RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 PTPRAP18433 802 aa16.3■□□□□ 0.2
ARHGEF1-222ENST00000600517 USP5P45974 858 aa16.3■□□□□ 0.2
ARHGEF1-222ENST00000600517 UBE3CQ15386 1083 aa16.3■□□□□ 0.2
ARHGEF1-222ENST00000600517 ZNF296Q8WUU4 475 aaPredicted RBP16.3■□□□□ 0.2
ARHGEF1-222ENST00000600517 ZHX2Q9Y6X8 837 aa16.3■□□□□ 0.2
ARHGEF1-222ENST00000600517 MYO5AQ9Y4I1 1855 aaKnown RBP16.3■□□□□ 0.2
ARHGEF1-222ENST00000600517 DOCK2Q92608 1830 aa16.3■□□□□ 0.2
ARHGEF1-222ENST00000600517 CAP2P40123 477 aa16.29■□□□□ 0.2
ARHGEF1-222ENST00000600517 TSHZ3Q63HK5 1081 aa16.29■□□□□ 0.2
ARHGEF1-222ENST00000600517 ZSCAN25Q6NSZ9 544 aa16.29■□□□□ 0.2
ARHGEF1-222ENST00000600517 FAM43AQ8N2R8 423 aa16.29■□□□□ 0.2
ARHGEF1-222ENST00000600517 OTUD7AQ8TE49 926 aaPredicted RBP16.29■□□□□ 0.2
ARHGEF1-222ENST00000600517 CRNKL1Q9BZJ0 848 aaKnown RBP16.29■□□□□ 0.2
ARHGEF1-222ENST00000600517 ZCCHC17Q9NP64 241 aaKnown RBP16.29■□□□□ 0.2
ARHGEF1-222ENST00000600517 SAP30BPQ9UHR5 308 aaKnown RBP16.29■□□□□ 0.2
ARHGEF1-222ENST00000600517 LAMB1P07942 1786 aa16.28■□□□□ 0.2
ARHGEF1-222ENST00000600517 AK9Q5TCS8 1911 aa16.28■□□□□ 0.2
ARHGEF1-222ENST00000600517 ERC2O15083 957 aa16.28■□□□□ 0.2
ARHGEF1-222ENST00000600517 HLA-DOAP06340 250 aa16.28■□□□□ 0.2
ARHGEF1-222ENST00000600517 CRHR2Q13324 411 aa16.28■□□□□ 0.2
ARHGEF1-222ENST00000600517 RRP1BQ14684 758 aaKnown RBP16.28■□□□□ 0.2
ARHGEF1-222ENST00000600517 SLFNL1Q499Z3 407 aa16.28■□□□□ 0.2
ARHGEF1-222ENST00000600517 TTC6Q86TZ1 520 aa16.28■□□□□ 0.2
ARHGEF1-222ENST00000600517 KBTBD3Q8NAB2 608 aa16.28■□□□□ 0.2
ARHGEF1-222ENST00000600517 PI4K2BQ8TCG2 481 aa16.28■□□□□ 0.2
ARHGEF1-222ENST00000600517 ZBTB47Q9UFB7 747 aaPredicted RBP16.28■□□□□ 0.2
ARHGEF1-222ENST00000600517 AFG3L2Q9Y4W6 797 aa16.28■□□□□ 0.2
ARHGEF1-222ENST00000600517 SALL3Q9BXA9 1300 aa16.27■□□□□ 0.2
ARHGEF1-222ENST00000600517 BTBD19C9JJ37 291 aa16.27■□□□□ 0.2
ARHGEF1-222ENST00000600517 FKTNO75072 461 aa16.27■□□□□ 0.2
ARHGEF1-222ENST00000600517 GLRX3O76003 335 aaKnown RBP16.27■□□□□ 0.2
ARHGEF1-222ENST00000600517 IGHDP01880 384 aa16.27■□□□□ 0.2
ARHGEF1-222ENST00000600517 CHGBP05060 677 aa16.27■□□□□ 0.2
ARHGEF1-222ENST00000600517 MX1P20591 662 aa16.27■□□□□ 0.2
ARHGEF1-222ENST00000600517 MOGSQ13724 837 aa16.27■□□□□ 0.2
ARHGEF1-222ENST00000600517 SMC5Q8IY18 1101 aa16.27■□□□□ 0.2
ARHGEF1-222ENST00000600517 LCORLQ8N3X6 602 aa16.27■□□□□ 0.2
ARHGEF1-222ENST00000600517 CRACR2BQ8N4Y2 399 aaPredicted RBP16.27■□□□□ 0.2
ARHGEF1-222ENST00000600517 DNAJC18Q9H819 358 aa16.27■□□□□ 0.2
ARHGEF1-222ENST00000600517 ARMT1Q9H993 441 aa16.27■□□□□ 0.2
ARHGEF1-222ENST00000600517 DGKZQ13574 1117 aa16.26■□□□□ 0.19
ARHGEF1-222ENST00000600517 TAF1CQ15572 869 aaPredicted RBP16.26■□□□□ 0.19
ARHGEF1-222ENST00000600517 ANKRD23Q86SG2 305 aa16.26■□□□□ 0.19
ARHGEF1-222ENST00000600517 MCOLN1Q9GZU1 580 aa16.26■□□□□ 0.19
ARHGEF1-222ENST00000600517 EHD4Q9H223 541 aa16.26■□□□□ 0.19
ARHGEF1-222ENST00000600517 ZFYVE28Q9HCC9 887 aa16.26■□□□□ 0.19
ARHGEF1-222ENST00000600517 STAP2Q9UGK3 403 aa16.26■□□□□ 0.19
ARHGEF1-222ENST00000600517 CASP8AP2Q9UKL3 1982 aa16.26■□□□□ 0.19
ARHGEF1-222ENST00000600517 A0A0G2JLL6 359 aaPredicted RBP16.25■□□□□ 0.19
ARHGEF1-222ENST00000600517 MBD4O95243 580 aa16.25■□□□□ 0.19
ARHGEF1-222ENST00000600517 TATDN1Q6P1N9 297 aa16.25■□□□□ 0.19
ARHGEF1-222ENST00000600517 PRRT2Q7Z6L0 340 aaPredicted RBP16.25■□□□□ 0.19
ARHGEF1-222ENST00000600517 CTU1Q7Z7A3 348 aaKnown RBP16.25■□□□□ 0.19
ARHGEF1-222ENST00000600517 TRIM34Q9BYJ4 488 aa16.25■□□□□ 0.19
ARHGEF1-222ENST00000600517 TBC1D2Q9BYX2 928 aa16.25■□□□□ 0.19
ARHGEF1-222ENST00000600517 DCP1AQ9NPI6 582 aaPredicted RBP16.25■□□□□ 0.19
ARHGEF1-222ENST00000600517 ATP8A2Q9NTI2 1148 aa16.25■□□□□ 0.19
ARHGEF1-222ENST00000600517 GINM1Q9NU53 330 aa16.25■□□□□ 0.19
ARHGEF1-222ENST00000600517 SERPINB13Q9UIV8 391 aa16.25■□□□□ 0.19
ARHGEF1-222ENST00000600517 USP17L5A8MUK1 530 aa16.24■□□□□ 0.19
ARHGEF1-222ENST00000600517 RNF113AO15541 343 aaKnown RBP16.24■□□□□ 0.19
ARHGEF1-222ENST00000600517 PRKAB2O43741 272 aa16.24■□□□□ 0.19
ARHGEF1-222ENST00000600517 ASNSP08243 561 aa16.24■□□□□ 0.19
ARHGEF1-222ENST00000600517 PLCD1P51178 756 aa16.24■□□□□ 0.19
ARHGEF1-222ENST00000600517 JAG1P78504 1218 aa16.24■□□□□ 0.19
ARHGEF1-222ENST00000600517 SLC4A8Q2Y0W8 1093 aa16.24■□□□□ 0.19
ARHGEF1-222ENST00000600517 GPAT2Q6NUI2 795 aa16.24■□□□□ 0.19
ARHGEF1-222ENST00000600517 FASTKD5Q7L8L6 764 aaKnown RBP16.24■□□□□ 0.19
ARHGEF1-222ENST00000600517 CCDC84Q86UT8 332 aaPredicted RBP16.24■□□□□ 0.19
ARHGEF1-222ENST00000600517 SDR42E1Q8WUS8 393 aa16.24■□□□□ 0.19
ARHGEF1-222ENST00000600517 ABHD8Q96I13 439 aa16.24■□□□□ 0.19
ARHGEF1-222ENST00000600517 PUS7LQ9H0K6 701 aaKnown RBP16.24■□□□□ 0.19
ARHGEF1-222ENST00000600517 MCM9Q9NXL9 1143 aa16.24■□□□□ 0.19
ARHGEF1-222ENST00000600517 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.24■□□□□ 0.19
ARHGEF1-222ENST00000600517 PDHXO00330 501 aa16.23■□□□□ 0.19
ARHGEF1-222ENST00000600517 TLR2O60603 784 aa16.23■□□□□ 0.19
ARHGEF1-222ENST00000600517 POLR3DP05423 398 aaPredicted RBP16.23■□□□□ 0.19
ARHGEF1-222ENST00000600517 ZFYP08048 801 aaPredicted RBP16.23■□□□□ 0.19
ARHGEF1-222ENST00000600517 PDE1AP54750 535 aa16.23■□□□□ 0.19
ARHGEF1-222ENST00000600517 SPP2Q13103 211 aa16.23■□□□□ 0.19
ARHGEF1-222ENST00000600517 LRRFIP1Q32MZ4 808 aaKnown RBP16.23■□□□□ 0.19
ARHGEF1-222ENST00000600517 ZNF280CQ8ND82 737 aa16.23■□□□□ 0.19
ARHGEF1-222ENST00000600517 WDR18Q9BV38 432 aa16.23■□□□□ 0.19
ARHGEF1-222ENST00000600517 FOCADQ5VW36 1801 aa16.22■□□□□ 0.19
ARHGEF1-222ENST00000600517 TRIM75PA6NK02 468 aa16.22■□□□□ 0.19
ARHGEF1-222ENST00000600517 SP3Q02447 781 aa16.22■□□□□ 0.19
ARHGEF1-222ENST00000600517 GABPAQ06546 454 aa16.22■□□□□ 0.19
ARHGEF1-222ENST00000600517 PKN2Q16513 984 aaKnown RBP16.22■□□□□ 0.19
ARHGEF1-222ENST00000600517 APPBP2Q92624 585 aa16.22■□□□□ 0.19
ARHGEF1-222ENST00000600517 STRBPQ96SI9 672 aaKnown RBP16.22■□□□□ 0.19
ARHGEF1-222ENST00000600517 AS3MTQ9HBK9 375 aa16.22■□□□□ 0.19
ARHGEF1-222ENST00000600517 TAOK2Q9UL54 1235 aa16.22■□□□□ 0.19
ARHGEF1-222ENST00000600517 CDK5RAP2Q96SN8 1893 aa16.21■□□□□ 0.19
ARHGEF1-222ENST00000600517 NUCB1Q02818 461 aa16.21■□□□□ 0.19
ARHGEF1-222ENST00000600517 B4GALNT3Q6L9W6 998 aa16.21■□□□□ 0.19
ARHGEF1-222ENST00000600517 CHD1LQ86WJ1 897 aa16.21■□□□□ 0.19
ARHGEF1-222ENST00000600517 OSBP2Q969R2 916 aa16.21■□□□□ 0.19
ARHGEF1-222ENST00000600517 ERO1AQ96HE7 468 aa16.21■□□□□ 0.19
ARHGEF1-222ENST00000600517 LNPKQ9C0E8 428 aa16.21■□□□□ 0.19
ARHGEF1-222ENST00000600517 ZBTB21Q9ULJ3 1066 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms