RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 PPP4CP60510 307 aa19.28■□□□□ 0.68
SMG9-208ENST00000598886 MTFR1Q15390 333 aa19.28■□□□□ 0.68
SMG9-208ENST00000598886 METTL16Q86W50 562 aaKnown RBP19.28■□□□□ 0.68
SMG9-208ENST00000598886 TMEM106CQ9BVX2 250 aa19.28■□□□□ 0.68
SMG9-208ENST00000598886 DNAJC18Q9H819 358 aa19.28■□□□□ 0.68
SMG9-208ENST00000598886 AGTPBP1Q9UPW5 1226 aa19.28■□□□□ 0.68
SMG9-208ENST00000598886 MYPNQ86TC9 1320 aa19.27■□□□□ 0.68
SMG9-208ENST00000598886 TRIM75PA6NK02 468 aa19.27■□□□□ 0.68
SMG9-208ENST00000598886 PRKCZQ05513 592 aa19.27■□□□□ 0.68
SMG9-208ENST00000598886 TREML2Q5T2D2 321 aa19.27■□□□□ 0.68
SMG9-208ENST00000598886 TEX11Q8IYF3 940 aa19.27■□□□□ 0.68
SMG9-208ENST00000598886 PIH1D3Q9NQM4 214 aaKnown RBP19.27■□□□□ 0.68
SMG9-208ENST00000598886 GABRQQ9UN88 632 aa19.27■□□□□ 0.68
SMG9-208ENST00000598886 ZBED9Q6R2W3 1325 aa19.26■□□□□ 0.67
SMG9-208ENST00000598886 SURF6O75683 361 aaKnown RBP19.26■□□□□ 0.67
SMG9-208ENST00000598886 CAP2P40123 477 aa19.26■□□□□ 0.67
SMG9-208ENST00000598886 JAG1P78504 1218 aa19.26■□□□□ 0.67
SMG9-208ENST00000598886 CEP85Q6P2H3 762 aa19.26■□□□□ 0.67
SMG9-208ENST00000598886 GADL1Q6ZQY3 521 aa19.26■□□□□ 0.67
SMG9-208ENST00000598886 UBE2Q1Q7Z7E8 422 aa19.26■□□□□ 0.67
SMG9-208ENST00000598886 EAF2Q96CJ1 260 aaPredicted RBP19.26■□□□□ 0.67
SMG9-208ENST00000598886 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.26■□□□□ 0.67
SMG9-208ENST00000598886 LRP2BPQ9P2M1 347 aa19.26■□□□□ 0.67
SMG9-208ENST00000598886 FLT1P17948 1338 aa19.25■□□□□ 0.67
SMG9-208ENST00000598886 NAV1Q8NEY1 1877 aa19.25■□□□□ 0.67
SMG9-208ENST00000598886 FMNL1O95466 1100 aaPredicted RBP19.25■□□□□ 0.67
SMG9-208ENST00000598886 MYCP01106 439 aaPredicted RBP19.25■□□□□ 0.67
SMG9-208ENST00000598886 GRK4P32298 578 aa19.25■□□□□ 0.67
SMG9-208ENST00000598886 ZAP70P43403 619 aa19.25■□□□□ 0.67
SMG9-208ENST00000598886 TTC39AQ5SRH9 613 aa19.25■□□□□ 0.67
SMG9-208ENST00000598886 NAA16Q6N069 864 aaPredicted RBP19.25■□□□□ 0.67
SMG9-208ENST00000598886 ITPRIPQ8IWB1 547 aa19.25■□□□□ 0.67
SMG9-208ENST00000598886 PROCA1Q8NCQ7 364 aaPredicted RBP19.25■□□□□ 0.67
SMG9-208ENST00000598886 AATFQ9NY61 560 aaKnown RBP eCLIP19.25■□□□□ 0.67
SMG9-208ENST00000598886 HERC5Q9UII4 1024 aaKnown RBP19.25■□□□□ 0.67
SMG9-208ENST00000598886 ALPK3Q96L96 1907 aa19.24■□□□□ 0.67
SMG9-208ENST00000598886 IGSF3O75054 1194 aa19.24■□□□□ 0.67
SMG9-208ENST00000598886 FCGRTP55899 365 aa19.24■□□□□ 0.67
SMG9-208ENST00000598886 SLC4A8Q2Y0W8 1093 aa19.24■□□□□ 0.67
SMG9-208ENST00000598886 SH3D19Q5HYK7 790 aa19.24■□□□□ 0.67
SMG9-208ENST00000598886 HOXD10P28358 340 aa19.23■□□□□ 0.67
SMG9-208ENST00000598886 SPP2Q13103 211 aa19.23■□□□□ 0.67
SMG9-208ENST00000598886 SHROOM1Q2M3G4 852 aaPredicted RBP19.23■□□□□ 0.67
SMG9-208ENST00000598886 CCDC158Q5M9N0 1113 aa19.23■□□□□ 0.67
SMG9-208ENST00000598886 FTSJ3Q8IY81 847 aaKnown RBP19.23■□□□□ 0.67
SMG9-208ENST00000598886 ZNF280CQ8ND82 737 aa19.23■□□□□ 0.67
SMG9-208ENST00000598886 RAET1EQ8TD07 263 aa19.22■□□□□ 0.67
SMG9-208ENST00000598886 PANK1Q8TE04 598 aa19.22■□□□□ 0.67
SMG9-208ENST00000598886 TBC1D2Q9BYX2 928 aa19.22■□□□□ 0.67
SMG9-208ENST00000598886 CCDC8Q9H0W5 538 aaPredicted RBP19.22■□□□□ 0.67
SMG9-208ENST00000598886 DHX36Q9H2U1 1008 aaKnown RBP19.22■□□□□ 0.67
SMG9-208ENST00000598886 PI4KBQ9UBF8 816 aa19.22■□□□□ 0.67
SMG9-208ENST00000598886 RANBP2P49792 3224 aaKnown RBP19.21■□□□□ 0.67
SMG9-208ENST00000598886 CCL5P13501 91 aa19.21■□□□□ 0.67
SMG9-208ENST00000598886 GJA8P48165 433 aa19.21■□□□□ 0.67
SMG9-208ENST00000598886 HMGCS2P54868 508 aa19.21■□□□□ 0.67
SMG9-208ENST00000598886 OS9Q13438 667 aaPredicted RBP19.21■□□□□ 0.67
SMG9-208ENST00000598886 IRF5Q13568 498 aa19.21■□□□□ 0.67
SMG9-208ENST00000598886 FAM110CQ1W6H9 321 aa19.21■□□□□ 0.67
SMG9-208ENST00000598886 MAPKAPK5Q8IW41 473 aa19.21■□□□□ 0.67
SMG9-208ENST00000598886 SLAIN1Q8ND83 568 aa19.21■□□□□ 0.67
SMG9-208ENST00000598886 TGFBRAP1Q8WUH2 860 aa19.21■□□□□ 0.67
SMG9-208ENST00000598886 WDR18Q9BV38 432 aa19.21■□□□□ 0.67
SMG9-208ENST00000598886 USP17L5A8MUK1 530 aa19.2■□□□□ 0.66
SMG9-208ENST00000598886 BAG3O95817 575 aa19.2■□□□□ 0.66
SMG9-208ENST00000598886 GJB1P08034 283 aa19.2■□□□□ 0.66
SMG9-208ENST00000598886 PLCG2P16885 1265 aa19.2■□□□□ 0.66
SMG9-208ENST00000598886 FLT3LGP49771 235 aa19.2■□□□□ 0.66
SMG9-208ENST00000598886 DYNLL1P63167 89 aaKnown RBP19.2■□□□□ 0.66
SMG9-208ENST00000598886 HABP4Q5JVS0 413 aaKnown RBP19.2■□□□□ 0.66
SMG9-208ENST00000598886 DIEXFQ68CQ4 756 aaKnown RBP19.2■□□□□ 0.66
SMG9-208ENST00000598886 ANKRD13CQ8N6S4 541 aa19.2■□□□□ 0.66
SMG9-208ENST00000598886 GCC1Q96CN9 775 aa19.2■□□□□ 0.66
SMG9-208ENST00000598886 NDUFB9Q9Y6M9 179 aa19.2■□□□□ 0.66
SMG9-208ENST00000598886 SMCR8Q8TEV9 937 aaPredicted RBP19.19■□□□□ 0.66
SMG9-208ENST00000598886 UNC93B1Q9H1C4 597 aa19.19■□□□□ 0.66
SMG9-208ENST00000598886 ANTXR1Q9H6X2 564 aa19.19■□□□□ 0.66
SMG9-208ENST00000598886 PALD1Q9ULE6 856 aa19.19■□□□□ 0.66
SMG9-208ENST00000598886 EXOC6BQ9Y2D4 811 aa19.19■□□□□ 0.66
SMG9-208ENST00000598886 ADCY3O60266 1144 aa19.18■□□□□ 0.66
SMG9-208ENST00000598886 ELNP15502 786 aa19.18■□□□□ 0.66
SMG9-208ENST00000598886 PXYLP1Q8TE99 480 aa19.18■□□□□ 0.66
SMG9-208ENST00000598886 NOL10Q9BSC4 688 aaKnown RBP19.18■□□□□ 0.66
SMG9-208ENST00000598886 ASCC2Q9H1I8 757 aaPredicted RBP19.18■□□□□ 0.66
SMG9-208ENST00000598886 PNMA3Q9UL41 463 aa19.18■□□□□ 0.66
SMG9-208ENST00000598886 MYH7P12883 1935 aa19.17■□□□□ 0.66
SMG9-208ENST00000598886 TNPO2O14787 897 aaKnown RBP19.17■□□□□ 0.66
SMG9-208ENST00000598886 POTEEQ6S8J3 1075 aa19.17■□□□□ 0.66
SMG9-208ENST00000598886 FOXP4Q8IVH2 680 aaPredicted RBP19.17■□□□□ 0.66
SMG9-208ENST00000598886 PCDH10Q9P2E7 1040 aa19.17■□□□□ 0.66
SMG9-208ENST00000598886 MORF4L1Q9UBU8 362 aa19.17■□□□□ 0.66
SMG9-208ENST00000598886 INHAP05111 366 aa19.16■□□□□ 0.66
SMG9-208ENST00000598886 ASNSP08243 561 aa19.16■□□□□ 0.66
SMG9-208ENST00000598886 CYP7A1P22680 504 aa19.16■□□□□ 0.66
SMG9-208ENST00000598886 GCLCP48506 637 aaPredicted RBP19.16■□□□□ 0.66
SMG9-208ENST00000598886 BACE1P56817 501 aa19.16■□□□□ 0.66
SMG9-208ENST00000598886 MTMR2Q13614 643 aa19.16■□□□□ 0.66
SMG9-208ENST00000598886 SIRT2Q8IXJ6 389 aa19.16■□□□□ 0.66
SMG9-208ENST00000598886 RNF208Q9H0X6 261 aa19.16■□□□□ 0.66
SMG9-208ENST00000598886 PAK6Q9NQU5 681 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms