RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 NAA15Q9BXJ9 866 aaKnown RBP15.16■□□□□ 0.02
VRK3-209ENST00000594948 CEP131Q9UPN4 1083 aa15.16■□□□□ 0.02
VRK3-209ENST00000594948 PATL2C9JE40 543 aaKnown RBP15.15■□□□□ 0.02
VRK3-209ENST00000594948 PDE6AP16499 860 aa15.15■□□□□ 0.02
VRK3-209ENST00000594948 TUBB4BP68371 445 aa15.15■□□□□ 0.02
VRK3-209ENST00000594948 TUBB2AQ13885 445 aa15.15■□□□□ 0.02
VRK3-209ENST00000594948 PI16Q6UXB8 463 aa15.15■□□□□ 0.02
VRK3-209ENST00000594948 SPATA20Q8TB22 786 aa15.15■□□□□ 0.02
VRK3-209ENST00000594948 SMARCE1Q969G3 411 aa15.15■□□□□ 0.02
VRK3-209ENST00000594948 PANX2Q96RD6 677 aa15.15■□□□□ 0.02
VRK3-209ENST00000594948 TUBB2BQ9BVA1 445 aa15.15■□□□□ 0.02
VRK3-209ENST00000594948 KRT23Q9C075 422 aa15.15■□□□□ 0.02
VRK3-209ENST00000594948 PIH1D3Q9NQM4 214 aaKnown RBP15.15■□□□□ 0.02
VRK3-209ENST00000594948 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.15■□□□□ 0.02
VRK3-209ENST00000594948 NFE2L3Q9Y4A8 694 aa15.15■□□□□ 0.02
VRK3-209ENST00000594948 SLC12A7Q9Y666 1083 aa15.15■□□□□ 0.02
VRK3-209ENST00000594948 ZNF532Q9HCE3 1301 aa15.15■□□□□ 0.02
VRK3-209ENST00000594948 ANKRD18BA2A2Z9 1011 aa15.15■□□□□ 0.02
VRK3-209ENST00000594948 PLCD1P51178 756 aa15.15■□□□□ 0.02
VRK3-209ENST00000594948 GNG11P61952 73 aa15.15■□□□□ 0.02
VRK3-209ENST00000594948 PPP2R3AQ06190 1150 aa15.15■□□□□ 0.02
VRK3-209ENST00000594948 CC2D1AQ6P1N0 951 aaPredicted RBP15.15■□□□□ 0.02
VRK3-209ENST00000594948 LDHAL6AQ6ZMR3 332 aa15.15■□□□□ 0.02
VRK3-209ENST00000594948 TRIM22Q8IYM9 498 aa15.15■□□□□ 0.02
VRK3-209ENST00000594948 KIFC2Q96AC6 838 aa15.15■□□□□ 0.02
VRK3-209ENST00000594948 CCDC34Q96HJ3 373 aa15.15■□□□□ 0.02
VRK3-209ENST00000594948 SLC26A6Q9BXS9 759 aa15.15■□□□□ 0.02
VRK3-209ENST00000594948 ST7Q9NRC1 585 aa15.15■□□□□ 0.02
VRK3-209ENST00000594948 RAI14Q9P0K7 980 aa15.15■□□□□ 0.02
VRK3-209ENST00000594948 DENND2AQ9ULE3 1009 aa15.15■□□□□ 0.02
VRK3-209ENST00000594948 SRPRBQ9Y5M8 271 aaKnown RBP15.15■□□□□ 0.02
VRK3-209ENST00000594948 ITGB4P16144 1822 aa15.15■□□□□ 0.02
VRK3-209ENST00000594948 DLEC1Q9Y238 1755 aa15.14■□□□□ 0.01
VRK3-209ENST00000594948 ABCA3Q99758 1704 aa15.14■□□□□ 0.01
VRK3-209ENST00000594948 COL5A2P05997 1499 aaPredicted RBP15.14■□□□□ 0.01
VRK3-209ENST00000594948 A0A1B0GTH6 734 aa15.14■□□□□ 0.01
VRK3-209ENST00000594948 TOB1P50616 345 aaPredicted RBP15.14■□□□□ 0.01
VRK3-209ENST00000594948 NR1I3Q14994 352 aa15.14■□□□□ 0.01
VRK3-209ENST00000594948 GIGYF2Q6Y7W6 1299 aaKnown RBP15.14■□□□□ 0.01
VRK3-209ENST00000594948 TTLL11Q8NHH1 800 aa15.14■□□□□ 0.01
VRK3-209ENST00000594948 GOLGA1Q92805 767 aa15.14■□□□□ 0.01
VRK3-209ENST00000594948 SENP2Q9HC62 589 aa15.14■□□□□ 0.01
VRK3-209ENST00000594948 SEMA3EO15041 775 aa15.13■□□□□ 0.01
VRK3-209ENST00000594948 PDE8BO95263 885 aa15.13■□□□□ 0.01
VRK3-209ENST00000594948 DEXIO95424 95 aa15.13■□□□□ 0.01
VRK3-209ENST00000594948 TBC1D8O95759 1140 aa15.13■□□□□ 0.01
VRK3-209ENST00000594948 APPP05067 770 aa15.13■□□□□ 0.01
VRK3-209ENST00000594948 RXRAP19793 462 aa15.13■□□□□ 0.01
VRK3-209ENST00000594948 CDK11BP21127 795 aaKnown RBP15.13■□□□□ 0.01
VRK3-209ENST00000594948 DIS3L2Q8IYB7 885 aaKnown RBP15.13■□□□□ 0.01
VRK3-209ENST00000594948 TMTC2Q8N394 836 aa15.13■□□□□ 0.01
VRK3-209ENST00000594948 NKX2-3Q8TAU0 364 aa15.13■□□□□ 0.01
VRK3-209ENST00000594948 CABLES1Q8TDN4 633 aa15.13■□□□□ 0.01
VRK3-209ENST00000594948 FAM89AQ96GI7 184 aa15.13■□□□□ 0.01
VRK3-209ENST00000594948 MYH13Q9UKX3 1938 aa15.13■□□□□ 0.01
VRK3-209ENST00000594948 CCDC196A0A1B0GTZ2 297 aa15.13■□□□□ 0.01
VRK3-209ENST00000594948 IFIT3O14879 490 aaKnown RBP15.13■□□□□ 0.01
VRK3-209ENST00000594948 TRHP20396 242 aaPredicted RBP15.13■□□□□ 0.01
VRK3-209ENST00000594948 ITGA6P23229 1130 aa15.13■□□□□ 0.01
VRK3-209ENST00000594948 CTSWP56202 376 aa15.13■□□□□ 0.01
VRK3-209ENST00000594948 FMR1Q06787 632 aaKnown RBP eCLIP15.13■□□□□ 0.01
VRK3-209ENST00000594948 AKNAD1Q5T1N1 836 aa15.13■□□□□ 0.01
VRK3-209ENST00000594948 IFNL3Q8IZI9 196 aa15.13■□□□□ 0.01
VRK3-209ENST00000594948 AIDAQ96BJ3 306 aa15.13■□□□□ 0.01
VRK3-209ENST00000594948 WDR24Q96S15 920 aa15.13■□□□□ 0.01
VRK3-209ENST00000594948 CNNM1Q9NRU3 951 aa15.13■□□□□ 0.01
VRK3-209ENST00000594948 SERTAD1Q9UHV2 236 aa15.13■□□□□ 0.01
VRK3-209ENST00000594948 NHSL1Q5SYE7 1610 aa15.12■□□□□ 0.01
VRK3-209ENST00000594948 BTBD18B2RXH4 712 aa15.12■□□□□ 0.01
VRK3-209ENST00000594948 AKR1B15C9JRZ8 316 aaPredicted RBP15.12■□□□□ 0.01
VRK3-209ENST00000594948 POTEB2H3BUK9 544 aa15.12■□□□□ 0.01
VRK3-209ENST00000594948 FOXN1O15353 648 aa15.12■□□□□ 0.01
VRK3-209ENST00000594948 ACTN4O43707 911 aaKnown RBP15.12■□□□□ 0.01
VRK3-209ENST00000594948 IDH1O75874 414 aaKnown RBP15.12■□□□□ 0.01
VRK3-209ENST00000594948 CCDC175P0C221 793 aa15.12■□□□□ 0.01
VRK3-209ENST00000594948 GNAT2P19087 354 aa15.12■□□□□ 0.01
VRK3-209ENST00000594948 GOLGA8FQ08AF8 430 aa15.12■□□□□ 0.01
VRK3-209ENST00000594948 GOLGA8DPQ0D2H9 430 aa15.12■□□□□ 0.01
VRK3-209ENST00000594948 SART3Q15020 963 aaKnown RBP15.12■□□□□ 0.01
VRK3-209ENST00000594948 BRD3Q15059 726 aa15.12■□□□□ 0.01
VRK3-209ENST00000594948 PPP2R5BQ15173 497 aa15.12■□□□□ 0.01
VRK3-209ENST00000594948 TOGARAM2Q6ZUX3 1019 aa15.12■□□□□ 0.01
VRK3-209ENST00000594948 TXLNBQ8N3L3 684 aa15.12■□□□□ 0.01
VRK3-209ENST00000594948 MSL3Q8N5Y2 521 aaKnown RBP15.12■□□□□ 0.01
VRK3-209ENST00000594948 STAG1Q8WVM7 1258 aa15.12■□□□□ 0.01
VRK3-209ENST00000594948 ARFGAP3Q9NP61 516 aa15.12■□□□□ 0.01
VRK3-209ENST00000594948 ZSWIM5Q9P217 1185 aa15.12■□□□□ 0.01
VRK3-209ENST00000594948 CCDC151A5D8V7 595 aa15.11■□□□□ 0.01
VRK3-209ENST00000594948 POLR2DO15514 142 aaKnown RBP15.11■□□□□ 0.01
VRK3-209ENST00000594948 PRR29P0C7W0 189 aa15.11■□□□□ 0.01
VRK3-209ENST00000594948 IL2RBP14784 551 aa15.11■□□□□ 0.01
VRK3-209ENST00000594948 FECHP22830 423 aa15.11■□□□□ 0.01
VRK3-209ENST00000594948 RTN1Q16799 776 aa15.11■□□□□ 0.01
VRK3-209ENST00000594948 PDILTQ8N807 584 aa15.11■□□□□ 0.01
VRK3-209ENST00000594948 CCDC51Q96ER9 411 aa15.11■□□□□ 0.01
VRK3-209ENST00000594948 CARD10Q9BWT7 1032 aa15.11■□□□□ 0.01
VRK3-209ENST00000594948 NAPBQ9H115 298 aa15.11■□□□□ 0.01
VRK3-209ENST00000594948 BCL9LQ86UU0 1499 aa15.11■□□□□ 0.01
VRK3-209ENST00000594948 MYH8P13535 1937 aa15.11■□□□□ 0.01
VRK3-209ENST00000594948 MROH5Q6ZUA9 1318 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms