	VPS18	Q9P253	973 aa		18.91	■□□□□ 0.62
CAPN12-211	ENST00000601685	L1RE1	Q9UN81	338 aa		18.91	■□□□□ 0.62
CAPN12-211	ENST00000601685		A0A0U1RQJ8	604 aa		18.9	■□□□□ 0.62
CAPN12-211	ENST00000601685	ADD2	P35612	726 aa		18.9	■□□□□ 0.62
CAPN12-211	ENST00000601685	SSRP1	Q08945	709 aa	Known RBP	18.9	■□□□□ 0.62
CAPN12-211	ENST00000601685	RBL2	Q08999	1139 aa		18.9	■□□□□ 0.62
CAPN12-211	ENST00000601685	NFXL1	Q6ZNB6	911 aa		18.9	■□□□□ 0.62
CAPN12-211	ENST00000601685	PPFIBP1	Q86W92	1011 aa		18.9	■□□□□ 0.62
CAPN12-211	ENST00000601685	GRAMD1C	Q8IYS0	662 aa		18.9	■□□□□ 0.62
CAPN12-211	ENST00000601685	ZNF579	Q8NAF0	562 aa	Known RBP	18.9	■□□□□ 0.62
CAPN12-211	ENST00000601685	SPATA20	Q8TB22	786 aa		18.9	■□□□□ 0.62
CAPN12-211	ENST00000601685	ATRIP	Q8WXE1	791 aa		18.9	■□□□□ 0.62
CAPN12-211	ENST00000601685	SLC26A6	Q9BXS9	759 aa		18.9	■□□□□ 0.62
CAPN12-211	ENST00000601685	LY9	Q9HBG7	655 aa		18.9	■□□□□ 0.62
CAPN12-211	ENST00000601685	MYH7	P12883	1935 aa		18.9	■□□□□ 0.62
CAPN12-211	ENST00000601685	BTBD18	B2RXH4	712 aa		18.9	■□□□□ 0.62
CAPN12-211	ENST00000601685	ACTN4	O43707	911 aa	Known RBP	18.9	■□□□□ 0.62
CAPN12-211	ENST00000601685	KANK3	Q6NY19	840 aa		18.9	■□□□□ 0.62
CAPN12-211	ENST00000601685	RASGRP2	Q7LDG7	609 aa		18.9	■□□□□ 0.62
CAPN12-211	ENST00000601685	IGSF22	Q8N9C0	903 aa		18.9	■□□□□ 0.62
CAPN12-211	ENST00000601685	PLEKHG2	Q9H7P9	1386 aa		18.9	■□□□□ 0.62
CAPN12-211	ENST00000601685	TRIM66	O15016	1216 aa		18.89	■□□□□ 0.62
CAPN12-211	ENST00000601685	EIF3J	O75822	258 aa	Known RBP	18.89	■□□□□ 0.62
CAPN12-211	ENST00000601685	FMNL1	O95466	1100 aa	Predicted RBP	18.89	■□□□□ 0.62
CAPN12-211	ENST00000601685	MMP1	P03956	469 aa		18.89	■□□□□ 0.62
CAPN12-211	ENST00000601685	PBX1	P40424	430 aa		18.89	■□□□□ 0.62
CAPN12-211	ENST00000601685	ZNF569	Q5MCW4	686 aa		18.89	■□□□□ 0.62
CAPN12-211	ENST00000601685	CCDC85A	Q96PX6	553 aa	Predicted RBP	18.89	■□□□□ 0.62
CAPN12-211	ENST00000601685	MYL10	Q9BUA6	226 aa		18.89	■□□□□ 0.62
CAPN12-211	ENST00000601685	ABCB6	Q9NP58	842 aa		18.89	■□□□□ 0.62
CAPN12-211	ENST00000601685	CT47A1	Q5JQC4	288 aa	Predicted RBP	18.89	■□□□□ 0.61
CAPN12-211	ENST00000601685	LEKR1	Q6ZMV7	388 aa		18.89	■□□□□ 0.61
CAPN12-211	ENST00000601685	C10orf67	Q8IYJ2	551 aa		18.89	■□□□□ 0.61
CAPN12-211	ENST00000601685	WASF1	Q92558	559 aa		18.89	■□□□□ 0.61
CAPN12-211	ENST00000601685	SEC31B	Q9NQW1	1179 aa		18.89	■□□□□ 0.61
CAPN12-211	ENST00000601685	ATRN	O75882	1429 aa		18.89	■□□□□ 0.61
CAPN12-211	ENST00000601685	MAPK8IP2	Q13387	824 aa	Predicted RBP	18.88	■□□□□ 0.61
CAPN12-211	ENST00000601685	SAFB	Q15424	915 aa	Known RBP eCLIP	18.88	■□□□□ 0.61
CAPN12-211	ENST00000601685	KIF4B	Q2VIQ3	1234 aa		18.88	■□□□□ 0.61
CAPN12-211	ENST00000601685	RILPL1	Q5EBL4	403 aa		18.88	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms