RNA–Protein interactions for RNA: ENST00000596788.1

IRF3-214, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-214ENST00000596788 VEGFAP15692 232 aaPredicted RBP24.75■■□□□ 1.55
IRF3-214ENST00000596788 AKNAD1Q5T1N1 836 aa24.75■■□□□ 1.55
IRF3-214ENST00000596788 JAKMIP1Q96N16 626 aaKnown RBP24.75■■□□□ 1.55
IRF3-214ENST00000596788 INCENPQ9NQS7 918 aa24.75■■□□□ 1.55
IRF3-214ENST00000596788 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.75■■□□□ 1.55
IRF3-214ENST00000596788 GABPAQ06546 454 aa24.74■■□□□ 1.55
IRF3-214ENST00000596788 COL9A3Q14050 684 aaPredicted RBP24.74■■□□□ 1.55
IRF3-214ENST00000596788 KRT32Q14532 448 aa24.74■■□□□ 1.55
IRF3-214ENST00000596788 PNMA8AQ86V59 439 aaPredicted RBP24.74■■□□□ 1.55
IRF3-214ENST00000596788 SLC44A5Q8NCS7 719 aa24.74■■□□□ 1.55
IRF3-214ENST00000596788 ZC3H15Q8WU90 426 aaKnown RBP24.74■■□□□ 1.55
IRF3-214ENST00000596788 TEPSINQ96N21 525 aa24.74■■□□□ 1.55
IRF3-214ENST00000596788 CSRNP1Q96S65 589 aa24.74■■□□□ 1.55
IRF3-214ENST00000596788 DEFB129Q9H1M3 183 aa24.74■■□□□ 1.55
IRF3-214ENST00000596788 EHD4Q9H223 541 aa24.74■■□□□ 1.55
IRF3-214ENST00000596788 SLC3A2P08195 630 aaKnown RBP24.73■■□□□ 1.55
IRF3-214ENST00000596788 POTEIP0CG38 1075 aa24.73■■□□□ 1.55
IRF3-214ENST00000596788 POTEJP0CG39 1038 aa24.73■■□□□ 1.55
IRF3-214ENST00000596788 SLURP2P0DP57 97 aa24.73■■□□□ 1.55
IRF3-214ENST00000596788 C16orf86Q6ZW13 317 aa24.73■■□□□ 1.55
IRF3-214ENST00000596788 NKX2-3Q8TAU0 364 aa24.73■■□□□ 1.55
IRF3-214ENST00000596788 FGRP09769 529 aa24.72■■□□□ 1.55
IRF3-214ENST00000596788 MFSD6Q6ZSS7 791 aa24.72■■□□□ 1.55
IRF3-214ENST00000596788 DCPSQ96C86 337 aaKnown RBP24.72■■□□□ 1.55
IRF3-214ENST00000596788 RNF41Q9H4P4 317 aaPredicted RBP24.72■■□□□ 1.55
IRF3-214ENST00000596788 DNAJC18Q9H819 358 aa24.72■■□□□ 1.55
IRF3-214ENST00000596788 PI4KBQ9UBF8 816 aa24.72■■□□□ 1.55
IRF3-214ENST00000596788 SERPINB13Q9UIV8 391 aa24.72■■□□□ 1.55
IRF3-214ENST00000596788 PPP2R3BQ9Y5P8 575 aa24.72■■□□□ 1.55
IRF3-214ENST00000596788 SSC5DA1L4H1 1573 aa24.71■■□□□ 1.55
IRF3-214ENST00000596788 FAM196BA6NMK8 535 aa24.71■■□□□ 1.55
IRF3-214ENST00000596788 ADM5C9JUS6 153 aa24.71■■□□□ 1.55
IRF3-214ENST00000596788 PRDM1O75626 825 aa24.71■■□□□ 1.55
IRF3-214ENST00000596788 NEK1Q96PY6 1258 aa24.71■■□□□ 1.55
IRF3-214ENST00000596788 TM6SF1Q9BZW5 370 aa24.71■■□□□ 1.55
IRF3-214ENST00000596788 B4E1Z4 1266 aa24.7■■□□□ 1.54
IRF3-214ENST00000596788 ORC4O43929 436 aa24.7■■□□□ 1.54
IRF3-214ENST00000596788 PCP11498 1178 aaKnown RBP24.7■■□□□ 1.54
IRF3-214ENST00000596788 CPA1P15085 419 aa24.7■■□□□ 1.54
IRF3-214ENST00000596788 CASTP20810 708 aaKnown RBP24.7■■□□□ 1.54
IRF3-214ENST00000596788 CDK8P49336 464 aa24.7■■□□□ 1.54
IRF3-214ENST00000596788 PDE4BQ07343 736 aa24.7■■□□□ 1.54
IRF3-214ENST00000596788 METTL16Q86W50 562 aaKnown RBP24.7■■□□□ 1.54
IRF3-214ENST00000596788 MB21D2Q8IYB1 491 aaPredicted RBP24.7■■□□□ 1.54
IRF3-214ENST00000596788 UPF3BQ9BZI7 483 aaKnown RBP24.7■■□□□ 1.54
IRF3-214ENST00000596788 GREB1LQ9C091 1923 aaPredicted RBP24.7■■□□□ 1.54
IRF3-214ENST00000596788 RRP12Q5JTH9 1297 aaKnown RBP24.69■■□□□ 1.54
IRF3-214ENST00000596788 RALYLQ86SE5 291 aaKnown RBP24.69■■□□□ 1.54
IRF3-214ENST00000596788 SULF1Q8IWU6 871 aa24.69■■□□□ 1.54
IRF3-214ENST00000596788 CRACR2BQ8N4Y2 399 aaPredicted RBP24.69■■□□□ 1.54
IRF3-214ENST00000596788 NCOA7Q8NI08 942 aa24.69■■□□□ 1.54
IRF3-214ENST00000596788 CNNM2Q9H8M5 875 aa24.69■■□□□ 1.54
IRF3-214ENST00000596788 ZSWIM6Q9HCJ5 1215 aa24.69■■□□□ 1.54
IRF3-214ENST00000596788 TOMM22Q9NS69 142 aa24.69■■□□□ 1.54
IRF3-214ENST00000596788 ATAD5Q96QE3 1844 aa24.68■■□□□ 1.54
IRF3-214ENST00000596788 PSMA5P28066 241 aa24.68■■□□□ 1.54
IRF3-214ENST00000596788 SHMT1P34896 483 aa24.68■■□□□ 1.54
IRF3-214ENST00000596788 TRDNQ13061 729 aa24.68■■□□□ 1.54
IRF3-214ENST00000596788 RABEP1Q15276 862 aa24.68■■□□□ 1.54
IRF3-214ENST00000596788 PRAMEF18Q5VWM3 479 aa24.68■■□□□ 1.54
IRF3-214ENST00000596788 BLOC1S2Q6QNY1 142 aa24.68■■□□□ 1.54
IRF3-214ENST00000596788 KRT26Q7Z3Y9 468 aa24.68■■□□□ 1.54
IRF3-214ENST00000596788 KRT23Q9C075 422 aa24.68■■□□□ 1.54
IRF3-214ENST00000596788 SWAP70Q9UH65 585 aa24.68■■□□□ 1.54
IRF3-214ENST00000596788 PAPPA2Q9BXP8 1791 aa24.67■■□□□ 1.54
IRF3-214ENST00000596788 RASA1P20936 1047 aa24.67■■□□□ 1.54
IRF3-214ENST00000596788 NBPF12Q5TAG4 269 aaPredicted RBP24.67■■□□□ 1.54
IRF3-214ENST00000596788 DLK2Q6UY11 383 aa24.67■■□□□ 1.54
IRF3-214ENST00000596788 FOXP4Q8IVH2 680 aaPredicted RBP24.67■■□□□ 1.54
IRF3-214ENST00000596788 HERC5Q9UII4 1024 aaKnown RBP24.67■■□□□ 1.54
IRF3-214ENST00000596788 TAOK2Q9UL54 1235 aa24.67■■□□□ 1.54
IRF3-214ENST00000596788 CLEC11AQ9Y240 323 aa24.67■■□□□ 1.54
IRF3-214ENST00000596788 KDM4AO75164 1064 aa24.66■■□□□ 1.54
IRF3-214ENST00000596788 RPS6KB1P23443 525 aa24.66■■□□□ 1.54
IRF3-214ENST00000596788 ANTXR2P58335 489 aa24.66■■□□□ 1.54
IRF3-214ENST00000596788 RUFY3Q7L099 469 aa24.66■■□□□ 1.54
IRF3-214ENST00000596788 CYB5R4Q7L1T6 521 aa24.66■■□□□ 1.54
IRF3-214ENST00000596788 LDHDQ86WU2 507 aa24.66■■□□□ 1.54
IRF3-214ENST00000596788 TRIM34Q9BYJ4 488 aa24.66■■□□□ 1.54
IRF3-214ENST00000596788 GLIS2Q9BZE0 524 aaPredicted RBP24.66■■□□□ 1.54
IRF3-214ENST00000596788 MKNK2Q9HBH9 465 aa24.66■■□□□ 1.54
IRF3-214ENST00000596788 CYP46A1Q9Y6A2 500 aa24.66■■□□□ 1.54
IRF3-214ENST00000596788 USP48Q86UV5 1035 aa24.65■■□□□ 1.54
IRF3-214ENST00000596788 ESR2Q92731 530 aa24.65■■□□□ 1.54
IRF3-214ENST00000596788 TCEANC2Q96MN5 208 aa24.65■■□□□ 1.54
IRF3-214ENST00000596788 ZNF287Q9HBT7 754 aa24.65■■□□□ 1.54
IRF3-214ENST00000596788 OTOFQ9HC10 1997 aa24.65■■□□□ 1.54
IRF3-214ENST00000596788 TBC1D12O60347 775 aa24.64■■□□□ 1.54
IRF3-214ENST00000596788 RANBP6O60518 1105 aaKnown RBP24.64■■□□□ 1.54
IRF3-214ENST00000596788 HMGB1P09429 215 aaKnown RBP24.64■■□□□ 1.54
IRF3-214ENST00000596788 MAP1SQ66K74 1059 aaPredicted RBP24.64■■□□□ 1.54
IRF3-214ENST00000596788 MIGA2Q7L4E1 593 aa24.64■■□□□ 1.54
IRF3-214ENST00000596788 CHST3Q7LGC8 479 aa24.64■■□□□ 1.54
IRF3-214ENST00000596788 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.64■■□□□ 1.54
IRF3-214ENST00000596788 DOCK1Q14185 1865 aa24.64■■□□□ 1.53
IRF3-214ENST00000596788 EXOSC10Q01780 885 aaKnown RBP24.63■■□□□ 1.53
IRF3-214ENST00000596788 MAP3K10Q02779 954 aa24.63■■□□□ 1.53
IRF3-214ENST00000596788 FAM47AQ5JRC9 791 aa24.63■■□□□ 1.53
IRF3-214ENST00000596788 TATDN1Q6P1N9 297 aa24.63■■□□□ 1.53
IRF3-214ENST00000596788 DHX32Q7L7V1 743 aaKnown RBP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms