RNA–Protein interactions for RNA: ENST00000593013.5

HDAC5-212, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 1,745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-212ENST00000593013 TRIM44Q96DX7 344 aaPredicted RBP21.81■■□□□ 1.08
HDAC5-212ENST00000593013 STK36Q9NRP7 1315 aa21.81■■□□□ 1.08
HDAC5-212ENST00000593013 FOSBP53539 338 aa21.8■■□□□ 1.08
HDAC5-212ENST00000593013 KIAA2012Q0VF49 1180 aa21.8■■□□□ 1.08
HDAC5-212ENST00000593013 HS1BP3Q53T59 392 aa21.8■■□□□ 1.08
HDAC5-212ENST00000593013 CPLX2Q6PUV4 134 aaKnown RBP21.8■■□□□ 1.08
HDAC5-212ENST00000593013 TDRD7Q8NHU6 1098 aaKnown RBP21.8■■□□□ 1.08
HDAC5-212ENST00000593013 NSUN4Q96CB9 384 aaKnown RBP21.8■■□□□ 1.08
HDAC5-212ENST00000593013 NUP62CLQ9H1M0 184 aa21.8■■□□□ 1.08
HDAC5-212ENST00000593013 SENP2Q9HC62 589 aa21.8■■□□□ 1.08
HDAC5-212ENST00000593013 CD209Q9NNX6 404 aa21.8■■□□□ 1.08
HDAC5-212ENST00000593013 RRAGDQ9NQL2 400 aaPredicted RBP21.8■■□□□ 1.08
HDAC5-212ENST00000593013 IFIT3O14879 490 aaKnown RBP21.8■■□□□ 1.08
HDAC5-212ENST00000593013 IL1R1P14778 569 aa21.8■■□□□ 1.08
HDAC5-212ENST00000593013 YBX3P16989 372 aaKnown RBP eCLIP21.8■■□□□ 1.08
HDAC5-212ENST00000593013 NTRK3Q16288 839 aa21.8■■□□□ 1.08
HDAC5-212ENST00000593013 BRAPQ7Z569 592 aa21.8■■□□□ 1.08
HDAC5-212ENST00000593013 RNF214Q8ND24 703 aa21.8■■□□□ 1.08
HDAC5-212ENST00000593013 USP28Q96RU2 1077 aa21.8■■□□□ 1.08
HDAC5-212ENST00000593013 INCENPQ9NQS7 918 aa21.8■■□□□ 1.08
HDAC5-212ENST00000593013 COA1Q9GZY4 146 aa21.79■■□□□ 1.08
HDAC5-212ENST00000593013 VPS33BQ9H267 617 aa21.79■■□□□ 1.08
HDAC5-212ENST00000593013 CLSTN2Q9H4D0 955 aa21.79■■□□□ 1.08
HDAC5-212ENST00000593013 RTN4Q9NQC3 1192 aaKnown RBP21.79■■□□□ 1.08
HDAC5-212ENST00000593013 FAM217BQ9NTX9 383 aaPredicted RBP21.79■■□□□ 1.08
HDAC5-212ENST00000593013 LTBP3Q9NS15 1303 aa21.79■■□□□ 1.08
HDAC5-212ENST00000593013 GOLGA8AA7E2F4 631 aa21.78■■□□□ 1.08
HDAC5-212ENST00000593013 PCP11498 1178 aaKnown RBP21.78■■□□□ 1.08
HDAC5-212ENST00000593013 CDC27P30260 824 aa21.78■■□□□ 1.08
HDAC5-212ENST00000593013 GUCY1B3Q02153 619 aa21.78■■□□□ 1.08
HDAC5-212ENST00000593013 SART3Q15020 963 aaKnown RBP21.78■■□□□ 1.08
HDAC5-212ENST00000593013 MAP3K11Q16584 847 aa21.78■■□□□ 1.08
HDAC5-212ENST00000593013 AOC3Q16853 763 aa21.78■■□□□ 1.08
HDAC5-212ENST00000593013 RAB11FIP4Q86YS3 637 aa21.78■■□□□ 1.08
HDAC5-212ENST00000593013 TAOK3Q9H2K8 898 aa21.78■■□□□ 1.08
HDAC5-212ENST00000593013 ZNF277Q9NRM2 450 aaPredicted RBP21.78■■□□□ 1.08
HDAC5-212ENST00000593013 RTEL1Q9NZ71 1219 aa21.78■■□□□ 1.08
HDAC5-212ENST00000593013 FGRP09769 529 aa21.77■■□□□ 1.08
HDAC5-212ENST00000593013 GPR162Q16538 588 aa21.77■■□□□ 1.08
HDAC5-212ENST00000593013 NFXL1Q6ZNB6 911 aa21.77■■□□□ 1.08
HDAC5-212ENST00000593013 TMTC2Q8N394 836 aa21.77■■□□□ 1.08
HDAC5-212ENST00000593013 SDR42E1Q8WUS8 393 aa21.77■■□□□ 1.08
HDAC5-212ENST00000593013 DACT1Q9NYF0 836 aa21.77■■□□□ 1.08
HDAC5-212ENST00000593013 PPFIA3O75145 1194 aa21.77■■□□□ 1.08
HDAC5-212ENST00000593013 TPRNQ4KMQ1 711 aa21.77■■□□□ 1.08
HDAC5-212ENST00000593013 MICU3Q86XE3 530 aa21.77■■□□□ 1.08
HDAC5-212ENST00000593013 BICD2Q8TD16 824 aa21.77■■□□□ 1.08
HDAC5-212ENST00000593013 SLC12A7Q9Y666 1083 aa21.77■■□□□ 1.08
HDAC5-212ENST00000593013 MYH2Q9UKX2 1941 aa21.77■■□□□ 1.07
HDAC5-212ENST00000593013 COL4A5P29400 1685 aa21.76■■□□□ 1.07
HDAC5-212ENST00000593013 CCDC69A6NI79 296 aa21.76■■□□□ 1.07
HDAC5-212ENST00000593013 PPIP5K2O43314 1243 aa21.76■■□□□ 1.07
HDAC5-212ENST00000593013 CCDC192P0DO97 292 aa21.76■■□□□ 1.07
HDAC5-212ENST00000593013 DYNLL1P63167 89 aaKnown RBP21.76■■□□□ 1.07
HDAC5-212ENST00000593013 KIF23Q02241 960 aaPredicted RBP21.76■■□□□ 1.07
HDAC5-212ENST00000593013 MECOMQ03112 1051 aa21.76■■□□□ 1.07
HDAC5-212ENST00000593013 DOK7Q18PE1 504 aa21.76■■□□□ 1.07
HDAC5-212ENST00000593013 ESPNB1AK53 854 aa21.75■■□□□ 1.07
HDAC5-212ENST00000593013 WTAPQ15007 396 aa21.75■■□□□ 1.07
HDAC5-212ENST00000593013 ALG1Q9BT22 464 aa21.75■■□□□ 1.07
HDAC5-212ENST00000593013 POLR3EQ9NVU0 708 aa21.75■■□□□ 1.07
HDAC5-212ENST00000593013 SCN9AQ15858 1988 aa21.75■■□□□ 1.07
HDAC5-212ENST00000593013 RANBP6O60518 1105 aaKnown RBP21.75■■□□□ 1.07
HDAC5-212ENST00000593013 YEATS4O95619 227 aa21.75■■□□□ 1.07
HDAC5-212ENST00000593013 IFNAR1P17181 557 aa21.75■■□□□ 1.07
HDAC5-212ENST00000593013 PRELPP51888 382 aa21.75■■□□□ 1.07
HDAC5-212ENST00000593013 MYSM1Q5VVJ2 828 aa21.75■■□□□ 1.07
HDAC5-212ENST00000593013 SPTY2D1Q68D10 685 aaPredicted RBP21.75■■□□□ 1.07
HDAC5-212ENST00000593013 OTUD7BQ6GQQ9 843 aa21.75■■□□□ 1.07
HDAC5-212ENST00000593013 PODNQ7Z5L7 613 aa21.75■■□□□ 1.07
HDAC5-212ENST00000593013 ESR2Q92731 530 aa21.75■■□□□ 1.07
HDAC5-212ENST00000593013 FTOQ9C0B1 505 aaKnown RBP eCLIP21.75■■□□□ 1.07
HDAC5-212ENST00000593013 DBNDD1Q9H9R9 158 aa21.75■■□□□ 1.07
HDAC5-212ENST00000593013 NR1I2O75469 434 aa21.74■■□□□ 1.07
HDAC5-212ENST00000593013 IARSP41252 1262 aaKnown RBP21.74■■□□□ 1.07
HDAC5-212ENST00000593013 SEC23AQ15436 765 aa21.74■■□□□ 1.07
HDAC5-212ENST00000593013 SYNE3Q6ZMZ3 975 aa21.74■■□□□ 1.07
HDAC5-212ENST00000593013 TNMDQ9H2S6 317 aa21.74■■□□□ 1.07
HDAC5-212ENST00000593013 ERICH2A1L162 156 aa21.73■■□□□ 1.07
HDAC5-212ENST00000593013 FMNL1O95466 1100 aaPredicted RBP21.73■■□□□ 1.07
HDAC5-212ENST00000593013 RXRAP19793 462 aa21.73■■□□□ 1.07
HDAC5-212ENST00000593013 CLCN1P35523 988 aa21.73■■□□□ 1.07
HDAC5-212ENST00000593013 RASSF7Q02833 373 aa21.73■■□□□ 1.07
HDAC5-212ENST00000593013 RRP12Q5JTH9 1297 aaKnown RBP21.73■■□□□ 1.07
HDAC5-212ENST00000593013 KIF28PB7ZC32 967 aa21.72■■□□□ 1.07
HDAC5-212ENST00000593013 ECE2O60344 883 aa21.72■■□□□ 1.07
HDAC5-212ENST00000593013 LARGE2Q8N3Y3 721 aa21.72■■□□□ 1.07
HDAC5-212ENST00000593013 WDR66Q8TBY9 1149 aa21.72■■□□□ 1.07
HDAC5-212ENST00000593013 CRNKL1Q9BZJ0 848 aaKnown RBP21.72■■□□□ 1.07
HDAC5-212ENST00000593013 ATP8A2Q9NTI2 1148 aa21.72■■□□□ 1.07
HDAC5-212ENST00000593013 FAM205AQ6ZU69 1335 aa21.72■■□□□ 1.07
HDAC5-212ENST00000593013 SBF1O95248 1867 aa21.72■■□□□ 1.07
HDAC5-212ENST00000593013 MYH6P13533 1939 aa21.72■■□□□ 1.07
HDAC5-212ENST00000593013 A0A1W2PQ27 194 aa21.72■■□□□ 1.07
HDAC5-212ENST00000593013 A0A1W2PQ64 194 aa21.72■■□□□ 1.07
HDAC5-212ENST00000593013 A0A1W2PQD8 194 aa21.72■■□□□ 1.07
HDAC5-212ENST00000593013 MINDY4BA8MYZ0 360 aa21.72■■□□□ 1.07
HDAC5-212ENST00000593013 PRDX5P30044 214 aa21.72■■□□□ 1.07
HDAC5-212ENST00000593013 CEBPZQ03701 1054 aaKnown RBP21.72■■□□□ 1.07
HDAC5-212ENST00000593013 KRT40Q6A162 431 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms