RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 ZNF280CQ8ND82 737 aa20.93■□□□□ 0.94
PNKP-210ENST00000597965 U2AF1L4Q8WU68 220 aaKnown RBP20.93■□□□□ 0.94
PNKP-210ENST00000597965 AS3MTQ9HBK9 375 aa20.93■□□□□ 0.94
PNKP-210ENST00000597965 LRP2BPQ9P2M1 347 aa20.93■□□□□ 0.94
PNKP-210ENST00000597965 PHIPQ8WWQ0 1821 aa20.92■□□□□ 0.94
PNKP-210ENST00000597965 BAG3O95817 575 aa20.92■□□□□ 0.94
PNKP-210ENST00000597965 DHX36Q9H2U1 1008 aaKnown RBP20.92■□□□□ 0.94
PNKP-210ENST00000597965 GABRQQ9UN88 632 aa20.92■□□□□ 0.94
PNKP-210ENST00000597965 SGPL1O95470 568 aa20.91■□□□□ 0.94
PNKP-210ENST00000597965 UBE2Q1Q7Z7E8 422 aa20.91■□□□□ 0.94
PNKP-210ENST00000597965 PI4KBQ9UBF8 816 aa20.91■□□□□ 0.94
PNKP-210ENST00000597965 FARP2O94887 1054 aaPredicted RBP20.9■□□□□ 0.94
PNKP-210ENST00000597965 TRIM27P14373 513 aa20.9■□□□□ 0.94
PNKP-210ENST00000597965 CAP2P40123 477 aa20.9■□□□□ 0.94
PNKP-210ENST00000597965 CCDC158Q5M9N0 1113 aa20.9■□□□□ 0.94
PNKP-210ENST00000597965 TEX11Q8IYF3 940 aa20.9■□□□□ 0.94
PNKP-210ENST00000597965 ANKRD13CQ8N6S4 541 aa20.9■□□□□ 0.94
PNKP-210ENST00000597965 FRAT1Q92837 279 aaPredicted RBP20.9■□□□□ 0.94
PNKP-210ENST00000597965 USP17L5A8MUK1 530 aa20.89■□□□□ 0.93
PNKP-210ENST00000597965 INHAP05111 366 aa20.89■□□□□ 0.93
PNKP-210ENST00000597965 SPP2Q13103 211 aa20.89■□□□□ 0.93
PNKP-210ENST00000597965 UNC93B1Q9H1C4 597 aa20.89■□□□□ 0.93
PNKP-210ENST00000597965 GPR108Q9NPR9 543 aa20.89■□□□□ 0.93
PNKP-210ENST00000597965 TFRCP02786 760 aaKnown RBP20.88■□□□□ 0.93
PNKP-210ENST00000597965 CHRDL2Q6WN34 429 aa20.88■□□□□ 0.93
PNKP-210ENST00000597965 TBC1D9Q6ZT07 1266 aa20.88■□□□□ 0.93
PNKP-210ENST00000597965 ZNF384Q8TF68 577 aa20.88■□□□□ 0.93
PNKP-210ENST00000597965 TRIM34Q9BYJ4 488 aa20.88■□□□□ 0.93
PNKP-210ENST00000597965 GINM1Q9NU53 330 aa20.88■□□□□ 0.93
PNKP-210ENST00000597965 ASNSP08243 561 aa20.87■□□□□ 0.93
PNKP-210ENST00000597965 ELNP15502 786 aa20.87■□□□□ 0.93
PNKP-210ENST00000597965 MCAMP43121 646 aa20.87■□□□□ 0.93
PNKP-210ENST00000597965 TTC39AQ5SRH9 613 aa20.87■□□□□ 0.93
PNKP-210ENST00000597965 TREML2Q5T2D2 321 aa20.87■□□□□ 0.93
PNKP-210ENST00000597965 NAA16Q6N069 864 aaPredicted RBP20.87■□□□□ 0.93
PNKP-210ENST00000597965 TAOK2Q9UL54 1235 aa20.87■□□□□ 0.93
PNKP-210ENST00000597965 ATAD5Q96QE3 1844 aa20.86■□□□□ 0.93
PNKP-210ENST00000597965 PNMA6EA0A0J9YXQ4 647 aa20.86■□□□□ 0.93
PNKP-210ENST00000597965 HMGCS2P54868 508 aa20.86■□□□□ 0.93
PNKP-210ENST00000597965 OS9Q13438 667 aaPredicted RBP20.86■□□□□ 0.93
PNKP-210ENST00000597965 SH3D19Q5HYK7 790 aa20.86■□□□□ 0.93
PNKP-210ENST00000597965 PI16Q6UXB8 463 aa20.86■□□□□ 0.93
PNKP-210ENST00000597965 PAK6Q9NQU5 681 aaPredicted RBP20.86■□□□□ 0.93
PNKP-210ENST00000597965 LOC285556D6RIA3 1793 aa20.86■□□□□ 0.93
PNKP-210ENST00000597965 TRIOBPQ9H2D6 2365 aa20.85■□□□□ 0.93
PNKP-210ENST00000597965 FAM196BA6NMK8 535 aa20.85■□□□□ 0.93
PNKP-210ENST00000597965 EVI5O60447 810 aa20.85■□□□□ 0.93
PNKP-210ENST00000597965 CERS3Q8IU89 383 aa20.85■□□□□ 0.93
PNKP-210ENST00000597965 FOXP4Q8IVH2 680 aaPredicted RBP20.85■□□□□ 0.93
PNKP-210ENST00000597965 DEFB118Q96PH6 123 aa20.85■□□□□ 0.93
PNKP-210ENST00000597965 WDR18Q9BV38 432 aa20.85■□□□□ 0.93
PNKP-210ENST00000597965 TMOD4Q9NZQ9 345 aa20.85■□□□□ 0.93
PNKP-210ENST00000597965 HMGCRP04035 888 aa20.84■□□□□ 0.93
PNKP-210ENST00000597965 SLURP2P0DP57 97 aa20.84■□□□□ 0.93
PNKP-210ENST00000597965 PPP4CP60510 307 aa20.84■□□□□ 0.93
PNKP-210ENST00000597965 IRX3P78415 501 aaPredicted RBP20.84■□□□□ 0.93
PNKP-210ENST00000597965 ZKSCAN2Q63HK3 967 aa20.84■□□□□ 0.93
PNKP-210ENST00000597965 CCDC84Q86UT8 332 aaPredicted RBP20.84■□□□□ 0.93
PNKP-210ENST00000597965 CRACR2BQ8N4Y2 399 aaPredicted RBP20.84■□□□□ 0.93
PNKP-210ENST00000597965 ANKLE1Q8NAG6 615 aa20.84■□□□□ 0.93
PNKP-210ENST00000597965 SH3RF3Q8TEJ3 882 aaPredicted RBP20.84■□□□□ 0.93
PNKP-210ENST00000597965 ZNF512BQ96KM6 892 aaPredicted RBP20.84■□□□□ 0.93
PNKP-210ENST00000597965 ASCC2Q9H1I8 757 aaPredicted RBP20.84■□□□□ 0.93
PNKP-210ENST00000597965 AATFQ9NY61 560 aaKnown RBP eCLIP20.84■□□□□ 0.93
PNKP-210ENST00000597965 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.84■□□□□ 0.93
PNKP-210ENST00000597965 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.84■□□□□ 0.93
PNKP-210ENST00000597965 MAST2Q6P0Q8 1798 aa20.83■□□□□ 0.93
PNKP-210ENST00000597965 A0A1W2PPC1 479 aa20.83■□□□□ 0.93
PNKP-210ENST00000597965 C19orf81C9J6K1 198 aa20.83■□□□□ 0.93
PNKP-210ENST00000597965 BACE1P56817 501 aa20.83■□□□□ 0.93
PNKP-210ENST00000597965 TNNI3KQ59H18 835 aa20.83■□□□□ 0.93
PNKP-210ENST00000597965 CLUAP1Q96AJ1 413 aa20.83■□□□□ 0.93
PNKP-210ENST00000597965 RBM27Q9P2N5 1060 aaKnown RBP20.83■□□□□ 0.93
PNKP-210ENST00000597965 FPGT-TNNI3KV9GXZ4 949 aa20.83■□□□□ 0.93
PNKP-210ENST00000597965 BCAR3O75815 825 aa20.82■□□□□ 0.92
PNKP-210ENST00000597965 HLA-DOAP06340 250 aa20.82■□□□□ 0.92
PNKP-210ENST00000597965 NECAB2Q7Z6G3 386 aa20.82■□□□□ 0.92
PNKP-210ENST00000597965 GTF3C2Q8WUA4 911 aaPredicted RBP20.82■□□□□ 0.92
PNKP-210ENST00000597965 CRISPLD2Q9H0B8 497 aa20.82■□□□□ 0.92
PNKP-210ENST00000597965 DOCK3Q8IZD9 2030 aa20.82■□□□□ 0.92
PNKP-210ENST00000597965 ZBTB7BO15156 539 aaPredicted RBP20.81■□□□□ 0.92
PNKP-210ENST00000597965 HOXA7P31268 230 aaPredicted RBP20.81■□□□□ 0.92
PNKP-210ENST00000597965 POLA2Q14181 598 aa20.81■□□□□ 0.92
PNKP-210ENST00000597965 TMED8Q6PL24 325 aaPredicted RBP20.81■□□□□ 0.92
PNKP-210ENST00000597965 METTL16Q86W50 562 aaKnown RBP20.81■□□□□ 0.92
PNKP-210ENST00000597965 SSH3Q8TE77 659 aa20.81■□□□□ 0.92
PNKP-210ENST00000597965 TGFBRAP1Q8WUH2 860 aa20.81■□□□□ 0.92
PNKP-210ENST00000597965 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.81■□□□□ 0.92
PNKP-210ENST00000597965 HMX1Q9NP08 348 aaPredicted RBP20.81■□□□□ 0.92
PNKP-210ENST00000597965 MORF4L1Q9UBU8 362 aa20.81■□□□□ 0.92
PNKP-210ENST00000597965 FLT1P17948 1338 aa20.8■□□□□ 0.92
PNKP-210ENST00000597965 RPTORQ8N122 1335 aa20.8■□□□□ 0.92
PNKP-210ENST00000597965 USP17L10C9JJH3 530 aa20.8■□□□□ 0.92
PNKP-210ENST00000597965 SURF6O75683 361 aaKnown RBP20.8■□□□□ 0.92
PNKP-210ENST00000597965 ATP8B2P98198 1209 aa20.8■□□□□ 0.92
PNKP-210ENST00000597965 MTMR2Q13614 643 aa20.8■□□□□ 0.92
PNKP-210ENST00000597965 FTSJ3Q8IY81 847 aaKnown RBP20.8■□□□□ 0.92
PNKP-210ENST00000597965 TRMT44Q8IYL2 757 aaKnown RBP20.8■□□□□ 0.92
PNKP-210ENST00000597965 TMEM57Q8N5G2 664 aa20.8■□□□□ 0.92
PNKP-210ENST00000597965 SOCS4Q8WXH5 440 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms