RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 B4E1Z4 1266 aa14.32□□□□□ -0.12
DNMT1-228ENST00000592705 PHKG2P15735 406 aa14.32□□□□□ -0.12
DNMT1-228ENST00000592705 MCM7P33993 719 aa14.32□□□□□ -0.12
DNMT1-228ENST00000592705 MLKLQ8NB16 471 aa14.32□□□□□ -0.12
DNMT1-228ENST00000592705 TCHPQ9BT92 498 aa14.32□□□□□ -0.12
DNMT1-228ENST00000592705 PSDA5PKW4 1024 aaPredicted RBP14.32□□□□□ -0.12
DNMT1-228ENST00000592705 JAK2O60674 1132 aa14.32□□□□□ -0.12
DNMT1-228ENST00000592705 CAPN2P17655 700 aa14.32□□□□□ -0.12
DNMT1-228ENST00000592705 DTHD1Q6ZMT9 781 aa14.32□□□□□ -0.12
DNMT1-228ENST00000592705 HDXQ7Z353 690 aa14.32□□□□□ -0.12
DNMT1-228ENST00000592705 SUPT20HL1Q3ZLR7 823 aa14.31□□□□□ -0.12
DNMT1-228ENST00000592705 CCDC91Q7Z6B0 441 aa14.31□□□□□ -0.12
DNMT1-228ENST00000592705 SYCP3Q8IZU3 236 aa14.31□□□□□ -0.12
DNMT1-228ENST00000592705 TTLL6Q8N841 843 aa14.31□□□□□ -0.12
DNMT1-228ENST00000592705 MMRN2Q9H8L6 949 aa14.31□□□□□ -0.12
DNMT1-228ENST00000592705 WDR70Q9NW82 654 aa14.31□□□□□ -0.12
DNMT1-228ENST00000592705 GOLGA6L10A0A0M3HER8 536 aa14.31□□□□□ -0.12
DNMT1-228ENST00000592705 GPAA1O43292 621 aa14.31□□□□□ -0.12
DNMT1-228ENST00000592705 GTF2IP78347 998 aa14.31□□□□□ -0.12
DNMT1-228ENST00000592705 SHROOM2Q13796 1616 aa14.31□□□□□ -0.12
DNMT1-228ENST00000592705 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.31□□□□□ -0.121e-6■□□□□ 11
DNMT1-228ENST00000592705 KIF4AO95239 1232 aa14.31□□□□□ -0.12
DNMT1-228ENST00000592705 PTH1RQ03431 593 aa14.31□□□□□ -0.12
DNMT1-228ENST00000592705 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.31□□□□□ -0.12
DNMT1-228ENST00000592705 PODXL2Q9NZ53 605 aa14.31□□□□□ -0.12
DNMT1-228ENST00000592705 PPP1R2P41236 205 aa14.31□□□□□ -0.12
DNMT1-228ENST00000592705 MAPK8IP2Q13387 824 aaPredicted RBP14.31□□□□□ -0.12
DNMT1-228ENST00000592705 IGSF22Q8N9C0 903 aa14.3□□□□□ -0.12
DNMT1-228ENST00000592705 RSPH14Q9UHP6 348 aa14.3□□□□□ -0.12
DNMT1-228ENST00000592705 TTF2Q9UNY4 1162 aaKnown RBP14.3□□□□□ -0.12
DNMT1-228ENST00000592705 GIGYF2Q6Y7W6 1299 aaKnown RBP14.3□□□□□ -0.12
DNMT1-228ENST00000592705 TBC1D5Q92609 795 aa14.3□□□□□ -0.12
DNMT1-228ENST00000592705 TSGA10Q9BZW7 698 aa14.3□□□□□ -0.12
DNMT1-228ENST00000592705 RRP36Q96EU6 259 aaKnown RBP14.3□□□□□ -0.12
DNMT1-228ENST00000592705 VPS18Q9P253 973 aa14.3□□□□□ -0.12
DNMT1-228ENST00000592705 GNA11P29992 359 aa14.3□□□□□ -0.12
DNMT1-228ENST00000592705 ERFEQ4G0M1 354 aa14.3□□□□□ -0.12
DNMT1-228ENST00000592705 BEND3Q5T5X7 828 aa14.3□□□□□ -0.12
DNMT1-228ENST00000592705 KRT79Q5XKE5 535 aa14.3□□□□□ -0.12
DNMT1-228ENST00000592705 NBPF11Q86T75 865 aa14.3□□□□□ -0.12
DNMT1-228ENST00000592705 IL17REQ8NFR9 667 aa14.3□□□□□ -0.12
DNMT1-228ENST00000592705 CTNNBL1Q8WYA6 563 aaPredicted RBP14.3□□□□□ -0.12
DNMT1-228ENST00000592705 CCDC97Q96F63 343 aaPredicted RBP14.3□□□□□ -0.12
DNMT1-228ENST00000592705 E7EWF7 191 aa14.29□□□□□ -0.12
DNMT1-228ENST00000592705 CRKLP46109 303 aaKnown RBP14.29□□□□□ -0.12
DNMT1-228ENST00000592705 GABPB1Q06547 395 aaPredicted RBP14.29□□□□□ -0.12
DNMT1-228ENST00000592705 KIAA0753Q2KHM9 967 aa14.29□□□□□ -0.12
DNMT1-228ENST00000592705 SPECC1LQ69YQ0 1117 aa14.29□□□□□ -0.12
DNMT1-228ENST00000592705 USP37Q86T82 979 aa14.29□□□□□ -0.12
DNMT1-228ENST00000592705 LMBR1Q8WVP7 490 aa14.29□□□□□ -0.12
DNMT1-228ENST00000592705 PLA2R1Q13018 1463 aa14.29□□□□□ -0.12
DNMT1-228ENST00000592705 ARHGAP6O43182 974 aa14.29□□□□□ -0.12
DNMT1-228ENST00000592705 MMP10P09238 476 aa14.29□□□□□ -0.12
DNMT1-228ENST00000592705 RHOXF2BP0C7M4 288 aa14.29□□□□□ -0.12
DNMT1-228ENST00000592705 ZNF853P0CG23 659 aa14.29□□□□□ -0.12
DNMT1-228ENST00000592705 ZYXQ15942 572 aaKnown RBP14.29□□□□□ -0.12
DNMT1-228ENST00000592705 CCDC174Q6PII3 467 aa14.29□□□□□ -0.12
DNMT1-228ENST00000592705 ZNF274Q96GC6 653 aaPredicted RBP14.29□□□□□ -0.12
DNMT1-228ENST00000592705 RHOXF2Q9BQY4 288 aa14.29□□□□□ -0.12
DNMT1-228ENST00000592705 VWA3AA6NCI4 1184 aa14.29□□□□□ -0.12
DNMT1-228ENST00000592705 NEURL1BA8MQ27 555 aa14.29□□□□□ -0.12
DNMT1-228ENST00000592705 CNGA1P29973 690 aa14.29□□□□□ -0.12
DNMT1-228ENST00000592705 NEK11Q8NG66 645 aa14.29□□□□□ -0.12
DNMT1-228ENST00000592705 LSG1Q9H089 658 aaKnown RBP14.29□□□□□ -0.12
DNMT1-228ENST00000592705 TRPM1Q7Z4N2 1603 aa14.29□□□□□ -0.12
DNMT1-228ENST00000592705 NOP56O00567 594 aaKnown RBP14.29□□□□□ -0.12
DNMT1-228ENST00000592705 CD2BP2O95400 341 aaKnown RBP14.29□□□□□ -0.12
DNMT1-228ENST00000592705 ADALQ6DHV7 355 aa14.29□□□□□ -0.12
DNMT1-228ENST00000592705 RTKN2Q8IZC4 609 aa14.29□□□□□ -0.12
DNMT1-228ENST00000592705 ZKSCAN3Q9BRR0 538 aa14.29□□□□□ -0.12
DNMT1-228ENST00000592705 TPCN1Q9ULQ1 816 aa14.29□□□□□ -0.12
DNMT1-228ENST00000592705 PPP2R5BQ15173 497 aa14.28□□□□□ -0.12
DNMT1-228ENST00000592705 DIS3L2Q8IYB7 885 aaKnown RBP14.28□□□□□ -0.12
DNMT1-228ENST00000592705 TTC16Q8NEE8 873 aa14.28□□□□□ -0.12
DNMT1-228ENST00000592705 BBXQ8WY36 941 aaPredicted RBP14.28□□□□□ -0.12
DNMT1-228ENST00000592705 BCORL1Q5H9F3 1711 aa14.28□□□□□ -0.12
DNMT1-228ENST00000592705 PRPHP41219 470 aa14.28□□□□□ -0.12
DNMT1-228ENST00000592705 EN1Q05925 392 aaPredicted RBP14.28□□□□□ -0.12
DNMT1-228ENST00000592705 TCP10Q12799 353 aa14.28□□□□□ -0.12
DNMT1-228ENST00000592705 ZNF174Q15697 407 aa14.28□□□□□ -0.12
DNMT1-228ENST00000592705 EP400NLQ6ZTU2 488 aa14.28□□□□□ -0.12
DNMT1-228ENST00000592705 CAPZA3Q96KX2 299 aa14.28□□□□□ -0.12
DNMT1-228ENST00000592705 NBPF3Q9H094 633 aa14.28□□□□□ -0.12
DNMT1-228ENST00000592705 U2AF2P26368 475 aaKnown RBP eCLIP14.28□□□□□ -0.126e-7■■■□□ 16.6
DNMT1-228ENST00000592705 PLCD1P51178 756 aa14.28□□□□□ -0.12
DNMT1-228ENST00000592705 MFSD14BQ5SR56 506 aa14.28□□□□□ -0.12
DNMT1-228ENST00000592705 KRT40Q6A162 431 aa14.28□□□□□ -0.12
DNMT1-228ENST00000592705 CTNND2Q9UQB3 1225 aa14.28□□□□□ -0.12
DNMT1-228ENST00000592705 KIF1BO60333 1816 aa14.28□□□□□ -0.12
DNMT1-228ENST00000592705 CCDC122Q5T0U0 273 aa14.28□□□□□ -0.12
DNMT1-228ENST00000592705 CYP26C1Q6V0L0 522 aa14.28□□□□□ -0.12
DNMT1-228ENST00000592705 NAPGQ99747 312 aaPredicted RBP14.28□□□□□ -0.12
DNMT1-228ENST00000592705 SAP30BPQ9UHR5 308 aaKnown RBP14.28□□□□□ -0.12
DNMT1-228ENST00000592705 A0A0D9SFI3 127 aa14.28□□□□□ -0.12
DNMT1-228ENST00000592705 M0QZ92 97 aa14.28□□□□□ -0.12
DNMT1-228ENST00000592705 PFKFB2O60825 505 aa14.28□□□□□ -0.12
DNMT1-228ENST00000592705 CUL4AQ13619 759 aa14.28□□□□□ -0.12
DNMT1-228ENST00000592705 ELF2Q15723 593 aa14.28□□□□□ -0.12
DNMT1-228ENST00000592705 POLR2DO15514 142 aaKnown RBP14.27□□□□□ -0.12
DNMT1-228ENST00000592705 GIGYF1O75420 1035 aaPredicted RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms