RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 ORC4O43929 436 aa14.6□□□□□ -0.07
TGFB1-204ENST00000600196 HSPA4P34932 840 aa14.6□□□□□ -0.07
TGFB1-204ENST00000600196 PTH1RQ03431 593 aa14.6□□□□□ -0.07
TGFB1-204ENST00000600196 PPARAQ07869 468 aa14.6□□□□□ -0.07
TGFB1-204ENST00000600196 TCP10Q12799 353 aa14.6□□□□□ -0.07
TGFB1-204ENST00000600196 TATDN1Q6P1N9 297 aa14.6□□□□□ -0.07
TGFB1-204ENST00000600196 C16orf86Q6ZW13 317 aa14.6□□□□□ -0.07
TGFB1-204ENST00000600196 SH3BP5LQ7L8J4 393 aa14.6□□□□□ -0.07
TGFB1-204ENST00000600196 USP48Q86UV5 1035 aa14.6□□□□□ -0.07
TGFB1-204ENST00000600196 ZNF526Q8TF50 670 aaPredicted RBP14.6□□□□□ -0.07
TGFB1-204ENST00000600196 ZNF112Q9UJU3 913 aa14.6□□□□□ -0.07
TGFB1-204ENST00000600196 PALD1Q9ULE6 856 aa14.6□□□□□ -0.07
TGFB1-204ENST00000600196 RBM8AQ9Y5S9 174 aaKnown RBP14.6□□□□□ -0.07
TGFB1-204ENST00000600196 ASTN2O75129 1339 aaPredicted RBP14.6□□□□□ -0.07
TGFB1-204ENST00000600196 HMGB1P09429 215 aaKnown RBP14.59□□□□□ -0.07
TGFB1-204ENST00000600196 CACNB3P54284 484 aa14.59□□□□□ -0.07
TGFB1-204ENST00000600196 CCDC178Q5BJE1 867 aa14.59□□□□□ -0.07
TGFB1-204ENST00000600196 STAG1Q8WVM7 1258 aa14.59□□□□□ -0.07
TGFB1-204ENST00000600196 TRIM34Q9BYJ4 488 aa14.59□□□□□ -0.07
TGFB1-204ENST00000600196 ZNF341Q9BYN7 854 aa14.59□□□□□ -0.07
TGFB1-204ENST00000600196 TBC1D2Q9BYX2 928 aa14.59□□□□□ -0.07
TGFB1-204ENST00000600196 TMEM39BQ9GZU3 492 aa14.59□□□□□ -0.07
TGFB1-204ENST00000600196 CTNND1O60716 968 aaKnown RBP14.58□□□□□ -0.08
TGFB1-204ENST00000600196 PLCD1P51178 756 aa14.58□□□□□ -0.08
TGFB1-204ENST00000600196 AKNAD1Q5T1N1 836 aa14.58□□□□□ -0.08
TGFB1-204ENST00000600196 MAP1SQ66K74 1059 aaPredicted RBP14.58□□□□□ -0.08
TGFB1-204ENST00000600196 MFSD6Q6ZSS7 791 aa14.58□□□□□ -0.08
TGFB1-204ENST00000600196 ARMC9Q7Z3E5 817 aa14.58□□□□□ -0.08
TGFB1-204ENST00000600196 ZFPM1Q8IX07 1006 aa14.58□□□□□ -0.08
TGFB1-204ENST00000600196 CRACR2BQ8N4Y2 399 aaPredicted RBP14.58□□□□□ -0.08
TGFB1-204ENST00000600196 CDCA5Q96FF9 252 aa14.58□□□□□ -0.08
TGFB1-204ENST00000600196 KRT23Q9C075 422 aa14.58□□□□□ -0.08
TGFB1-204ENST00000600196 MINDY4BA8MYZ0 360 aa14.57□□□□□ -0.08
TGFB1-204ENST00000600196 IREB2P48200 963 aaKnown RBP14.57□□□□□ -0.08
TGFB1-204ENST00000600196 TRDNQ13061 729 aa14.57□□□□□ -0.08
TGFB1-204ENST00000600196 NBPF12Q5TAG4 269 aaPredicted RBP14.57□□□□□ -0.08
TGFB1-204ENST00000600196 GLIS2Q9BZE0 524 aaPredicted RBP14.57□□□□□ -0.08
TGFB1-204ENST00000600196 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.57□□□□□ -0.08
TGFB1-204ENST00000600196 PASKQ96RG2 1323 aa14.57□□□□□ -0.08
TGFB1-204ENST00000600196 CDK5RAP2Q96SN8 1893 aa14.57□□□□□ -0.08
TGFB1-204ENST00000600196 POLR2AP24928 1970 aaKnown RBP14.56□□□□□ -0.08
TGFB1-204ENST00000600196 CYP21A2P08686 494 aa14.56□□□□□ -0.08
TGFB1-204ENST00000600196 POTEIP0CG38 1075 aa14.56□□□□□ -0.08
TGFB1-204ENST00000600196 POTEJP0CG39 1038 aa14.56□□□□□ -0.08
TGFB1-204ENST00000600196 PSMA5P28066 241 aa14.56□□□□□ -0.08
TGFB1-204ENST00000600196 CDK8P49336 464 aa14.56□□□□□ -0.08
TGFB1-204ENST00000600196 RBM25P49756 843 aaKnown RBP14.56□□□□□ -0.08
TGFB1-204ENST00000600196 NOL9Q5SY16 702 aaKnown RBP14.56□□□□□ -0.08
TGFB1-204ENST00000600196 CREB3L3Q68CJ9 461 aa14.56□□□□□ -0.08
TGFB1-204ENST00000600196 ZNF444Q8N0Y2 327 aaPredicted RBP14.56□□□□□ -0.08
TGFB1-204ENST00000600196 C2orf69Q8N8R5 385 aa14.56□□□□□ -0.08
TGFB1-204ENST00000600196 KLRG1Q96E93 195 aa14.56□□□□□ -0.08
TGFB1-204ENST00000600196 HHIPL1Q96JK4 782 aa14.56□□□□□ -0.08
TGFB1-204ENST00000600196 TM6SF1Q9BZW5 370 aa14.56□□□□□ -0.08
TGFB1-204ENST00000600196 MKNK2Q9HBH9 465 aa14.56□□□□□ -0.08
TGFB1-204ENST00000600196 TCP11L1Q9NUJ3 509 aa14.56□□□□□ -0.08
TGFB1-204ENST00000600196 SAP30BPQ9UHR5 308 aaKnown RBP14.56□□□□□ -0.08
TGFB1-204ENST00000600196 SYNPO2Q9UMS6 1093 aa14.56□□□□□ -0.08
TGFB1-204ENST00000600196 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.56□□□□□ -0.08
TGFB1-204ENST00000600196 WDR19Q8NEZ3 1342 aa14.56□□□□□ -0.08
TGFB1-204ENST00000600196 MYH1P12882 1939 aa14.56□□□□□ -0.08
TGFB1-204ENST00000600196 DDX60LQ5H9U9 1706 aaKnown RBP14.55□□□□□ -0.08
TGFB1-204ENST00000600196 PHF20L1A8MW92 1017 aa14.55□□□□□ -0.08
TGFB1-204ENST00000600196 ADM5C9JUS6 153 aa14.55□□□□□ -0.08
TGFB1-204ENST00000600196 SLC27A2O14975 620 aa14.55□□□□□ -0.08
TGFB1-204ENST00000600196 NCOA7Q8NI08 942 aa14.55□□□□□ -0.08
TGFB1-204ENST00000600196 ESR2Q92731 530 aa14.55□□□□□ -0.08
TGFB1-204ENST00000600196 USP2O75604 605 aaPredicted RBP14.54□□□□□ -0.08
TGFB1-204ENST00000600196 ASNSP08243 561 aa14.54□□□□□ -0.08
TGFB1-204ENST00000600196 CAP2P40123 477 aa14.54□□□□□ -0.08
TGFB1-204ENST00000600196 MAP3K9P80192 1104 aa14.54□□□□□ -0.08
TGFB1-204ENST00000600196 CERKLQ49MI3 558 aaPredicted RBP14.54□□□□□ -0.08
TGFB1-204ENST00000600196 LDLRAD1Q5T700 205 aa14.54□□□□□ -0.08
TGFB1-204ENST00000600196 ANKRD13AQ8IZ07 590 aa14.54□□□□□ -0.08
TGFB1-204ENST00000600196 FBXL16Q8N461 479 aa14.54□□□□□ -0.08
TGFB1-204ENST00000600196 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.54□□□□□ -0.08
TGFB1-204ENST00000600196 TTC14Q96N46 770 aa14.54□□□□□ -0.08
TGFB1-204ENST00000600196 CABP5Q9NP86 173 aa14.54□□□□□ -0.08
TGFB1-204ENST00000600196 NAV1Q8NEY1 1877 aa14.54□□□□□ -0.08
TGFB1-204ENST00000600196 PLIN4Q96Q06 1357 aa14.53□□□□□ -0.08
TGFB1-204ENST00000600196 SHMT1P34896 483 aa14.53□□□□□ -0.08
TGFB1-204ENST00000600196 TMEM179Q6ZVK1 233 aa14.53□□□□□ -0.08
TGFB1-204ENST00000600196 TMTC2Q8N394 836 aa14.53□□□□□ -0.08
TGFB1-204ENST00000600196 NEDD1Q8NHV4 660 aa14.53□□□□□ -0.08
TGFB1-204ENST00000600196 GBA2Q9HCG7 927 aaPredicted RBP14.53□□□□□ -0.08
TGFB1-204ENST00000600196 E7EWF7 191 aa14.52□□□□□ -0.09
TGFB1-204ENST00000600196 CYP2D6P10635 497 aa14.52□□□□□ -0.09
TGFB1-204ENST00000600196 RASA1P20936 1047 aa14.52□□□□□ -0.09
TGFB1-204ENST00000600196 NOVP48745 357 aa14.52□□□□□ -0.09
TGFB1-204ENST00000600196 RALYLQ86SE5 291 aaKnown RBP14.52□□□□□ -0.09
TGFB1-204ENST00000600196 IQCA1Q86XH1 822 aa14.52□□□□□ -0.09
TGFB1-204ENST00000600196 SCYL3Q8IZE3 742 aa14.52□□□□□ -0.09
TGFB1-204ENST00000600196 ANKS1AQ92625 1134 aa14.52□□□□□ -0.09
TGFB1-204ENST00000600196 C22orf23Q9BZE7 217 aa14.52□□□□□ -0.09
TGFB1-204ENST00000600196 DNAJC18Q9H819 358 aa14.52□□□□□ -0.09
TGFB1-204ENST00000600196 KANSL2Q9H9L4 492 aa14.52□□□□□ -0.09
TGFB1-204ENST00000600196 CSADQ9Y600 493 aa14.52□□□□□ -0.09
TGFB1-204ENST00000600196 BAZ2AQ9UIF9 1905 aaKnown RBP14.51□□□□□ -0.09
TGFB1-204ENST00000600196 CELF2O95319 508 aaKnown RBP14.51□□□□□ -0.09
TGFB1-204ENST00000600196 SEC24BO95487 1268 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms