RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 MTX1Q13505 466 aa16.86■□□□□ 0.29
IRF3-225ENST00000600022 SHROOM1Q2M3G4 852 aaPredicted RBP16.86■□□□□ 0.29
IRF3-225ENST00000600022 ATF7IPQ6VMQ6 1270 aa16.86■□□□□ 0.29
IRF3-225ENST00000600022 SPATA5Q8NB90 893 aa16.86■□□□□ 0.29
IRF3-225ENST00000600022 SLAIN1Q8ND83 568 aa16.86■□□□□ 0.29
IRF3-225ENST00000600022 FRAT1Q92837 279 aaPredicted RBP16.86■□□□□ 0.29
IRF3-225ENST00000600022 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.86■□□□□ 0.29
IRF3-225ENST00000600022 SNRKQ9NRH2 765 aa16.86■□□□□ 0.29
IRF3-225ENST00000600022 TAOK2Q9UL54 1235 aa16.86■□□□□ 0.29
IRF3-225ENST00000600022 PDS5AQ29RF7 1337 aaKnown RBP16.86■□□□□ 0.29
IRF3-225ENST00000600022 MGAMO43451 1857 aa16.86■□□□□ 0.29
IRF3-225ENST00000600022 TNPO2O14787 897 aaKnown RBP16.85■□□□□ 0.29
IRF3-225ENST00000600022 TBC1D12O60347 775 aa16.85■□□□□ 0.29
IRF3-225ENST00000600022 MCAMP43121 646 aa16.85■□□□□ 0.29
IRF3-225ENST00000600022 UBXN2AP68543 259 aa16.85■□□□□ 0.29
IRF3-225ENST00000600022 MVPQ14764 893 aaKnown RBP16.85■□□□□ 0.29
IRF3-225ENST00000600022 C20orf194Q5TEA3 1177 aa16.85■□□□□ 0.29
IRF3-225ENST00000600022 SLF2Q8IX21 1173 aa16.85■□□□□ 0.29
IRF3-225ENST00000600022 SH3RF3Q8TEJ3 882 aaPredicted RBP16.85■□□□□ 0.29
IRF3-225ENST00000600022 SMCR8Q8TEV9 937 aaPredicted RBP16.85■□□□□ 0.29
IRF3-225ENST00000600022 CLUAP1Q96AJ1 413 aa16.85■□□□□ 0.29
IRF3-225ENST00000600022 DEFB118Q96PH6 123 aa16.85■□□□□ 0.29
IRF3-225ENST00000600022 AGTPBP1Q9UPW5 1226 aa16.85■□□□□ 0.29
IRF3-225ENST00000600022 AKAP2Q9Y2D5 859 aa16.85■□□□□ 0.29
IRF3-225ENST00000600022 SLC45A1Q9Y2W3 748 aa16.85■□□□□ 0.29
IRF3-225ENST00000600022 PTPRFP10586 1907 aa16.84■□□□□ 0.29
IRF3-225ENST00000600022 DOCK3Q8IZD9 2030 aa16.84■□□□□ 0.29
IRF3-225ENST00000600022 GNAI3P08754 354 aa16.84■□□□□ 0.29
IRF3-225ENST00000600022 TRIM32Q13049 653 aa16.84■□□□□ 0.29
IRF3-225ENST00000600022 NKX2-3Q8TAU0 364 aa16.84■□□□□ 0.29
IRF3-225ENST00000600022 PRO3102Q9H379 93 aa16.84■□□□□ 0.29
IRF3-225ENST00000600022 RAI14Q9P0K7 980 aa16.84■□□□□ 0.29
IRF3-225ENST00000600022 HDAC5Q9UQL6 1122 aa16.84■□□□□ 0.29
IRF3-225ENST00000600022 FARP2O94887 1054 aaPredicted RBP16.83■□□□□ 0.28
IRF3-225ENST00000600022 ARID4AP29374 1257 aaPredicted RBP16.83■□□□□ 0.28
IRF3-225ENST00000600022 HMGCS2P54868 508 aa16.83■□□□□ 0.28
IRF3-225ENST00000600022 GORABQ5T7V8 394 aa16.83■□□□□ 0.28
IRF3-225ENST00000600022 ADGRA1Q86SQ6 560 aa16.83■□□□□ 0.28
IRF3-225ENST00000600022 OSBPL5Q9H0X9 879 aaPredicted RBP16.83■□□□□ 0.28
IRF3-225ENST00000600022 DOCK1Q14185 1865 aa16.82■□□□□ 0.28
IRF3-225ENST00000600022 NPM3O75607 178 aaKnown RBP16.82■□□□□ 0.28
IRF3-225ENST00000600022 TFRCP02786 760 aaKnown RBP16.82■□□□□ 0.28
IRF3-225ENST00000600022 CAP2P40123 477 aa16.82■□□□□ 0.28
IRF3-225ENST00000600022 IRF5Q13568 498 aa16.82■□□□□ 0.28
IRF3-225ENST00000600022 TEX11Q8IYF3 940 aa16.82■□□□□ 0.28
IRF3-225ENST00000600022 ZNF280CQ8ND82 737 aa16.82■□□□□ 0.28
IRF3-225ENST00000600022 DIS3LQ8TF46 1054 aaKnown RBP16.82■□□□□ 0.28
IRF3-225ENST00000600022 GJD2Q9UKL4 321 aa16.82■□□□□ 0.28
IRF3-225ENST00000600022 ZBTB7BO15156 539 aaPredicted RBP16.81■□□□□ 0.28
IRF3-225ENST00000600022 GNAI2P04899 355 aa16.81■□□□□ 0.28
IRF3-225ENST00000600022 RLBP1P12271 317 aa16.81■□□□□ 0.28
IRF3-225ENST00000600022 FTSJ3Q8IY81 847 aaKnown RBP16.81■□□□□ 0.28
IRF3-225ENST00000600022 PXYLP1Q8TE99 480 aa16.81■□□□□ 0.28
IRF3-225ENST00000600022 PAWRQ96IZ0 340 aaKnown RBP16.81■□□□□ 0.28
IRF3-225ENST00000600022 ASCC2Q9H1I8 757 aaPredicted RBP16.81■□□□□ 0.28
IRF3-225ENST00000600022 PAK6Q9NQU5 681 aaPredicted RBP16.81■□□□□ 0.28
IRF3-225ENST00000600022 AATFQ9NY61 560 aaKnown RBP eCLIP16.81■□□□□ 0.28
IRF3-225ENST00000600022 LRP2BPQ9P2M1 347 aa16.81■□□□□ 0.28
IRF3-225ENST00000600022 COL6A3P12111 3177 aa16.81■□□□□ 0.28
IRF3-225ENST00000600022 A0A0C4DFX4 3053 aa16.81■□□□□ 0.28
IRF3-225ENST00000600022 LDHCP07864 332 aa16.8■□□□□ 0.28
IRF3-225ENST00000600022 GSTO1P78417 241 aa16.8■□□□□ 0.28
IRF3-225ENST00000600022 G3BP1Q13283 466 aaKnown RBP eCLIP16.8■□□□□ 0.28
IRF3-225ENST00000600022 POTEEQ6S8J3 1075 aa16.8■□□□□ 0.28
IRF3-225ENST00000600022 PANK1Q8TE04 598 aa16.8■□□□□ 0.28
IRF3-225ENST00000600022 CRBNQ96SW2 442 aa16.8■□□□□ 0.28
IRF3-225ENST00000600022 DBNDD2Q9BQY9 259 aa16.8■□□□□ 0.28
IRF3-225ENST00000600022 HTATIP2Q9BUP3 242 aa16.8■□□□□ 0.28
IRF3-225ENST00000600022 CRISPLD2Q9H0B8 497 aa16.8■□□□□ 0.28
IRF3-225ENST00000600022 DNAJC18Q9H819 358 aa16.8■□□□□ 0.28
IRF3-225ENST00000600022 CYP2E1P05181 493 aaPredicted RBP16.79■□□□□ 0.28
IRF3-225ENST00000600022 FAM110CQ1W6H9 321 aa16.79■□□□□ 0.28
IRF3-225ENST00000600022 MAPKAPK5Q8IW41 473 aa16.79■□□□□ 0.28
IRF3-225ENST00000600022 TMEM57Q8N5G2 664 aa16.79■□□□□ 0.28
IRF3-225ENST00000600022 PROCA1Q8NCQ7 364 aaPredicted RBP16.79■□□□□ 0.28
IRF3-225ENST00000600022 TGFBRAP1Q8WUH2 860 aa16.79■□□□□ 0.28
IRF3-225ENST00000600022 COA7Q96BR5 231 aa16.79■□□□□ 0.28
IRF3-225ENST00000600022 CCDC136Q96JN2 1154 aa16.79■□□□□ 0.28
IRF3-225ENST00000600022 P2RX7Q99572 595 aaKnown RBP16.79■□□□□ 0.28
IRF3-225ENST00000600022 STAP2Q9UGK3 403 aa16.79■□□□□ 0.28
IRF3-225ENST00000600022 USP17L5A8MUK1 530 aa16.78■□□□□ 0.28
IRF3-225ENST00000600022 SOX1O00570 391 aaPredicted RBP16.78■□□□□ 0.28
IRF3-225ENST00000600022 MNX1P50219 401 aaPredicted RBP16.78■□□□□ 0.28
IRF3-225ENST00000600022 DYNLL1P63167 89 aaKnown RBP16.78■□□□□ 0.28
IRF3-225ENST00000600022 EXOC6Q8TAG9 804 aa16.78■□□□□ 0.28
IRF3-225ENST00000600022 C1orf115Q9H7X2 142 aa16.78■□□□□ 0.28
IRF3-225ENST00000600022 TXNRD2Q9NNW7 524 aa16.78■□□□□ 0.28
IRF3-225ENST00000600022 PIH1D3Q9NQM4 214 aaKnown RBP16.78■□□□□ 0.28
IRF3-225ENST00000600022 PALD1Q9ULE6 856 aa16.78■□□□□ 0.28
IRF3-225ENST00000600022 EVI5O60447 810 aa16.77■□□□□ 0.28
IRF3-225ENST00000600022 GDF11O95390 407 aa16.77■□□□□ 0.28
IRF3-225ENST00000600022 MTMR2Q13614 643 aa16.77■□□□□ 0.28
IRF3-225ENST00000600022 POLA2Q14181 598 aa16.77■□□□□ 0.28
IRF3-225ENST00000600022 TNNI3KQ59H18 835 aa16.77■□□□□ 0.28
IRF3-225ENST00000600022 SH3D19Q5HYK7 790 aa16.77■□□□□ 0.28
IRF3-225ENST00000600022 NAA16Q6N069 864 aaPredicted RBP16.77■□□□□ 0.28
IRF3-225ENST00000600022 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.77■□□□□ 0.282e-7■■■□□ 14.6
IRF3-225ENST00000600022 TLR7Q9NYK1 1049 aaKnown RBP16.77■□□□□ 0.28
IRF3-225ENST00000600022 PI4KBQ9UBF8 816 aa16.77■□□□□ 0.28
IRF3-225ENST00000600022 SAP30BPQ9UHR5 308 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms