RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 CRBNQ96SW2 442 aa15.85■□□□□ 0.13
USE1-207ENST00000596136 DNAJC2Q99543 621 aaKnown RBP15.85■□□□□ 0.13
USE1-207ENST00000596136 BOLA2Q9H3K6 86 aa15.85■□□□□ 0.13
USE1-207ENST00000596136 PAG1Q9NWQ8 432 aa15.85■□□□□ 0.13
USE1-207ENST00000596136 AFG3L2Q9Y4W6 797 aa15.85■□□□□ 0.13
USE1-207ENST00000596136 ANKRD23Q86SG2 305 aa15.84■□□□□ 0.13
USE1-207ENST00000596136 MIGA1Q8NAN2 632 aa15.84■□□□□ 0.13
USE1-207ENST00000596136 EDC3Q96F86 508 aaKnown RBP15.84■□□□□ 0.13
USE1-207ENST00000596136 PICK1Q9NRD5 415 aa15.84■□□□□ 0.13
USE1-207ENST00000596136 ECHDC1Q9NTX5 307 aa15.84■□□□□ 0.13
USE1-207ENST00000596136 ZHX2Q9Y6X8 837 aa15.84■□□□□ 0.13
USE1-207ENST00000596136 FAM196BA6NMK8 535 aa15.83■□□□□ 0.12
USE1-207ENST00000596136 CAP2P40123 477 aa15.83■□□□□ 0.12
USE1-207ENST00000596136 RRP1BQ14684 758 aaKnown RBP15.83■□□□□ 0.12
USE1-207ENST00000596136 TAF1CQ15572 869 aaPredicted RBP15.83■□□□□ 0.12
USE1-207ENST00000596136 DNAJC18Q9H819 358 aa15.83■□□□□ 0.12
USE1-207ENST00000596136 ZFYVE28Q9HCC9 887 aa15.83■□□□□ 0.12
USE1-207ENST00000596136 PALD1Q9ULE6 856 aa15.83■□□□□ 0.12
USE1-207ENST00000596136 MYH1P12882 1939 aa15.83■□□□□ 0.12
USE1-207ENST00000596136 ZNF532Q9HCE3 1301 aa15.83■□□□□ 0.12
USE1-207ENST00000596136 PTPRFP10586 1907 aa15.82■□□□□ 0.12
USE1-207ENST00000596136 A0A0G2JLL6 359 aaPredicted RBP15.82■□□□□ 0.12
USE1-207ENST00000596136 TLR2O60603 784 aa15.82■□□□□ 0.12
USE1-207ENST00000596136 CAPN15O75808 1086 aa15.82■□□□□ 0.12
USE1-207ENST00000596136 ADD2P35612 726 aa15.82■□□□□ 0.12
USE1-207ENST00000596136 HDAC1Q13547 482 aaPredicted RBP15.82■□□□□ 0.12
USE1-207ENST00000596136 PRRT2Q7Z6L0 340 aaPredicted RBP15.82■□□□□ 0.12
USE1-207ENST00000596136 TBC1D2Q9BYX2 928 aa15.82■□□□□ 0.12
USE1-207ENST00000596136 MAGEB6P1A0A0J9YX57 407 aa15.81■□□□□ 0.12
USE1-207ENST00000596136 SP3Q02447 781 aa15.81■□□□□ 0.12
USE1-207ENST00000596136 GPAT2Q6NUI2 795 aa15.81■□□□□ 0.12
USE1-207ENST00000596136 ERO1AQ96HE7 468 aa15.81■□□□□ 0.12
USE1-207ENST00000596136 BCL11AQ9H165 835 aa15.81■□□□□ 0.12
USE1-207ENST00000596136 EHD4Q9H223 541 aa15.81■□□□□ 0.12
USE1-207ENST00000596136 GINM1Q9NU53 330 aa15.81■□□□□ 0.12
USE1-207ENST00000596136 MYH7P12883 1935 aa15.8■□□□□ 0.12
USE1-207ENST00000596136 ATAD5Q96QE3 1844 aa15.8■□□□□ 0.12
USE1-207ENST00000596136 HLA-DOAP06340 250 aa15.8■□□□□ 0.12
USE1-207ENST00000596136 USP5P45974 858 aa15.8■□□□□ 0.12
USE1-207ENST00000596136 UBE3CQ15386 1083 aa15.8■□□□□ 0.12
USE1-207ENST00000596136 FASTKD5Q7L8L6 764 aaKnown RBP15.8■□□□□ 0.12
USE1-207ENST00000596136 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.8■□□□□ 0.12
USE1-207ENST00000596136 SLC45A1Q9Y2W3 748 aa15.8■□□□□ 0.12
USE1-207ENST00000596136 TTC41PQ6P2S7 1318 aa15.79■□□□□ 0.12
USE1-207ENST00000596136 ADGRA2Q96PE1 1338 aa15.79■□□□□ 0.12
USE1-207ENST00000596136 PDHXO00330 501 aa15.79■□□□□ 0.12
USE1-207ENST00000596136 CAP1Q01518 475 aa15.79■□□□□ 0.12
USE1-207ENST00000596136 TATDN1Q6P1N9 297 aa15.79■□□□□ 0.12
USE1-207ENST00000596136 FBXO46Q6PJ61 603 aaPredicted RBP15.79■□□□□ 0.12
USE1-207ENST00000596136 C17orf99Q6UX52 265 aa15.79■□□□□ 0.12
USE1-207ENST00000596136 OTOP1Q7RTM1 612 aa15.79■□□□□ 0.12
USE1-207ENST00000596136 TTC6Q86TZ1 520 aa15.79■□□□□ 0.12
USE1-207ENST00000596136 GPATCH3Q96I76 525 aa15.79■□□□□ 0.12
USE1-207ENST00000596136 CRNKL1Q9BZJ0 848 aaKnown RBP15.79■□□□□ 0.12
USE1-207ENST00000596136 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.79■□□□□ 0.12
USE1-207ENST00000596136 SAP30BPQ9UHR5 308 aaKnown RBP15.79■□□□□ 0.12
USE1-207ENST00000596136 HTTP42858 3142 aa15.79■□□□□ 0.12
USE1-207ENST00000596136 DDX60LQ5H9U9 1706 aaKnown RBP15.79■□□□□ 0.12
USE1-207ENST00000596136 SALL3Q9BXA9 1300 aa15.78■□□□□ 0.12
USE1-207ENST00000596136 USP17L5A8MUK1 530 aa15.78■□□□□ 0.12
USE1-207ENST00000596136 ASNSP08243 561 aa15.78■□□□□ 0.12
USE1-207ENST00000596136 JAG1P78504 1218 aa15.78■□□□□ 0.12
USE1-207ENST00000596136 ZSCAN25Q6NSZ9 544 aa15.78■□□□□ 0.12
USE1-207ENST00000596136 LCORLQ8N3X6 602 aa15.78■□□□□ 0.12
USE1-207ENST00000596136 ZNF280CQ8ND82 737 aa15.78■□□□□ 0.12
USE1-207ENST00000596136 CD99L2Q8TCZ2 262 aa15.78■□□□□ 0.12
USE1-207ENST00000596136 GCC1Q96CN9 775 aa15.78■□□□□ 0.12
USE1-207ENST00000596136 WDR18Q9BV38 432 aa15.78■□□□□ 0.12
USE1-207ENST00000596136 TRIM75PA6NK02 468 aa15.77■□□□□ 0.12
USE1-207ENST00000596136 GABPAQ06546 454 aa15.77■□□□□ 0.12
USE1-207ENST00000596136 SPP2Q13103 211 aa15.77■□□□□ 0.12
USE1-207ENST00000596136 SLFNL1Q499Z3 407 aa15.77■□□□□ 0.12
USE1-207ENST00000596136 SH3D19Q5HYK7 790 aa15.77■□□□□ 0.12
USE1-207ENST00000596136 CCDC84Q86UT8 332 aaPredicted RBP15.77■□□□□ 0.12
USE1-207ENST00000596136 CRACR2BQ8N4Y2 399 aaPredicted RBP15.77■□□□□ 0.12
USE1-207ENST00000596136 KBTBD3Q8NAB2 608 aa15.77■□□□□ 0.12
USE1-207ENST00000596136 PROCA1Q8NCQ7 364 aaPredicted RBP15.77■□□□□ 0.12
USE1-207ENST00000596136 PI4K2BQ8TCG2 481 aa15.77■□□□□ 0.12
USE1-207ENST00000596136 DCP1AQ9NPI6 582 aaPredicted RBP15.77■□□□□ 0.12
USE1-207ENST00000596136 SERPINB13Q9UIV8 391 aa15.77■□□□□ 0.12
USE1-207ENST00000596136 TAOK2Q9UL54 1235 aa15.77■□□□□ 0.12
USE1-207ENST00000596136 HPS5Q9UPZ3 1129 aa15.77■□□□□ 0.12
USE1-207ENST00000596136 CCDC85CA6NKD9 419 aa15.76■□□□□ 0.11
USE1-207ENST00000596136 CHGBP05060 677 aa15.76■□□□□ 0.11
USE1-207ENST00000596136 RGS19P49795 217 aa15.76■□□□□ 0.11
USE1-207ENST00000596136 PLCD1P51178 756 aa15.76■□□□□ 0.11
USE1-207ENST00000596136 TRIM34Q9BYJ4 488 aa15.76■□□□□ 0.11
USE1-207ENST00000596136 ARMT1Q9H993 441 aa15.76■□□□□ 0.11
USE1-207ENST00000596136 EFCC1Q9HA90 598 aa15.76■□□□□ 0.11
USE1-207ENST00000596136 AS3MTQ9HBK9 375 aa15.76■□□□□ 0.11
USE1-207ENST00000596136 ATP8A2Q9NTI2 1148 aa15.76■□□□□ 0.11
USE1-207ENST00000596136 TRIM17Q9Y577 477 aa15.76■□□□□ 0.11
USE1-207ENST00000596136 LOC285556D6RIA3 1793 aa15.75■□□□□ 0.11
USE1-207ENST00000596136 ERC2O15083 957 aa15.75■□□□□ 0.11
USE1-207ENST00000596136 MBD4O95243 580 aa15.75■□□□□ 0.11
USE1-207ENST00000596136 BCRP11274 1271 aa15.75■□□□□ 0.11
USE1-207ENST00000596136 LACTBP83111 547 aaPredicted RBP15.75■□□□□ 0.11
USE1-207ENST00000596136 ARHGEF6Q15052 776 aa15.75■□□□□ 0.11
USE1-207ENST00000596136 TSHZ3Q63HK5 1081 aa15.75■□□□□ 0.11
USE1-207ENST00000596136 OTUD7AQ8TE49 926 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms