RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 UNC93B1Q9H1C4 597 aa20.17■□□□□ 0.82
LIG1-205ENST00000593425 RAI14Q9P0K7 980 aa20.17■□□□□ 0.82
LIG1-205ENST00000593425 MYO5AQ9Y4I1 1855 aaKnown RBP20.17■□□□□ 0.82
LIG1-205ENST00000593425 FOCADQ5VW36 1801 aa20.16■□□□□ 0.82
LIG1-205ENST00000593425 TNPO2O14787 897 aaKnown RBP20.16■□□□□ 0.82
LIG1-205ENST00000593425 ADCY3O60266 1144 aa20.16■□□□□ 0.82
LIG1-205ENST00000593425 ELNP15502 786 aa20.16■□□□□ 0.82
LIG1-205ENST00000593425 G3BP1Q13283 466 aaKnown RBP eCLIP20.16■□□□□ 0.82
LIG1-205ENST00000593425 U2AF1L4Q8WU68 220 aaKnown RBP20.16■□□□□ 0.82
LIG1-205ENST00000593425 IPO8O15397 1037 aaKnown RBP20.15■□□□□ 0.82
LIG1-205ENST00000593425 MAP4K4O95819 1239 aaPredicted RBP20.15■□□□□ 0.82
LIG1-205ENST00000593425 ANKRD13CQ8N6S4 541 aa20.15■□□□□ 0.82
LIG1-205ENST00000593425 DPF3Q92784 378 aa20.15■□□□□ 0.82
LIG1-205ENST00000593425 DOCK3Q8IZD9 2030 aa20.15■□□□□ 0.82
LIG1-205ENST00000593425 INHAP05111 366 aa20.14■□□□□ 0.81
LIG1-205ENST00000593425 SPP2Q13103 211 aa20.14■□□□□ 0.81
LIG1-205ENST00000593425 TEX11Q8IYF3 940 aa20.14■□□□□ 0.81
LIG1-205ENST00000593425 TMEM57Q8N5G2 664 aa20.14■□□□□ 0.81
LIG1-205ENST00000593425 PROCA1Q8NCQ7 364 aaPredicted RBP20.14■□□□□ 0.81
LIG1-205ENST00000593425 SH3RF3Q8TEJ3 882 aaPredicted RBP20.14■□□□□ 0.81
LIG1-205ENST00000593425 LRP2BPQ9P2M1 347 aa20.14■□□□□ 0.81
LIG1-205ENST00000593425 UQCRFS1P1P0C7P4 283 aa20.13■□□□□ 0.81
LIG1-205ENST00000593425 CAP2P40123 477 aa20.13■□□□□ 0.81
LIG1-205ENST00000593425 IRF5Q13568 498 aa20.13■□□□□ 0.81
LIG1-205ENST00000593425 CHRDL2Q6WN34 429 aa20.13■□□□□ 0.81
LIG1-205ENST00000593425 ZNF280CQ8ND82 737 aa20.13■□□□□ 0.81
LIG1-205ENST00000593425 PXYLP1Q8TE99 480 aa20.13■□□□□ 0.81
LIG1-205ENST00000593425 SNRKQ9NRH2 765 aa20.13■□□□□ 0.81
LIG1-205ENST00000593425 PNMA3Q9UL41 463 aa20.13■□□□□ 0.81
LIG1-205ENST00000593425 FARP2O94887 1054 aaPredicted RBP20.12■□□□□ 0.81
LIG1-205ENST00000593425 SGPL1O95470 568 aa20.12■□□□□ 0.81
LIG1-205ENST00000593425 HMGCS2P54868 508 aa20.12■□□□□ 0.81
LIG1-205ENST00000593425 FAM110CQ1W6H9 321 aa20.12■□□□□ 0.81
LIG1-205ENST00000593425 DBNDD2Q9BQY9 259 aa20.12■□□□□ 0.81
LIG1-205ENST00000593425 AATFQ9NY61 560 aaKnown RBP eCLIP20.12■□□□□ 0.81
LIG1-205ENST00000593425 POLA2Q14181 598 aa20.11■□□□□ 0.81
LIG1-205ENST00000593425 TNNI3KQ59H18 835 aa20.11■□□□□ 0.81
LIG1-205ENST00000593425 ADGRA1Q86SQ6 560 aa20.11■□□□□ 0.81
LIG1-205ENST00000593425 HTATIP2Q9BUP3 242 aa20.11■□□□□ 0.81
LIG1-205ENST00000593425 TAOK2Q9UL54 1235 aa20.11■□□□□ 0.81
LIG1-205ENST00000593425 FPGT-TNNI3KV9GXZ4 949 aa20.11■□□□□ 0.81
LIG1-205ENST00000593425 PLXNB2O15031 1838 aa20.11■□□□□ 0.81
LIG1-205ENST00000593425 USP17L5A8MUK1 530 aa20.1■□□□□ 0.81
LIG1-205ENST00000593425 TTC39AQ5SRH9 613 aa20.1■□□□□ 0.81
LIG1-205ENST00000593425 NAA16Q6N069 864 aaPredicted RBP20.1■□□□□ 0.81
LIG1-205ENST00000593425 COA7Q96BR5 231 aa20.1■□□□□ 0.81
LIG1-205ENST00000593425 TBC1D2Q9BYX2 928 aa20.1■□□□□ 0.81
LIG1-205ENST00000593425 DNAJC18Q9H819 358 aa20.1■□□□□ 0.81
LIG1-205ENST00000593425 GPR108Q9NPR9 543 aa20.1■□□□□ 0.81
LIG1-205ENST00000593425 HERC5Q9UII4 1024 aaKnown RBP20.1■□□□□ 0.81
LIG1-205ENST00000593425 ALPK3Q96L96 1907 aa20.1■□□□□ 0.81
LIG1-205ENST00000593425 CYP2E1P05181 493 aaPredicted RBP20.09■□□□□ 0.81
LIG1-205ENST00000593425 SH3D19Q5HYK7 790 aa20.09■□□□□ 0.81
LIG1-205ENST00000593425 MAPKAPK5Q8IW41 473 aa20.09■□□□□ 0.81
LIG1-205ENST00000593425 SSH3Q8TE77 659 aa20.09■□□□□ 0.81
LIG1-205ENST00000593425 DEFB118Q96PH6 123 aa20.09■□□□□ 0.81
LIG1-205ENST00000593425 NOL10Q9BSC4 688 aaKnown RBP20.09■□□□□ 0.81
LIG1-205ENST00000593425 ASCC2Q9H1I8 757 aaPredicted RBP20.09■□□□□ 0.81
LIG1-205ENST00000593425 C1orf115Q9H7X2 142 aa20.09■□□□□ 0.81
LIG1-205ENST00000593425 RBM27Q9P2N5 1060 aaKnown RBP20.09■□□□□ 0.81
LIG1-205ENST00000593425 FLT1P17948 1338 aa20.08■□□□□ 0.81
LIG1-205ENST00000593425 JAG1P78504 1218 aa20.08■□□□□ 0.81
LIG1-205ENST00000593425 SHROOM1Q2M3G4 852 aaPredicted RBP20.08■□□□□ 0.81
LIG1-205ENST00000593425 ZKSCAN2Q63HK3 967 aa20.08■□□□□ 0.81
LIG1-205ENST00000593425 TGFBRAP1Q8WUH2 860 aa20.08■□□□□ 0.81
LIG1-205ENST00000593425 AS3MTQ9HBK9 375 aa20.08■□□□□ 0.81
LIG1-205ENST00000593425 PAK6Q9NQU5 681 aaPredicted RBP20.08■□□□□ 0.81
LIG1-205ENST00000593425 PI4KBQ9UBF8 816 aa20.08■□□□□ 0.81
LIG1-205ENST00000593425 BAG3O95817 575 aa20.07■□□□□ 0.8
LIG1-205ENST00000593425 GCLCP48506 637 aaPredicted RBP20.07■□□□□ 0.8
LIG1-205ENST00000593425 PPP4CP60510 307 aa20.07■□□□□ 0.8
LIG1-205ENST00000593425 ATP8B2P98198 1209 aa20.07■□□□□ 0.8
LIG1-205ENST00000593425 PABPC4Q13310 644 aaKnown RBP eCLIP20.07■□□□□ 0.8
LIG1-205ENST00000593425 OS9Q13438 667 aaPredicted RBP20.07■□□□□ 0.8
LIG1-205ENST00000593425 MTMR2Q13614 643 aa20.07■□□□□ 0.8
LIG1-205ENST00000593425 CCDC158Q5M9N0 1113 aa20.07■□□□□ 0.8
LIG1-205ENST00000593425 DHX36Q9H2U1 1008 aaKnown RBP20.07■□□□□ 0.8
LIG1-205ENST00000593425 PLCG2P16885 1265 aa20.06■□□□□ 0.8
LIG1-205ENST00000593425 ZAP70P43403 619 aa20.06■□□□□ 0.8
LIG1-205ENST00000593425 CRISPLD2Q9H0B8 497 aa20.06■□□□□ 0.8
LIG1-205ENST00000593425 PRO3102Q9H379 93 aa20.06■□□□□ 0.8
LIG1-205ENST00000593425 PIH1D3Q9NQM4 214 aaKnown RBP20.06■□□□□ 0.8
LIG1-205ENST00000593425 TLR7Q9NYK1 1049 aaKnown RBP20.06■□□□□ 0.8
LIG1-205ENST00000593425 ZBTB7BO15156 539 aaPredicted RBP20.05■□□□□ 0.8
LIG1-205ENST00000593425 SURF6O75683 361 aaKnown RBP20.05■□□□□ 0.8
LIG1-205ENST00000593425 TFRCP02786 760 aaKnown RBP20.05■□□□□ 0.8
LIG1-205ENST00000593425 WDR18Q9BV38 432 aa20.05■□□□□ 0.8
LIG1-205ENST00000593425 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.05■□□□□ 0.8
LIG1-205ENST00000593425 DBNLQ9UJU6 430 aaKnown RBP20.05■□□□□ 0.8
LIG1-205ENST00000593425 GJD2Q9UKL4 321 aa20.05■□□□□ 0.8
LIG1-205ENST00000593425 PALD1Q9ULE6 856 aa20.05■□□□□ 0.8
LIG1-205ENST00000593425 MYH1P12882 1939 aa20.05■□□□□ 0.8
LIG1-205ENST00000593425 PEX10O60683 326 aa20.04■□□□□ 0.8
LIG1-205ENST00000593425 GDF11O95390 407 aa20.04■□□□□ 0.8
LIG1-205ENST00000593425 ASNSP08243 561 aa20.04■□□□□ 0.8
LIG1-205ENST00000593425 BACE1P56817 501 aa20.04■□□□□ 0.8
LIG1-205ENST00000593425 DYNLL1P63167 89 aaKnown RBP20.04■□□□□ 0.8
LIG1-205ENST00000593425 TRIM32Q13049 653 aa20.04■□□□□ 0.8
LIG1-205ENST00000593425 METTL16Q86W50 562 aaKnown RBP20.04■□□□□ 0.8
LIG1-205ENST00000593425 ZNF512BQ96KM6 892 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms