RNA–Protein interactions for RNA: ENST00000592326.1

USP36-223, Transcript of ubiquitin specific peptidase 36, human

TSL 5

Gene USP36, Length 406 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP36-223	ENST00000592326	PXYLP1	Q8TE99	480 aa		13.89	□□□□□ -0.19
USP36-223	ENST00000592326	CLUAP1	Q96AJ1	413 aa		13.89	□□□□□ -0.19
USP36-223	ENST00000592326	NSUN4	Q96CB9	384 aa	Known RBP	13.89	□□□□□ -0.19
USP36-223	ENST00000592326	DEFB118	Q96PH6	123 aa		13.89	□□□□□ -0.19
USP36-223	ENST00000592326	TRIM34	Q9BYJ4	488 aa		13.89	□□□□□ -0.19
USP36-223	ENST00000592326	AS3MT	Q9HBK9	375 aa		13.89	□□□□□ -0.19
USP36-223	ENST00000592326	RFX7	Q2KHR2	1363 aa		13.88	□□□□□ -0.19
USP36-223	ENST00000592326	BAG3	O95817	575 aa		13.88	□□□□□ -0.19
USP36-223	ENST00000592326	HMGCS2	P54868	508 aa		13.88	□□□□□ -0.19
USP36-223	ENST00000592326	MTX1	Q13505	466 aa		13.88	□□□□□ -0.19
USP36-223	ENST00000592326	TTC39A	Q5SRH9	613 aa		13.88	□□□□□ -0.19
USP36-223	ENST00000592326	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.88	□□□□□ -0.19
USP36-223	ENST00000592326	ZNF280C	Q8ND82	737 aa		13.88	□□□□□ -0.19
USP36-223	ENST00000592326	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.88	□□□□□ -0.19
USP36-223	ENST00000592326	USP17L5	A8MUK1	530 aa		13.87	□□□□□ -0.19
USP36-223	ENST00000592326	EVI5	O60447	810 aa		13.87	□□□□□ -0.19
USP36-223	ENST00000592326	NPM3	O75607	178 aa	Known RBP	13.87	□□□□□ -0.19
USP36-223	ENST00000592326	ARID4A	P29374	1257 aa	Predicted RBP	13.87	□□□□□ -0.19
USP36-223	ENST00000592326	CAP2	P40123	477 aa		13.87	□□□□□ -0.19
USP36-223	ENST00000592326	IRF5	Q13568	498 aa		13.87	□□□□□ -0.19
USP36-223	ENST00000592326	CCDC158	Q5M9N0	1113 aa		13.87	□□□□□ -0.19
USP36-223	ENST00000592326	NAA16	Q6N069	864 aa	Predicted RBP	13.87	□□□□□ -0.19
USP36-223	ENST00000592326	ATF7IP	Q6VMQ6	1270 aa		13.87	□□□□□ -0.19
USP36-223	ENST00000592326	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.87	□□□□□ -0.19
USP36-223	ENST00000592326	ZNF384	Q8TF68	577 aa		13.87	□□□□□ -0.19
USP36-223	ENST00000592326	TBC1D2	Q9BYX2	928 aa		13.87	□□□□□ -0.19
USP36-223	ENST00000592326	SNRK	Q9NRH2	765 aa		13.87	□□□□□ -0.19
USP36-223	ENST00000592326	RBM27	Q9P2N5	1060 aa	Known RBP	13.87	□□□□□ -0.19
USP36-223	ENST00000592326	PNMA6E	A0A0J9YXQ4	647 aa		13.86	□□□□□ -0.19
USP36-223	ENST00000592326	BCAR3	O75815	825 aa		13.86	□□□□□ -0.19
USP36-223	ENST00000592326	TRIM27	P14373	513 aa		13.86	□□□□□ -0.19
USP36-223	ENST00000592326	MCAM	P43121	646 aa		13.86	□□□□□ -0.19
USP36-223	ENST00000592326	GCLC	P48506	637 aa	Predicted RBP	13.86	□□□□□ -0.19
USP36-223	ENST00000592326	FAM110C	Q1W6H9	321 aa		13.86	□□□□□ -0.19
USP36-223	ENST00000592326	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.86	□□□□□ -0.19
USP36-223	ENST00000592326	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
USP36-223	ENST00000592326	TMOD4	Q9NZQ9	345 aa		13.86	□□□□□ -0.19
USP36-223	ENST00000592326	PI4KB	Q9UBF8	816 aa		13.86	□□□□□ -0.19
USP36-223	ENST00000592326	TNN	Q9UQP3	1299 aa		13.86	□□□□□ -0.19
USP36-223	ENST00000592326	MYH2	Q9UKX2	1941 aa		13.86	□□□□□ -0.19
USP36-223	ENST00000592326	DOCK2	Q92608	1830 aa		13.85	□□□□□ -0.19
USP36-223	ENST00000592326	KIAA0100	Q14667	2235 aa	Known RBP	13.85	□□□□□ -0.19
USP36-223	ENST00000592326	PLCG2	P16885	1265 aa		13.85	□□□□□ -0.19
USP36-223	ENST00000592326	IRX3	P78415	501 aa	Predicted RBP	13.85	□□□□□ -0.19
USP36-223	ENST00000592326	MAPKAPK5	Q8IW41	473 aa		13.85	□□□□□ -0.19
USP36-223	ENST00000592326	TGFBRAP1	Q8WUH2	860 aa		13.85	□□□□□ -0.19
USP36-223	ENST00000592326	DHX36	Q9H2U1	1008 aa	Known RBP	13.85	□□□□□ -0.19
USP36-223	ENST00000592326	HERC5	Q9UII4	1024 aa	Known RBP	13.85	□□□□□ -0.19
USP36-223	ENST00000592326	ZBTB7B	O15156	539 aa	Predicted RBP	13.84	□□□□□ -0.19
USP36-223	ENST00000592326	SURF6	O75683	361 aa	Known RBP	13.84	□□□□□ -0.19
USP36-223	ENST00000592326	CAPN2	P17655	700 aa		13.84	□□□□□ -0.19
USP36-223	ENST00000592326	UBE2Q1	Q7Z7E8	422 aa		13.84	□□□□□ -0.19
USP36-223	ENST00000592326	CCAR1	Q8IX12	1150 aa	Known RBP	13.84	□□□□□ -0.19
USP36-223	ENST00000592326	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.84	□□□□□ -0.19
USP36-223	ENST00000592326	MTMR2	Q13614	643 aa		13.83	□□□□□ -0.2
USP36-223	ENST00000592326	RRP1B	Q14684	758 aa	Known RBP	13.83	□□□□□ -0.2
USP36-223	ENST00000592326	TNNI3K	Q59H18	835 aa		13.83	□□□□□ -0.2
USP36-223	ENST00000592326	ZKSCAN2	Q63HK3	967 aa		13.83	□□□□□ -0.2
USP36-223	ENST00000592326	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.83	□□□□□ -0.2
USP36-223	ENST00000592326	TMEM57	Q8N5G2	664 aa		13.83	□□□□□ -0.2
USP36-223	ENST00000592326	PAWR	Q96IZ0	340 aa	Known RBP	13.83	□□□□□ -0.2
USP36-223	ENST00000592326	DBNDD2	Q9BQY9	259 aa		13.83	□□□□□ -0.2
USP36-223	ENST00000592326	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
USP36-223	ENST00000592326	FPGT-TNNI3K	V9GXZ4	949 aa		13.83	□□□□□ -0.2
USP36-223	ENST00000592326	HMGCR	P04035	888 aa		13.82	□□□□□ -0.2
USP36-223	ENST00000592326	HLA-DOA	P06340	250 aa		13.82	□□□□□ -0.2
USP36-223	ENST00000592326	ASNS	P08243	561 aa		13.82	□□□□□ -0.2
USP36-223	ENST00000592326	CYP2B6	P20813	491 aa		13.82	□□□□□ -0.2
USP36-223	ENST00000592326	SH3D19	Q5HYK7	790 aa		13.82	□□□□□ -0.2
USP36-223	ENST00000592326	NECAB2	Q7Z6G3	386 aa		13.82	□□□□□ -0.2
USP36-223	ENST00000592326	CWC22	Q9HCG8	908 aa	Known RBP	13.82	□□□□□ -0.2
USP36-223	ENST00000592326	HMX1	Q9NP08	348 aa	Predicted RBP	13.82	□□□□□ -0.2
USP36-223	ENST00000592326	PAK6	Q9NQU5	681 aa	Predicted RBP	13.82	□□□□□ -0.2
USP36-223	ENST00000592326	SAP30BP	Q9UHR5	308 aa	Known RBP	13.82	□□□□□ -0.2
USP36-223	ENST00000592326	PALD1	Q9ULE6	856 aa		13.82	□□□□□ -0.2
USP36-223	ENST00000592326	DOCK1	Q14185	1865 aa		13.82	□□□□□ -0.2
USP36-223	ENST00000592326	GDF11	O95390	407 aa		13.81	□□□□□ -0.2
USP36-223	ENST00000592326	CENPB	P07199	599 aa	Predicted RBP	13.81	□□□□□ -0.2
USP36-223	ENST00000592326	BACE1	P56817	501 aa		13.81	□□□□□ -0.2
USP36-223	ENST00000592326	ATP8B2	P98198	1209 aa		13.81	□□□□□ -0.2
USP36-223	ENST00000592326	FTSJ3	Q8IY81	847 aa	Known RBP	13.81	□□□□□ -0.2
USP36-223	ENST00000592326	GPRC5A	Q8NFJ5	357 aa		13.81	□□□□□ -0.2
USP36-223	ENST00000592326	WDR18	Q9BV38	432 aa		13.81	□□□□□ -0.2
USP36-223	ENST00000592326	C1orf115	Q9H7X2	142 aa		13.81	□□□□□ -0.2
USP36-223	ENST00000592326	GPR108	Q9NPR9	543 aa		13.81	□□□□□ -0.2
USP36-223	ENST00000592326	COL2A1	P02458	1487 aa	Predicted RBP	13.8	□□□□□ -0.2
USP36-223	ENST00000592326	C19orf81	C9J6K1	198 aa		13.8	□□□□□ -0.2
USP36-223	ENST00000592326	USP17L10	C9JJH3	530 aa		13.8	□□□□□ -0.2
USP36-223	ENST00000592326	CYP2E1	P05181	493 aa	Predicted RBP	13.8	□□□□□ -0.2
USP36-223	ENST00000592326	CYP7A1	P22680	504 aa		13.8	□□□□□ -0.2
USP36-223	ENST00000592326	ZAP70	P43403	619 aa		13.8	□□□□□ -0.2
USP36-223	ENST00000592326	USP5	P45974	858 aa		13.8	□□□□□ -0.2
USP36-223	ENST00000592326	PPP4C	P60510	307 aa		13.8	□□□□□ -0.2
USP36-223	ENST00000592326	PDE3A	Q14432	1141 aa		13.8	□□□□□ -0.2
USP36-223	ENST00000592326	ADGRA1	Q86SQ6	560 aa		13.8	□□□□□ -0.2
USP36-223	ENST00000592326	DIS3L	Q8TF46	1054 aa	Known RBP	13.8	□□□□□ -0.2
USP36-223	ENST00000592326	P2RX7	Q99572	595 aa	Known RBP	13.8	□□□□□ -0.2
USP36-223	ENST00000592326	NUDT12	Q9BQG2	462 aa		13.8	□□□□□ -0.2
USP36-223	ENST00000592326	CRISPLD2	Q9H0B8	497 aa		13.8	□□□□□ -0.2
USP36-223	ENST00000592326	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms