RNA–Protein interactions for RNA: ENST00000592202.5

RBM42-206, Transcript of RNA binding motif protein 42, human

TSL 5 BASIC

Gene RBM42, Length 1,469 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM42-206	ENST00000592202	UBE3C	Q15386	1083 aa		27.9	■■■□□ 2.06
RBM42-206	ENST00000592202	SLFNL1	Q499Z3	407 aa		27.9	■■■□□ 2.06
RBM42-206	ENST00000592202	OTUD7B	Q6GQQ9	843 aa		27.9	■■■□□ 2.06
RBM42-206	ENST00000592202	FOXP4	Q8IVH2	680 aa	Predicted RBP	27.9	■■■□□ 2.06
RBM42-206	ENST00000592202	PTPN18	Q99952	460 aa		27.9	■■■□□ 2.06
RBM42-206	ENST00000592202	SAP30BP	Q9UHR5	308 aa	Known RBP	27.9	■■■□□ 2.06
RBM42-206	ENST00000592202	MYH1	P12882	1939 aa		27.9	■■■□□ 2.06
RBM42-206	ENST00000592202	PI4K2B	Q8TCG2	481 aa		27.89	■■■□□ 2.06
RBM42-206	ENST00000592202	CFHR5	Q9BXR6	569 aa		27.89	■■■□□ 2.06
RBM42-206	ENST00000592202	SALL3	Q9BXA9	1300 aa		27.89	■■■□□ 2.06
RBM42-206	ENST00000592202	CCL15-CCL14	A0A0B4J2E2	113 aa		27.89	■■■□□ 2.05
RBM42-206	ENST00000592202	GLRX3	O76003	335 aa	Known RBP	27.89	■■■□□ 2.05
RBM42-206	ENST00000592202	CHGB	P05060	677 aa		27.89	■■■□□ 2.05
RBM42-206	ENST00000592202	CCL15	Q16663	113 aa		27.89	■■■□□ 2.05
RBM42-206	ENST00000592202	KBTBD3	Q8NAB2	608 aa		27.89	■■■□□ 2.05
RBM42-206	ENST00000592202	BRI3BP	Q8WY22	251 aa		27.89	■■■□□ 2.05
RBM42-206	ENST00000592202	CRNKL1	Q9BZJ0	848 aa	Known RBP	27.89	■■■□□ 2.05
RBM42-206	ENST00000592202	PICK1	Q9NRD5	415 aa		27.89	■■■□□ 2.05
RBM42-206	ENST00000592202	HLA-DOA	P06340	250 aa		27.88	■■■□□ 2.05
RBM42-206	ENST00000592202	CETP	P11597	493 aa		27.88	■■■□□ 2.05
RBM42-206	ENST00000592202	SNAPC2	Q13487	334 aa		27.88	■■■□□ 2.05
RBM42-206	ENST00000592202	TNS4	Q8IZW8	715 aa		27.88	■■■□□ 2.05
RBM42-206	ENST00000592202	LCORL	Q8N3X6	602 aa		27.88	■■■□□ 2.05
RBM42-206	ENST00000592202	SIPA1L1	O43166	1804 aa		27.87	■■■□□ 2.05
RBM42-206	ENST00000592202	PTPRA	P18433	802 aa		27.87	■■■□□ 2.05
RBM42-206	ENST00000592202	METTL16	Q86W50	562 aa	Known RBP	27.87	■■■□□ 2.05
RBM42-206	ENST00000592202	B4GALNT3	Q6L9W6	998 aa		27.86	■■■□□ 2.05
RBM42-206	ENST00000592202	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	27.86	■■■□□ 2.05
RBM42-206	ENST00000592202	ARMT1	Q9H993	441 aa		27.86	■■■□□ 2.05
RBM42-206	ENST00000592202	KCNH4	Q9UQ05	1017 aa		27.86	■■■□□ 2.05
RBM42-206	ENST00000592202	ZHX2	Q9Y6X8	837 aa		27.86	■■■□□ 2.05
RBM42-206	ENST00000592202	SLC4A8	Q2Y0W8	1093 aa		27.85	■■■□□ 2.05
RBM42-206	ENST00000592202	R3HDML	Q9H3Y0	253 aa		27.85	■■■□□ 2.05
RBM42-206	ENST00000592202	DOCK1	Q14185	1865 aa		27.85	■■■□□ 2.05
RBM42-206	ENST00000592202	MBD4	O95243	580 aa		27.84	■■■□□ 2.05
RBM42-206	ENST00000592202	CAP2	P40123	477 aa		27.84	■■■□□ 2.05
RBM42-206	ENST00000592202	TTC6	Q86TZ1	520 aa		27.84	■■■□□ 2.05
RBM42-206	ENST00000592202	TRIM34	Q9BYJ4	488 aa		27.84	■■■□□ 2.05
RBM42-206	ENST00000592202	LNPK	Q9C0E8	428 aa		27.84	■■■□□ 2.05
RBM42-206	ENST00000592202	STAP2	Q9UGK3	403 aa		27.84	■■■□□ 2.05
RBM42-206	ENST00000592202	CXCL11	O14625	94 aa		27.83	■■■□□ 2.05
RBM42-206	ENST00000592202	RRP1B	Q14684	758 aa	Known RBP	27.83	■■■□□ 2.05
RBM42-206	ENST00000592202	NOM1	Q5C9Z4	860 aa	Known RBP	27.83	■■■□□ 2.05
RBM42-206	ENST00000592202	SDR42E1	Q8WUS8	393 aa		27.83	■■■□□ 2.05
RBM42-206	ENST00000592202	PUS7L	Q9H0K6	701 aa	Known RBP	27.83	■■■□□ 2.05
RBM42-206	ENST00000592202	DNAJC18	Q9H819	358 aa		27.83	■■■□□ 2.05
RBM42-206	ENST00000592202	GPR25	O00155	361 aa		27.83	■■■□□ 2.04
RBM42-206	ENST00000592202	PDE1A	P54750	535 aa		27.83	■■■□□ 2.04
RBM42-206	ENST00000592202	FAM43A	Q8N2R8	423 aa		27.83	■■■□□ 2.04
RBM42-206	ENST00000592202	AFG3L2	Q9Y4W6	797 aa		27.83	■■■□□ 2.04
RBM42-206	ENST00000592202	RNF113A	O15541	343 aa	Known RBP	27.82	■■■□□ 2.04
RBM42-206	ENST00000592202	DCP1A	Q9NPI6	582 aa	Predicted RBP	27.82	■■■□□ 2.04
RBM42-206	ENST00000592202	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	27.82	■■■□□ 2.04
RBM42-206	ENST00000592202	PRKAB2	O43741	272 aa		27.81	■■■□□ 2.04
RBM42-206	ENST00000592202	POLR3D	P05423	398 aa	Predicted RBP	27.81	■■■□□ 2.04
RBM42-206	ENST00000592202	ZFY	P08048	801 aa	Predicted RBP	27.81	■■■□□ 2.04
RBM42-206	ENST00000592202	PLCD1	P51178	756 aa		27.81	■■■□□ 2.04
RBM42-206	ENST00000592202	NUCB1	Q02818	461 aa		27.81	■■■□□ 2.04
RBM42-206	ENST00000592202	LRRFIP1	Q32MZ4	808 aa	Known RBP	27.81	■■■□□ 2.04
RBM42-206	ENST00000592202	CHD1L	Q86WJ1	897 aa		27.81	■■■□□ 2.04
RBM42-206	ENST00000592202	ZNF296	Q8WUU4	475 aa	Predicted RBP	27.81	■■■□□ 2.04
RBM42-206	ENST00000592202	EHD4	Q9H223	541 aa		27.81	■■■□□ 2.04
RBM42-206	ENST00000592202	MCM9	Q9NXL9	1143 aa		27.81	■■■□□ 2.04
RBM42-206	ENST00000592202	SERPINB13	Q9UIV8	391 aa		27.81	■■■□□ 2.04
RBM42-206	ENST00000592202	ATAD5	Q96QE3	1844 aa		27.8	■■■□□ 2.04
RBM42-206	ENST00000592202	BTBD19	C9JJ37	291 aa		27.8	■■■□□ 2.04
RBM42-206	ENST00000592202	CRHR2	Q13324	411 aa		27.8	■■■□□ 2.04
RBM42-206	ENST00000592202	ATP8A2	Q9NTI2	1148 aa		27.8	■■■□□ 2.04
RBM42-206	ENST00000592202	PHIP	Q8WWQ0	1821 aa		27.8	■■■□□ 2.04
RBM42-206	ENST00000592202	NAV1	Q8NEY1	1877 aa		27.79	■■■□□ 2.04
RBM42-206	ENST00000592202	CCDC84	Q86UT8	332 aa	Predicted RBP	27.79	■■■□□ 2.04
RBM42-206	ENST00000592202	APPBP2	Q92624	585 aa		27.79	■■■□□ 2.04
RBM42-206	ENST00000592202	TAF1C	Q15572	869 aa	Predicted RBP	27.78	■■■□□ 2.04
RBM42-206	ENST00000592202	OSBP2	Q969R2	916 aa		27.78	■■■□□ 2.04
RBM42-206	ENST00000592202	ZCCHC17	Q9NP64	241 aa	Known RBP	27.78	■■■□□ 2.04
RBM42-206	ENST00000592202	MOGS	Q13724	837 aa		27.77	■■■□□ 2.04
RBM42-206	ENST00000592202	DDX60L	Q5H9U9	1706 aa	Known RBP	27.77	■■■□□ 2.04
RBM42-206	ENST00000592202	FSD1	Q9BTV5	496 aa		27.77	■■■□□ 2.04
RBM42-206	ENST00000592202	ZFYVE28	Q9HCC9	887 aa		27.77	■■■□□ 2.04
RBM42-206	ENST00000592202	SLC4A4	Q9Y6R1	1079 aa		27.77	■■■□□ 2.04
RBM42-206	ENST00000592202	USP17L5	A8MUK1	530 aa		27.76	■■■□□ 2.04
RBM42-206	ENST00000592202	FKTN	O75072	461 aa		27.76	■■■□□ 2.04
RBM42-206	ENST00000592202	ASNS	P08243	561 aa		27.76	■■■□□ 2.04
RBM42-206	ENST00000592202	TATDN1	Q6P1N9	297 aa		27.76	■■■□□ 2.04
RBM42-206	ENST00000592202	ANKRD23	Q86SG2	305 aa		27.76	■■■□□ 2.04
RBM42-206	ENST00000592202	STRBP	Q96SI9	672 aa	Known RBP	27.76	■■■□□ 2.04
RBM42-206	ENST00000592202	TBC1D2	Q9BYX2	928 aa		27.76	■■■□□ 2.04
RBM42-206	ENST00000592202		A0A0G2JLL6	359 aa	Predicted RBP	27.76	■■■□□ 2.03
RBM42-206	ENST00000592202	TRIM75P	A6NK02	468 aa		27.76	■■■□□ 2.03
RBM42-206	ENST00000592202	JAG1	P78504	1218 aa		27.76	■■■□□ 2.03
RBM42-206	ENST00000592202	FASTKD5	Q7L8L6	764 aa	Known RBP	27.76	■■■□□ 2.03
RBM42-206	ENST00000592202	PRRT2	Q7Z6L0	340 aa	Predicted RBP	27.76	■■■□□ 2.03
RBM42-206	ENST00000592202	GINM1	Q9NU53	330 aa		27.76	■■■□□ 2.03
RBM42-206	ENST00000592202	BAZ2A	Q9UIF9	1905 aa	Known RBP	27.75	■■■□□ 2.03
RBM42-206	ENST00000592202	GDF11	O95390	407 aa		27.75	■■■□□ 2.03
RBM42-206	ENST00000592202	EVI5L	Q96CN4	794 aa		27.75	■■■□□ 2.03
RBM42-206	ENST00000592202	DDRGK1	Q96HY6	314 aa		27.75	■■■□□ 2.03
RBM42-206	ENST00000592202	PTPRF	P10586	1907 aa		27.74	■■■□□ 2.03
RBM42-206	ENST00000592202	GABPA	Q06546	454 aa		27.74	■■■□□ 2.03
RBM42-206	ENST00000592202	SPP2	Q13103	211 aa		27.74	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms