RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 DNAJC18Q9H819 358 aa13.17□□□□□ -0.3
USE1-203ENST00000593597 AGTPBP1Q9UPW5 1226 aa13.17□□□□□ -0.3
USE1-203ENST00000593597 SLC45A1Q9Y2W3 748 aa13.17□□□□□ -0.3
USE1-203ENST00000593597 RLBP1P12271 317 aa13.16□□□□□ -0.3
USE1-203ENST00000593597 ELNP15502 786 aa13.16□□□□□ -0.3
USE1-203ENST00000593597 GJA8P48165 433 aa13.16□□□□□ -0.3
USE1-203ENST00000593597 FCGRTP55899 365 aa13.16□□□□□ -0.3
USE1-203ENST00000593597 FASTKD5Q7L8L6 764 aaKnown RBP13.16□□□□□ -0.3
USE1-203ENST00000593597 SLF2Q8IX21 1173 aa13.16□□□□□ -0.3
USE1-203ENST00000593597 UNC93B1Q9H1C4 597 aa13.16□□□□□ -0.3
USE1-203ENST00000593597 SNRKQ9NRH2 765 aa13.16□□□□□ -0.3
USE1-203ENST00000593597 TLR7Q9NYK1 1049 aaKnown RBP13.16□□□□□ -0.3
USE1-203ENST00000593597 FRMPD3Q5JV73 1810 aa13.16□□□□□ -0.3
USE1-203ENST00000593597 NAV1Q8NEY1 1877 aa13.15□□□□□ -0.3
USE1-203ENST00000593597 CYP2E1P05181 493 aaPredicted RBP13.15□□□□□ -0.3
USE1-203ENST00000593597 GJB1P08034 283 aa13.15□□□□□ -0.3
USE1-203ENST00000593597 TNNI3KQ59H18 835 aa13.15□□□□□ -0.3
USE1-203ENST00000593597 TEX11Q8IYF3 940 aa13.15□□□□□ -0.3
USE1-203ENST00000593597 SSH3Q8TE77 659 aa13.15□□□□□ -0.3
USE1-203ENST00000593597 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.15□□□□□ -0.3
USE1-203ENST00000593597 RAI14Q9P0K7 980 aa13.15□□□□□ -0.3
USE1-203ENST00000593597 FPGT-TNNI3KV9GXZ4 949 aa13.15□□□□□ -0.3
USE1-203ENST00000593597 LAMA3Q16787 3333 aa13.15□□□□□ -0.3
USE1-203ENST00000593597 PEX10O60683 326 aa13.14□□□□□ -0.31
USE1-203ENST00000593597 HOXD10P28358 340 aa13.14□□□□□ -0.31
USE1-203ENST00000593597 CAP2P40123 477 aa13.14□□□□□ -0.31
USE1-203ENST00000593597 FLT3LGP49771 235 aa13.14□□□□□ -0.31
USE1-203ENST00000593597 G3BP1Q13283 466 aaKnown RBP eCLIP13.14□□□□□ -0.31
USE1-203ENST00000593597 ANKRD13CQ8N6S4 541 aa13.14□□□□□ -0.31
USE1-203ENST00000593597 GPR108Q9NPR9 543 aa13.14□□□□□ -0.31
USE1-203ENST00000593597 PIH1D3Q9NQM4 214 aaKnown RBP13.14□□□□□ -0.31
USE1-203ENST00000593597 DBNLQ9UJU6 430 aaKnown RBP13.14□□□□□ -0.31
USE1-203ENST00000593597 FLT1P17948 1338 aa13.13□□□□□ -0.31
USE1-203ENST00000593597 IPO8O15397 1037 aaKnown RBP13.13□□□□□ -0.31
USE1-203ENST00000593597 ADCY3O60266 1144 aa13.13□□□□□ -0.31
USE1-203ENST00000593597 INHAP05111 366 aa13.13□□□□□ -0.31
USE1-203ENST00000593597 UQCRFS1P1P0C7P4 283 aa13.13□□□□□ -0.31
USE1-203ENST00000593597 HMGCS2P54868 508 aa13.13□□□□□ -0.31
USE1-203ENST00000593597 GSTO1P78417 241 aa13.13□□□□□ -0.31
USE1-203ENST00000593597 ATP8B2P98198 1209 aa13.13□□□□□ -0.31
USE1-203ENST00000593597 SPP2Q13103 211 aa13.13□□□□□ -0.31
USE1-203ENST00000593597 IRF5Q13568 498 aa13.13□□□□□ -0.31
USE1-203ENST00000593597 GORABQ5T7V8 394 aa13.13□□□□□ -0.31
USE1-203ENST00000593597 PROCA1Q8NCQ7 364 aaPredicted RBP13.13□□□□□ -0.31
USE1-203ENST00000593597 SLAIN1Q8ND83 568 aa13.13□□□□□ -0.31
USE1-203ENST00000593597 U2AF1L4Q8WU68 220 aaKnown RBP13.13□□□□□ -0.31
USE1-203ENST00000593597 RNF208Q9H0X6 261 aa13.13□□□□□ -0.31
USE1-203ENST00000593597 AATFQ9NY61 560 aaKnown RBP eCLIP13.13□□□□□ -0.31
USE1-203ENST00000593597 MAP4K4O95819 1239 aaPredicted RBP13.12□□□□□ -0.31
USE1-203ENST00000593597 LDHCP07864 332 aa13.12□□□□□ -0.31
USE1-203ENST00000593597 ZAP70P43403 619 aa13.12□□□□□ -0.31
USE1-203ENST00000593597 DYNLL1P63167 89 aaKnown RBP13.12□□□□□ -0.31
USE1-203ENST00000593597 FAM110CQ1W6H9 321 aa13.12□□□□□ -0.31
USE1-203ENST00000593597 SH3D19Q5HYK7 790 aa13.12□□□□□ -0.31
USE1-203ENST00000593597 ZKSCAN2Q63HK3 967 aa13.12□□□□□ -0.31
USE1-203ENST00000593597 POTEEQ6S8J3 1075 aa13.12□□□□□ -0.31
USE1-203ENST00000593597 METTL16Q86W50 562 aaKnown RBP13.12□□□□□ -0.31
USE1-203ENST00000593597 MAPKAPK5Q8IW41 473 aa13.12□□□□□ -0.31
USE1-203ENST00000593597 ZNF280CQ8ND82 737 aa13.12□□□□□ -0.31
USE1-203ENST00000593597 SMCR8Q8TEV9 937 aaPredicted RBP13.12□□□□□ -0.31
USE1-203ENST00000593597 PRO3102Q9H379 93 aa13.12□□□□□ -0.31
USE1-203ENST00000593597 LRP2BPQ9P2M1 347 aa13.12□□□□□ -0.31
USE1-203ENST00000593597 NDUFB9Q9Y6M9 179 aa13.12□□□□□ -0.31
USE1-203ENST00000593597 TNPO2O14787 897 aaKnown RBP13.11□□□□□ -0.31
USE1-203ENST00000593597 PPP4CP60510 307 aa13.11□□□□□ -0.31
USE1-203ENST00000593597 TRIM32Q13049 653 aa13.11□□□□□ -0.31
USE1-203ENST00000593597 NAA16Q6N069 864 aaPredicted RBP13.11□□□□□ -0.31
USE1-203ENST00000593597 CHRDL2Q6WN34 429 aa13.11□□□□□ -0.31
USE1-203ENST00000593597 PXYLP1Q8TE99 480 aa13.11□□□□□ -0.31
USE1-203ENST00000593597 TGFBRAP1Q8WUH2 860 aa13.11□□□□□ -0.31
USE1-203ENST00000593597 EAF2Q96CJ1 260 aaPredicted RBP13.11□□□□□ -0.31
USE1-203ENST00000593597 ASCC2Q9H1I8 757 aaPredicted RBP13.11□□□□□ -0.31
USE1-203ENST00000593597 PAK6Q9NQU5 681 aaPredicted RBP13.11□□□□□ -0.31
USE1-203ENST00000593597 NOP58Q9Y2X3 529 aaKnown RBP13.11□□□□□ -0.31
USE1-203ENST00000593597 RLFQ13129 1914 aa13.1□□□□□ -0.31
USE1-203ENST00000593597 USP17L5A8MUK1 530 aa13.1□□□□□ -0.31
USE1-203ENST00000593597 ZBTB7BO15156 539 aaPredicted RBP13.1□□□□□ -0.31
USE1-203ENST00000593597 GDF11O95390 407 aa13.1□□□□□ -0.31
USE1-203ENST00000593597 SGPL1O95470 568 aa13.1□□□□□ -0.31
USE1-203ENST00000593597 UBXN2AP68543 259 aa13.1□□□□□ -0.31
USE1-203ENST00000593597 MTMR2Q13614 643 aa13.1□□□□□ -0.31
USE1-203ENST00000593597 TTC39AQ5SRH9 613 aa13.1□□□□□ -0.31
USE1-203ENST00000593597 ZNF512BQ96KM6 892 aaPredicted RBP13.1□□□□□ -0.31
USE1-203ENST00000593597 CCDC8Q9H0W5 538 aaPredicted RBP13.1□□□□□ -0.31
USE1-203ENST00000593597 TXNRD2Q9NNW7 524 aa13.1□□□□□ -0.31
USE1-203ENST00000593597 RBM27Q9P2N5 1060 aaKnown RBP13.1□□□□□ -0.31
USE1-203ENST00000593597 BIN2Q9UBW5 565 aaPredicted RBP13.1□□□□□ -0.31
USE1-203ENST00000593597 HERC5Q9UII4 1024 aaKnown RBP13.1□□□□□ -0.31
USE1-203ENST00000593597 GJD2Q9UKL4 321 aa13.1□□□□□ -0.31
USE1-203ENST00000593597 PALD1Q9ULE6 856 aa13.1□□□□□ -0.31
USE1-203ENST00000593597 DNAH12Q6ZR08 3092 aa13.09□□□□□ -0.31
USE1-203ENST00000593597 PARP14Q460N5 1801 aa13.09□□□□□ -0.31
USE1-203ENST00000593597 SURF6O75683 361 aaKnown RBP13.09□□□□□ -0.31
USE1-203ENST00000593597 FARP2O94887 1054 aaPredicted RBP13.09□□□□□ -0.31
USE1-203ENST00000593597 NKX2-3Q8TAU0 364 aa13.09□□□□□ -0.31
USE1-203ENST00000593597 DIS3LQ8TF46 1054 aaKnown RBP13.09□□□□□ -0.31
USE1-203ENST00000593597 WDR18Q9BV38 432 aa13.09□□□□□ -0.31
USE1-203ENST00000593597 CRISPLD2Q9H0B8 497 aa13.09□□□□□ -0.31
USE1-203ENST00000593597 ANTXR1Q9H6X2 564 aa13.09□□□□□ -0.31
USE1-203ENST00000593597 PI4KBQ9UBF8 816 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms