RNA–Protein interactions for RNA: ENST00000592054.5

DNMT1-226, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-226ENST00000592054 VTI1AQ96AJ9 217 aa5.18□□□□□ -1.58
DNMT1-226ENST00000592054 CXXC1Q9P0U4 656 aaPredicted RBP5.18□□□□□ -1.58
DNMT1-226ENST00000592054 CD2APQ9Y5K6 639 aa5.18□□□□□ -1.58
DNMT1-226ENST00000592054 LRRC37A3O60309 1634 aa5.18□□□□□ -1.58
DNMT1-226ENST00000592054 TUBGCP6Q96RT7 1819 aa5.18□□□□□ -1.58
DNMT1-226ENST00000592054 SSH2Q76I76 1423 aa5.17□□□□□ -1.58
DNMT1-226ENST00000592054 DHX15O43143 795 aaKnown RBP5.17□□□□□ -1.58
DNMT1-226ENST00000592054 INPP5BP32019 993 aa5.17□□□□□ -1.58
DNMT1-226ENST00000592054 DDB1Q16531 1140 aa5.17□□□□□ -1.58
DNMT1-226ENST00000592054 C11orf91Q3C1V1 193 aa5.17□□□□□ -1.58
DNMT1-226ENST00000592054 INTS5Q6P9B9 1019 aaKnown RBP5.17□□□□□ -1.58
DNMT1-226ENST00000592054 DCAF11Q8TEB1 546 aa5.17□□□□□ -1.58
DNMT1-226ENST00000592054 CLP1Q92989 425 aaKnown RBP5.17□□□□□ -1.58
DNMT1-226ENST00000592054 IFT43Q96FT9 208 aa5.17□□□□□ -1.58
DNMT1-226ENST00000592054 SEPT3Q9UH03 358 aa5.17□□□□□ -1.58
DNMT1-226ENST00000592054 THRAP3Q9Y2W1 955 aaKnown RBP5.17□□□□□ -1.58
DNMT1-226ENST00000592054 PKD1L3Q7Z443 1732 aa5.17□□□□□ -1.58
DNMT1-226ENST00000592054 IFT172Q9UG01 1749 aa5.17□□□□□ -1.58
DNMT1-226ENST00000592054 CRYBG1Q9Y4K1 1723 aa5.17□□□□□ -1.58
DNMT1-226ENST00000592054 PLEKHG2Q9H7P9 1386 aa5.16□□□□□ -1.58
DNMT1-226ENST00000592054 CICQ96RK0 1608 aaPredicted RBP5.16□□□□□ -1.58
DNMT1-226ENST00000592054 PIK3C2AO00443 1686 aa5.16□□□□□ -1.58
DNMT1-226ENST00000592054 ALS2Q96Q42 1657 aa5.16□□□□□ -1.58
DNMT1-226ENST00000592054 TMEM88BA6NKF7 163 aa5.16□□□□□ -1.58
DNMT1-226ENST00000592054 J3QW42 95 aa5.16□□□□□ -1.58
DNMT1-226ENST00000592054 OPLAHO14841 1288 aa5.16□□□□□ -1.58
DNMT1-226ENST00000592054 ADAMTS4O75173 837 aa5.16□□□□□ -1.58
DNMT1-226ENST00000592054 MICAL2O94851 1124 aa5.16□□□□□ -1.58
DNMT1-226ENST00000592054 WNT11O96014 354 aa5.16□□□□□ -1.58
DNMT1-226ENST00000592054 CHRNA2Q15822 529 aa5.16□□□□□ -1.58
DNMT1-226ENST00000592054 ZNF827Q17R98 1081 aa5.16□□□□□ -1.58
DNMT1-226ENST00000592054 ETFBKMTQ8IXQ9 262 aa5.16□□□□□ -1.58
DNMT1-226ENST00000592054 PLD4Q96BZ4 506 aa5.16□□□□□ -1.58
DNMT1-226ENST00000592054 MYO19Q96H55 970 aa5.16□□□□□ -1.58
DNMT1-226ENST00000592054 TFCP2L1Q9NZI6 479 aa5.16□□□□□ -1.58
DNMT1-226ENST00000592054 IGSF1Q8N6C5 1336 aa5.16□□□□□ -1.58
DNMT1-226ENST00000592054 PITPNM2Q9BZ72 1349 aa5.16□□□□□ -1.58
DNMT1-226ENST00000592054 KIAA0232Q92628 1395 aa5.16□□□□□ -1.58
DNMT1-226ENST00000592054 C10orf71Q711Q0 1435 aa5.15□□□□□ -1.58
DNMT1-226ENST00000592054 E9PCH4 1651 aa5.15□□□□□ -1.58
DNMT1-226ENST00000592054 PXDNLA1KZ92 1463 aa5.15□□□□□ -1.58
DNMT1-226ENST00000592054 NRXN1Q9ULB1 1477 aa5.15□□□□□ -1.58
DNMT1-226ENST00000592054 TRPM3Q9HCF6 1732 aaPredicted RBP5.15□□□□□ -1.58
DNMT1-226ENST00000592054 KCPQ6ZWJ8 1503 aa5.15□□□□□ -1.58
DNMT1-226ENST00000592054 TNFRSF10BO14763 440 aa5.15□□□□□ -1.59
DNMT1-226ENST00000592054 GHRHP01286 108 aa5.15□□□□□ -1.59
DNMT1-226ENST00000592054 ATP2B4P23634 1241 aa5.15□□□□□ -1.59
DNMT1-226ENST00000592054 ARSDP51689 593 aa5.15□□□□□ -1.59
DNMT1-226ENST00000592054 NRLP54845 237 aa5.15□□□□□ -1.59
DNMT1-226ENST00000592054 NFIAQ12857 509 aa5.15□□□□□ -1.59
DNMT1-226ENST00000592054 TREML1Q86YW5 311 aa5.15□□□□□ -1.59
DNMT1-226ENST00000592054 ZDHHC13Q8IUH4 622 aa5.15□□□□□ -1.59
DNMT1-226ENST00000592054 UBL7Q96S82 380 aaPredicted RBP5.15□□□□□ -1.59
DNMT1-226ENST00000592054 RBSNQ9H1K0 784 aa5.15□□□□□ -1.59
DNMT1-226ENST00000592054 CLTCL1P53675 1640 aa5.15□□□□□ -1.59
DNMT1-226ENST00000592054 MYOM3Q5VTT5 1437 aa5.14□□□□□ -1.59
DNMT1-226ENST00000592054 VIRMAQ69YN4 1812 aaKnown RBP5.14□□□□□ -1.59
DNMT1-226ENST00000592054 WNK3Q9BYP7 1800 aa5.14□□□□□ -1.59
DNMT1-226ENST00000592054 ZBTB39O15060 712 aa5.14□□□□□ -1.59
DNMT1-226ENST00000592054 SPINK2P20155 84 aa5.14□□□□□ -1.59
DNMT1-226ENST00000592054 SETDB1Q15047 1291 aa5.14□□□□□ -1.59
DNMT1-226ENST00000592054 C16orf46Q6P387 395 aa5.14□□□□□ -1.59
DNMT1-226ENST00000592054 Q6ZS46 218 aa5.14□□□□□ -1.59
DNMT1-226ENST00000592054 MAP4K3Q8IVH8 894 aa5.14□□□□□ -1.59
DNMT1-226ENST00000592054 SLC17A8Q8NDX2 589 aa5.14□□□□□ -1.59
DNMT1-226ENST00000592054 UTP4Q969X6 686 aaKnown RBP5.14□□□□□ -1.59
DNMT1-226ENST00000592054 NSUN5Q96P11 429 aaKnown RBP5.14□□□□□ -1.59
DNMT1-226ENST00000592054 SRA1Q9HD15 236 aaKnown RBP5.14□□□□□ -1.59
DNMT1-226ENST00000592054 PHRF1Q9P1Y6 1649 aaKnown RBP5.14□□□□□ -1.59
DNMT1-226ENST00000592054 PNPLA7Q6ZV29 1317 aa5.14□□□□□ -1.59
DNMT1-226ENST00000592054 NHSQ6T4R5 1651 aa5.14□□□□□ -1.59
DNMT1-226ENST00000592054 BRD4O60885 1362 aaPredicted RBP5.14□□□□□ -1.59
DNMT1-226ENST00000592054 BTAF1O14981 1849 aa5.13□□□□□ -1.59
DNMT1-226ENST00000592054 LOC102724428A0A0B4J2F2 783 aa5.13□□□□□ -1.59
DNMT1-226ENST00000592054 PSAPP07602 524 aa5.13□□□□□ -1.59
DNMT1-226ENST00000592054 HSPA8P11142 646 aaKnown RBP5.13□□□□□ -1.59
DNMT1-226ENST00000592054 SIK1P57059 783 aa5.13□□□□□ -1.59
DNMT1-226ENST00000592054 ZC3H6P61129 1189 aaKnown RBP5.13□□□□□ -1.59
DNMT1-226ENST00000592054 ACAD11Q709F0 780 aa5.13□□□□□ -1.59
DNMT1-226ENST00000592054 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.13□□□□□ -1.59
DNMT1-226ENST00000592054 TRIM42Q8IWZ5 723 aa5.13□□□□□ -1.59
DNMT1-226ENST00000592054 RGL4Q8IZJ4 473 aa5.13□□□□□ -1.59
DNMT1-226ENST00000592054 HIRIP3Q9BW71 556 aaPredicted RBP5.13□□□□□ -1.59
DNMT1-226ENST00000592054 CEP41Q9BYV8 373 aa5.13□□□□□ -1.59
DNMT1-226ENST00000592054 C7orf69Q9H7B7 122 aa5.13□□□□□ -1.59
DNMT1-226ENST00000592054 TLR7Q9NYK1 1049 aaKnown RBP5.13□□□□□ -1.59
DNMT1-226ENST00000592054 RTCBQ9Y3I0 505 aaKnown RBP5.13□□□□□ -1.59
DNMT1-226ENST00000592054 GPRASP1Q5JY77 1395 aa5.13□□□□□ -1.59
DNMT1-226ENST00000592054 HMX2A2RU54 273 aa5.12□□□□□ -1.59
DNMT1-226ENST00000592054 HABP4Q5JVS0 413 aaKnown RBP5.12□□□□□ -1.59
DNMT1-226ENST00000592054 PHLDB3Q6NSJ2 640 aa5.12□□□□□ -1.59
DNMT1-226ENST00000592054 ARHGAP27Q6ZUM4 889 aa5.12□□□□□ -1.59
DNMT1-226ENST00000592054 DTX1Q86Y01 620 aa5.12□□□□□ -1.59
DNMT1-226ENST00000592054 CMTR1Q8N1G2 835 aaKnown RBP5.12□□□□□ -1.59
DNMT1-226ENST00000592054 ARMC10Q8N2F6 343 aa5.12□□□□□ -1.59
DNMT1-226ENST00000592054 ANKRD30BQ9BXX2 1392 aa5.12□□□□□ -1.59
DNMT1-226ENST00000592054 ANKRD30AQ9BXX3 1397 aa5.12□□□□□ -1.59
DNMT1-226ENST00000592054 BCL9O00512 1426 aa5.12□□□□□ -1.59
DNMT1-226ENST00000592054 TRPM1Q7Z4N2 1603 aa5.12□□□□□ -1.59
DNMT1-226ENST00000592054 KIF1BO60333 1816 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms