RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 PI4KBQ9UBF8 816 aa17.91■□□□□ 0.46
USE1-205ENST00000594724 ZNF532Q9HCE3 1301 aa17.91■□□□□ 0.46
USE1-205ENST00000594724 MAGEB6P1A0A0J9YX57 407 aa17.9■□□□□ 0.46
USE1-205ENST00000594724 CCDC85CA6NKD9 419 aa17.9■□□□□ 0.46
USE1-205ENST00000594724 USP5P45974 858 aa17.9■□□□□ 0.46
USE1-205ENST00000594724 SLFNL1Q499Z3 407 aa17.9■□□□□ 0.46
USE1-205ENST00000594724 RIOK1Q9BRS2 568 aaKnown RBP17.9■□□□□ 0.46
USE1-205ENST00000594724 ZFYVE28Q9HCC9 887 aa17.9■□□□□ 0.46
USE1-205ENST00000594724 TCRBV5S4A2TA0A5A2 114 aa17.89■□□□□ 0.45
USE1-205ENST00000594724 CXCL11O14625 94 aa17.89■□□□□ 0.45
USE1-205ENST00000594724 MOGSQ13724 837 aa17.89■□□□□ 0.45
USE1-205ENST00000594724 TSHZ3Q63HK5 1081 aa17.89■□□□□ 0.45
USE1-205ENST00000594724 TMED8Q6PL24 325 aaPredicted RBP17.89■□□□□ 0.45
USE1-205ENST00000594724 ECHDC1Q9NTX5 307 aa17.89■□□□□ 0.45
USE1-205ENST00000594724 HERC5Q9UII4 1024 aaKnown RBP17.89■□□□□ 0.45
USE1-205ENST00000594724 AFG3L2Q9Y4W6 797 aa17.89■□□□□ 0.45
USE1-205ENST00000594724 CHGBP05060 677 aa17.88■□□□□ 0.45
USE1-205ENST00000594724 CERS3Q8IU89 383 aa17.88■□□□□ 0.45
USE1-205ENST00000594724 FOXP4Q8IVH2 680 aaPredicted RBP17.88■□□□□ 0.45
USE1-205ENST00000594724 CRACR2BQ8N4Y2 399 aaPredicted RBP17.88■□□□□ 0.45
USE1-205ENST00000594724 DNAJC18Q9H819 358 aa17.88■□□□□ 0.45
USE1-205ENST00000594724 CDK5RAP2Q96SN8 1893 aa17.87■□□□□ 0.45
USE1-205ENST00000594724 TRIM75PA6NK02 468 aa17.87■□□□□ 0.45
USE1-205ENST00000594724 PDHXO00330 501 aa17.87■□□□□ 0.45
USE1-205ENST00000594724 CAP2P40123 477 aa17.87■□□□□ 0.45
USE1-205ENST00000594724 SP3Q02447 781 aa17.87■□□□□ 0.45
USE1-205ENST00000594724 ANKRD23Q86SG2 305 aa17.87■□□□□ 0.45
USE1-205ENST00000594724 METTL16Q86W50 562 aaKnown RBP17.87■□□□□ 0.45
USE1-205ENST00000594724 CD99L2Q8TCZ2 262 aa17.87■□□□□ 0.45
USE1-205ENST00000594724 HLA-DOAP06340 250 aa17.86■□□□□ 0.45
USE1-205ENST00000594724 ADD2P35612 726 aa17.86■□□□□ 0.45
USE1-205ENST00000594724 JAG1P78504 1218 aa17.86■□□□□ 0.45
USE1-205ENST00000594724 GPAT2Q6NUI2 795 aa17.86■□□□□ 0.45
USE1-205ENST00000594724 TRIM34Q9BYJ4 488 aa17.86■□□□□ 0.45
USE1-205ENST00000594724 ZCCHC17Q9NP64 241 aaKnown RBP17.86■□□□□ 0.45
USE1-205ENST00000594724 FOCADQ5VW36 1801 aa17.86■□□□□ 0.45
USE1-205ENST00000594724 A0A0G2JLL6 359 aaPredicted RBP17.85■□□□□ 0.45
USE1-205ENST00000594724 SIPA1L1O43166 1804 aa17.85■□□□□ 0.45
USE1-205ENST00000594724 TLR2O60603 784 aa17.85■□□□□ 0.45
USE1-205ENST00000594724 CAP1Q01518 475 aa17.85■□□□□ 0.45
USE1-205ENST00000594724 SHROOM1Q2M3G4 852 aaPredicted RBP17.85■□□□□ 0.45
USE1-205ENST00000594724 GADL1Q6ZQY3 521 aa17.85■□□□□ 0.45
USE1-205ENST00000594724 PRRT2Q7Z6L0 340 aaPredicted RBP17.85■□□□□ 0.45
USE1-205ENST00000594724 LCORLQ8N3X6 602 aa17.85■□□□□ 0.45
USE1-205ENST00000594724 OTUD7AQ8TE49 926 aaPredicted RBP17.85■□□□□ 0.45
USE1-205ENST00000594724 ERO1AQ96HE7 468 aa17.85■□□□□ 0.45
USE1-205ENST00000594724 GPATCH3Q96I76 525 aa17.85■□□□□ 0.45
USE1-205ENST00000594724 CRNKL1Q9BZJ0 848 aaKnown RBP17.85■□□□□ 0.45
USE1-205ENST00000594724 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.85■□□□□ 0.45
USE1-205ENST00000594724 ARMT1Q9H993 441 aa17.85■□□□□ 0.45
USE1-205ENST00000594724 TRIM17Q9Y577 477 aa17.85■□□□□ 0.45
USE1-205ENST00000594724 DOCK1Q14185 1865 aa17.84■□□□□ 0.45
USE1-205ENST00000594724 GDF11O95390 407 aa17.84■□□□□ 0.45
USE1-205ENST00000594724 SPP2Q13103 211 aa17.84■□□□□ 0.45
USE1-205ENST00000594724 PKN2Q16513 984 aaKnown RBP17.84■□□□□ 0.45
USE1-205ENST00000594724 FASTKD5Q7L8L6 764 aaKnown RBP17.84■□□□□ 0.45
USE1-205ENST00000594724 OTOP1Q7RTM1 612 aa17.84■□□□□ 0.45
USE1-205ENST00000594724 EXOC6Q8TAG9 804 aa17.84■□□□□ 0.45
USE1-205ENST00000594724 SDR42E1Q8WUS8 393 aa17.84■□□□□ 0.45
USE1-205ENST00000594724 SUPT16HQ9Y5B9 1047 aaKnown RBP17.84■□□□□ 0.45
USE1-205ENST00000594724 USP17L5A8MUK1 530 aa17.83■□□□□ 0.44
USE1-205ENST00000594724 MBD4O95243 580 aa17.83■□□□□ 0.44
USE1-205ENST00000594724 POLR3DP05423 398 aaPredicted RBP17.83■□□□□ 0.44
USE1-205ENST00000594724 PLCD1P51178 756 aa17.83■□□□□ 0.44
USE1-205ENST00000594724 ANKRD45Q5TZF3 282 aa17.83■□□□□ 0.44
USE1-205ENST00000594724 TTC6Q86TZ1 520 aa17.83■□□□□ 0.44
USE1-205ENST00000594724 CPA4Q9UI42 421 aa17.83■□□□□ 0.44
USE1-205ENST00000594724 HPS5Q9UPZ3 1129 aa17.83■□□□□ 0.44
USE1-205ENST00000594724 PRKAB2O43741 272 aa17.82■□□□□ 0.44
USE1-205ENST00000594724 ECM2O94769 699 aaPredicted RBP17.82■□□□□ 0.44
USE1-205ENST00000594724 CYP2C8P10632 490 aa17.82■□□□□ 0.44
USE1-205ENST00000594724 EVX2Q03828 476 aa17.82■□□□□ 0.44
USE1-205ENST00000594724 HDAC1Q13547 482 aaPredicted RBP17.82■□□□□ 0.44
USE1-205ENST00000594724 UBE3CQ15386 1083 aa17.82■□□□□ 0.44
USE1-205ENST00000594724 FBXO46Q6PJ61 603 aaPredicted RBP17.82■□□□□ 0.44
USE1-205ENST00000594724 C17orf99Q6UX52 265 aa17.82■□□□□ 0.44
USE1-205ENST00000594724 ZNF280CQ8ND82 737 aa17.82■□□□□ 0.44
USE1-205ENST00000594724 EFCC1Q9HA90 598 aa17.82■□□□□ 0.44
USE1-205ENST00000594724 DCP1AQ9NPI6 582 aaPredicted RBP17.82■□□□□ 0.44
USE1-205ENST00000594724 MCM9Q9NXL9 1143 aa17.82■□□□□ 0.44
USE1-205ENST00000594724 SERPINB13Q9UIV8 391 aa17.82■□□□□ 0.44
USE1-205ENST00000594724 MYH1P12882 1939 aa17.82■□□□□ 0.44
USE1-205ENST00000594724 PHIPQ8WWQ0 1821 aa17.82■□□□□ 0.44
USE1-205ENST00000594724 ASNSP08243 561 aa17.81■□□□□ 0.44
USE1-205ENST00000594724 ZSCAN25Q6NSZ9 544 aa17.81■□□□□ 0.44
USE1-205ENST00000594724 ARHGAP39Q9C0H5 1083 aa17.81■□□□□ 0.44
USE1-205ENST00000594724 PUS7LQ9H0K6 701 aaKnown RBP17.81■□□□□ 0.44
USE1-205ENST00000594724 ZBTB47Q9UFB7 747 aaPredicted RBP17.81■□□□□ 0.44
USE1-205ENST00000594724 TTC41PQ6P2S7 1318 aa17.8■□□□□ 0.44
USE1-205ENST00000594724 HMGCS2P54868 508 aa17.8■□□□□ 0.44
USE1-205ENST00000594724 TATDN1Q6P1N9 297 aa17.8■□□□□ 0.44
USE1-205ENST00000594724 KBTBD3Q8NAB2 608 aa17.8■□□□□ 0.44
USE1-205ENST00000594724 PI4K2BQ8TCG2 481 aa17.8■□□□□ 0.44
USE1-205ENST00000594724 GCC1Q96CN9 775 aa17.8■□□□□ 0.44
USE1-205ENST00000594724 EHD4Q9H223 541 aa17.8■□□□□ 0.44
USE1-205ENST00000594724 AS3MTQ9HBK9 375 aa17.8■□□□□ 0.44
USE1-205ENST00000594724 ATAD5Q96QE3 1844 aa17.79■□□□□ 0.44
USE1-205ENST00000594724 ADGRA2Q96PE1 1338 aa17.79■□□□□ 0.44
USE1-205ENST00000594724 GH2P01242 217 aa17.79■□□□□ 0.44
USE1-205ENST00000594724 CYP2D6P10635 497 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms