RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 MAPKAPK5Q8IW41 473 aa21.56■■□□□ 1.04
SHKBP1-223ENST00000600552 GABRQQ9UN88 632 aa21.56■■□□□ 1.04
SHKBP1-223ENST00000600552 BAG3O95817 575 aa21.55■■□□□ 1.04
SHKBP1-223ENST00000600552 ZAP70P43403 619 aa21.55■■□□□ 1.04
SHKBP1-223ENST00000600552 TREML2Q5T2D2 321 aa21.55■■□□□ 1.04
SHKBP1-223ENST00000600552 TGFBRAP1Q8WUH2 860 aa21.55■■□□□ 1.04
SHKBP1-223ENST00000600552 GPR108Q9NPR9 543 aa21.55■■□□□ 1.04
SHKBP1-223ENST00000600552 TBC1D12O60347 775 aa21.54■■□□□ 1.04
SHKBP1-223ENST00000600552 MAP4K4O95819 1239 aaPredicted RBP21.54■■□□□ 1.04
SHKBP1-223ENST00000600552 CYP2E1P05181 493 aaPredicted RBP21.54■■□□□ 1.04
SHKBP1-223ENST00000600552 RRP1BQ14684 758 aaKnown RBP21.54■■□□□ 1.04
SHKBP1-223ENST00000600552 ANKRD13CQ8N6S4 541 aa21.54■■□□□ 1.04
SHKBP1-223ENST00000600552 TRIM34Q9BYJ4 488 aa21.54■■□□□ 1.04
SHKBP1-223ENST00000600552 SAP30BPQ9UHR5 308 aaKnown RBP21.54■■□□□ 1.04
SHKBP1-223ENST00000600552 TNPO2O14787 897 aaKnown RBP21.53■■□□□ 1.04
SHKBP1-223ENST00000600552 NPM3O75607 178 aaKnown RBP21.53■■□□□ 1.04
SHKBP1-223ENST00000600552 HMGCS2P54868 508 aa21.53■■□□□ 1.04
SHKBP1-223ENST00000600552 PANK1Q8TE04 598 aa21.53■■□□□ 1.04
SHKBP1-223ENST00000600552 GCC1Q96CN9 775 aa21.53■■□□□ 1.04
SHKBP1-223ENST00000600552 RNF208Q9H0X6 261 aa21.53■■□□□ 1.04
SHKBP1-223ENST00000600552 PIH1D3Q9NQM4 214 aaKnown RBP21.53■■□□□ 1.04
SHKBP1-223ENST00000600552 TLR7Q9NYK1 1049 aaKnown RBP21.53■■□□□ 1.04
SHKBP1-223ENST00000600552 AGTPBP1Q9UPW5 1226 aa21.53■■□□□ 1.04
SHKBP1-223ENST00000600552 PHIPQ8WWQ0 1821 aa21.52■■□□□ 1.04
SHKBP1-223ENST00000600552 MGAMO43451 1857 aa21.52■■□□□ 1.04
SHKBP1-223ENST00000600552 ZBTB7BO15156 539 aaPredicted RBP21.52■■□□□ 1.04
SHKBP1-223ENST00000600552 CCL5P13501 91 aa21.52■■□□□ 1.04
SHKBP1-223ENST00000600552 CAP2P40123 477 aa21.52■■□□□ 1.04
SHKBP1-223ENST00000600552 ADGRA1Q86SQ6 560 aa21.52■■□□□ 1.04
SHKBP1-223ENST00000600552 CRACR2BQ8N4Y2 399 aaPredicted RBP21.52■■□□□ 1.04
SHKBP1-223ENST00000600552 ZNF280CQ8ND82 737 aa21.52■■□□□ 1.04
SHKBP1-223ENST00000600552 DBNLQ9UJU6 430 aaKnown RBP21.52■■□□□ 1.04
SHKBP1-223ENST00000600552 NDUFB9Q9Y6M9 179 aa21.52■■□□□ 1.04
SHKBP1-223ENST00000600552 PTPRFP10586 1907 aa21.52■■□□□ 1.04
SHKBP1-223ENST00000600552 MYO5AQ9Y4I1 1855 aaKnown RBP21.52■■□□□ 1.03
SHKBP1-223ENST00000600552 ELNP15502 786 aa21.51■■□□□ 1.03
SHKBP1-223ENST00000600552 PLCG2P16885 1265 aa21.51■■□□□ 1.03
SHKBP1-223ENST00000600552 CYP7A1P22680 504 aa21.51■■□□□ 1.03
SHKBP1-223ENST00000600552 DYNLL1P63167 89 aaKnown RBP21.51■■□□□ 1.03
SHKBP1-223ENST00000600552 UBXN2AP68543 259 aa21.51■■□□□ 1.03
SHKBP1-223ENST00000600552 PI4KBQ9UBF8 816 aa21.51■■□□□ 1.03
SHKBP1-223ENST00000600552 PALD1Q9ULE6 856 aa21.51■■□□□ 1.03
SHKBP1-223ENST00000600552 SLC45A1Q9Y2W3 748 aa21.51■■□□□ 1.03
SHKBP1-223ENST00000600552 USP17L5A8MUK1 530 aa21.5■■□□□ 1.03
SHKBP1-223ENST00000600552 ADCY3O60266 1144 aa21.5■■□□□ 1.03
SHKBP1-223ENST00000600552 IDH1O75874 414 aaKnown RBP21.5■■□□□ 1.03
SHKBP1-223ENST00000600552 FLT3LGP49771 235 aa21.5■■□□□ 1.03
SHKBP1-223ENST00000600552 EAF2Q96CJ1 260 aaPredicted RBP21.5■■□□□ 1.03
SHKBP1-223ENST00000600552 PNMA3Q9UL41 463 aa21.5■■□□□ 1.03
SHKBP1-223ENST00000600552 EXOC6BQ9Y2D4 811 aa21.5■■□□□ 1.03
SHKBP1-223ENST00000600552 ATAD5Q96QE3 1844 aa21.5■■□□□ 1.03
SHKBP1-223ENST00000600552 APBB1O00213 710 aa21.49■■□□□ 1.03
SHKBP1-223ENST00000600552 GDF11O95390 407 aa21.49■■□□□ 1.03
SHKBP1-223ENST00000600552 MIGA1Q8NAN2 632 aa21.49■■□□□ 1.03
SHKBP1-223ENST00000600552 DPF3Q92784 378 aa21.49■■□□□ 1.03
SHKBP1-223ENST00000600552 UNC93B1Q9H1C4 597 aa21.49■■□□□ 1.03
SHKBP1-223ENST00000600552 AS3MTQ9HBK9 375 aa21.49■■□□□ 1.03
SHKBP1-223ENST00000600552 HERC5Q9UII4 1024 aaKnown RBP21.49■■□□□ 1.03
SHKBP1-223ENST00000600552 NOP58Q9Y2X3 529 aaKnown RBP21.49■■□□□ 1.03
SHKBP1-223ENST00000600552 PPP4CP60510 307 aa21.48■■□□□ 1.03
SHKBP1-223ENST00000600552 HABP4Q5JVS0 413 aaKnown RBP21.48■■□□□ 1.03
SHKBP1-223ENST00000600552 PROCA1Q8NCQ7 364 aaPredicted RBP21.48■■□□□ 1.03
SHKBP1-223ENST00000600552 SLAIN1Q8ND83 568 aa21.48■■□□□ 1.03
SHKBP1-223ENST00000600552 COA7Q96BR5 231 aa21.48■■□□□ 1.03
SHKBP1-223ENST00000600552 DHX36Q9H2U1 1008 aaKnown RBP21.48■■□□□ 1.03
SHKBP1-223ENST00000600552 FLT1P17948 1338 aa21.48■■□□□ 1.03
SHKBP1-223ENST00000600552 MKI67P46013 3256 aaKnown RBP21.47■■□□□ 1.03
SHKBP1-223ENST00000600552 PABPC4Q13310 644 aaKnown RBP eCLIP21.47■■□□□ 1.03
SHKBP1-223ENST00000600552 MTMR2Q13614 643 aa21.47■■□□□ 1.03
SHKBP1-223ENST00000600552 SHROOM1Q2M3G4 852 aaPredicted RBP21.47■■□□□ 1.03
SHKBP1-223ENST00000600552 CEP85Q6P2H3 762 aa21.47■■□□□ 1.03
SHKBP1-223ENST00000600552 AACSQ86V21 672 aa21.47■■□□□ 1.03
SHKBP1-223ENST00000600552 SHISA4Q96DD7 197 aa21.47■■□□□ 1.03
SHKBP1-223ENST00000600552 DOCK3Q8IZD9 2030 aa21.46■■□□□ 1.03
SHKBP1-223ENST00000600552 COL2A1P02458 1487 aaPredicted RBP21.46■■□□□ 1.03
SHKBP1-223ENST00000600552 HLA-DOAP06340 250 aa21.46■■□□□ 1.03
SHKBP1-223ENST00000600552 USP5P45974 858 aa21.46■■□□□ 1.03
SHKBP1-223ENST00000600552 JAG1P78504 1218 aa21.46■■□□□ 1.03
SHKBP1-223ENST00000600552 MAGEB6Q8N7X4 407 aa21.46■■□□□ 1.03
SHKBP1-223ENST00000600552 NKX2-3Q8TAU0 364 aa21.46■■□□□ 1.03
SHKBP1-223ENST00000600552 ASCC2Q9H1I8 757 aaPredicted RBP21.46■■□□□ 1.03
SHKBP1-223ENST00000600552 IL1RAPL2Q9NP60 686 aa21.46■■□□□ 1.03
SHKBP1-223ENST00000600552 TMOD4Q9NZQ9 345 aa21.46■■□□□ 1.03
SHKBP1-223ENST00000600552 H0YGN5 161 aa21.45■■□□□ 1.02
SHKBP1-223ENST00000600552 INHAP05111 366 aa21.45■■□□□ 1.02
SHKBP1-223ENST00000600552 GJB1P08034 283 aa21.45■■□□□ 1.02
SHKBP1-223ENST00000600552 FOXP4Q8IVH2 680 aaPredicted RBP21.45■■□□□ 1.02
SHKBP1-223ENST00000600552 ZNF512BQ96KM6 892 aaPredicted RBP21.45■■□□□ 1.02
SHKBP1-223ENST00000600552 ANTXR1Q9H6X2 564 aa21.45■■□□□ 1.02
SHKBP1-223ENST00000600552 MAST2Q6P0Q8 1798 aa21.45■■□□□ 1.02
SHKBP1-223ENST00000600552 CDK5RAP2Q96SN8 1893 aa21.44■■□□□ 1.02
SHKBP1-223ENST00000600552 TFRCP02786 760 aaKnown RBP21.44■■□□□ 1.02
SHKBP1-223ENST00000600552 ASNSP08243 561 aa21.44■■□□□ 1.02
SHKBP1-223ENST00000600552 GJA8P48165 433 aa21.44■■□□□ 1.02
SHKBP1-223ENST00000600552 IRX3P78415 501 aaPredicted RBP21.44■■□□□ 1.02
SHKBP1-223ENST00000600552 TBC1D2Q9BYX2 928 aa21.44■■□□□ 1.02
SHKBP1-223ENST00000600552 DNAJC18Q9H819 358 aa21.44■■□□□ 1.02
SHKBP1-223ENST00000600552 PEX10O60683 326 aa21.43■■□□□ 1.02
SHKBP1-223ENST00000600552 FAM110CQ1W6H9 321 aa21.43■■□□□ 1.02
SHKBP1-223ENST00000600552 ERC1Q8IUD2 1116 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms