RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 ERO1AQ96HE7 468 aa18.46■□□□□ 0.55
ERCC1-213ENST00000592023 BOLA2Q9H3K6 86 aa18.46■□□□□ 0.55
ERCC1-213ENST00000592023 MYH1P12882 1939 aa18.46■□□□□ 0.55
ERCC1-213ENST00000592023 PDE6AP16499 860 aa18.45■□□□□ 0.54
ERCC1-213ENST00000592023 SP3Q02447 781 aa18.45■□□□□ 0.54
ERCC1-213ENST00000592023 PKN2Q16513 984 aaKnown RBP18.45■□□□□ 0.54
ERCC1-213ENST00000592023 CRBNQ96SW2 442 aa18.45■□□□□ 0.54
ERCC1-213ENST00000592023 DHX36Q9H2U1 1008 aaKnown RBP18.45■□□□□ 0.54
ERCC1-213ENST00000592023 ZCCHC17Q9NP64 241 aaKnown RBP18.45■□□□□ 0.54
ERCC1-213ENST00000592023 PAG1Q9NWQ8 432 aa18.45■□□□□ 0.54
ERCC1-213ENST00000592023 HERC5Q9UII4 1024 aaKnown RBP18.45■□□□□ 0.54
ERCC1-213ENST00000592023 PALD1Q9ULE6 856 aa18.45■□□□□ 0.54
ERCC1-213ENST00000592023 TRIM17Q9Y577 477 aa18.45■□□□□ 0.54
ERCC1-213ENST00000592023 ZSWIM8A7E2V4 1837 aa18.44■□□□□ 0.54
ERCC1-213ENST00000592023 ATP5JP18859 108 aa18.44■□□□□ 0.54
ERCC1-213ENST00000592023 USP5P45974 858 aa18.44■□□□□ 0.54
ERCC1-213ENST00000592023 MOGSQ13724 837 aa18.44■□□□□ 0.54
ERCC1-213ENST00000592023 SLC9C2Q5TAH2 1124 aa18.44■□□□□ 0.54
ERCC1-213ENST00000592023 ANKRD23Q86SG2 305 aa18.44■□□□□ 0.54
ERCC1-213ENST00000592023 CERS3Q8IU89 383 aa18.44■□□□□ 0.54
ERCC1-213ENST00000592023 TRIM34Q9BYJ4 488 aa18.44■□□□□ 0.54
ERCC1-213ENST00000592023 DCTPP1Q9H773 170 aa18.44■□□□□ 0.54
ERCC1-213ENST00000592023 PI4KBQ9UBF8 816 aa18.44■□□□□ 0.54
ERCC1-213ENST00000592023 HPS5Q9UPZ3 1129 aa18.44■□□□□ 0.54
ERCC1-213ENST00000592023 PCDHB15Q9Y5E8 787 aa18.44■□□□□ 0.54
ERCC1-213ENST00000592023 ZNF532Q9HCE3 1301 aa18.44■□□□□ 0.54
ERCC1-213ENST00000592023 MYH7P12883 1935 aa18.43■□□□□ 0.54
ERCC1-213ENST00000592023 TRIM75PA6NK02 468 aa18.43■□□□□ 0.54
ERCC1-213ENST00000592023 PDHXO00330 501 aa18.43■□□□□ 0.54
ERCC1-213ENST00000592023 CXCL11O14625 94 aa18.43■□□□□ 0.54
ERCC1-213ENST00000592023 HLA-DOAP06340 250 aa18.43■□□□□ 0.54
ERCC1-213ENST00000592023 RRP1BQ14684 758 aaKnown RBP18.43■□□□□ 0.54
ERCC1-213ENST00000592023 FBXO46Q6PJ61 603 aaPredicted RBP18.43■□□□□ 0.54
ERCC1-213ENST00000592023 TMED8Q6PL24 325 aaPredicted RBP18.43■□□□□ 0.54
ERCC1-213ENST00000592023 GADL1Q6ZQY3 521 aa18.43■□□□□ 0.54
ERCC1-213ENST00000592023 OTOP1Q7RTM1 612 aa18.43■□□□□ 0.54
ERCC1-213ENST00000592023 CRACR2BQ8N4Y2 399 aaPredicted RBP18.43■□□□□ 0.54
ERCC1-213ENST00000592023 RIOK1Q9BRS2 568 aaKnown RBP18.43■□□□□ 0.54
ERCC1-213ENST00000592023 DNAJC18Q9H819 358 aa18.43■□□□□ 0.54
ERCC1-213ENST00000592023 AFG3L2Q9Y4W6 797 aa18.43■□□□□ 0.54
ERCC1-213ENST00000592023 A0A0G2JLL6 359 aaPredicted RBP18.42■□□□□ 0.54
ERCC1-213ENST00000592023 MAGEB6P1A0A0J9YX57 407 aa18.42■□□□□ 0.54
ERCC1-213ENST00000592023 TLR2O60603 784 aa18.42■□□□□ 0.54
ERCC1-213ENST00000592023 CAP2P40123 477 aa18.42■□□□□ 0.54
ERCC1-213ENST00000592023 PRRT2Q7Z6L0 340 aaPredicted RBP18.42■□□□□ 0.54
ERCC1-213ENST00000592023 HAUS7Q99871 368 aa18.42■□□□□ 0.54
ERCC1-213ENST00000592023 LOC285556D6RIA3 1793 aa18.42■□□□□ 0.54
ERCC1-213ENST00000592023 CAP1Q01518 475 aa18.41■□□□□ 0.54
ERCC1-213ENST00000592023 GPAT2Q6NUI2 795 aa18.41■□□□□ 0.54
ERCC1-213ENST00000592023 TCRBV5S4A2TA0A5A2 114 aa18.4■□□□□ 0.54
ERCC1-213ENST00000592023 SOX10P56693 466 aa18.4■□□□□ 0.54
ERCC1-213ENST00000592023 SLFNL1Q499Z3 407 aa18.4■□□□□ 0.54
ERCC1-213ENST00000592023 TSHZ3Q63HK5 1081 aa18.4■□□□□ 0.54
ERCC1-213ENST00000592023 FASTKD5Q7L8L6 764 aaKnown RBP18.4■□□□□ 0.54
ERCC1-213ENST00000592023 LCORLQ8N3X6 602 aa18.4■□□□□ 0.54
ERCC1-213ENST00000592023 PARK7Q99497 189 aaKnown RBP18.4■□□□□ 0.54
ERCC1-213ENST00000592023 EFCC1Q9HA90 598 aa18.4■□□□□ 0.54
ERCC1-213ENST00000592023 ECHDC1Q9NTX5 307 aa18.4■□□□□ 0.54
ERCC1-213ENST00000592023 CPA4Q9UI42 421 aa18.4■□□□□ 0.54
ERCC1-213ENST00000592023 ECM2O94769 699 aaPredicted RBP18.39■□□□□ 0.53
ERCC1-213ENST00000592023 GDF11O95390 407 aa18.39■□□□□ 0.53
ERCC1-213ENST00000592023 ADD2P35612 726 aa18.39■□□□□ 0.53
ERCC1-213ENST00000592023 SHROOM1Q2M3G4 852 aaPredicted RBP18.39■□□□□ 0.53
ERCC1-213ENST00000592023 FOXP4Q8IVH2 680 aaPredicted RBP18.39■□□□□ 0.53
ERCC1-213ENST00000592023 GPATCH3Q96I76 525 aa18.39■□□□□ 0.53
ERCC1-213ENST00000592023 CRNKL1Q9BZJ0 848 aaKnown RBP18.39■□□□□ 0.53
ERCC1-213ENST00000592023 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.39■□□□□ 0.53
ERCC1-213ENST00000592023 ADGRA2Q96PE1 1338 aa18.39■□□□□ 0.53
ERCC1-213ENST00000592023 USP17L5A8MUK1 530 aa18.38■□□□□ 0.53
ERCC1-213ENST00000592023 CHGBP05060 677 aa18.38■□□□□ 0.53
ERCC1-213ENST00000592023 CYP2C8P10632 490 aa18.38■□□□□ 0.53
ERCC1-213ENST00000592023 SPP2Q13103 211 aa18.38■□□□□ 0.53
ERCC1-213ENST00000592023 METTL16Q86W50 562 aaKnown RBP18.38■□□□□ 0.53
ERCC1-213ENST00000592023 ZNF280CQ8ND82 737 aa18.38■□□□□ 0.53
ERCC1-213ENST00000592023 ARHGAP39Q9C0H5 1083 aa18.38■□□□□ 0.53
ERCC1-213ENST00000592023 ARMT1Q9H993 441 aa18.38■□□□□ 0.53
ERCC1-213ENST00000592023 MBD4O95243 580 aa18.37■□□□□ 0.53
ERCC1-213ENST00000592023 JAG1P78504 1218 aa18.37■□□□□ 0.53
ERCC1-213ENST00000592023 LACTBP83111 547 aaPredicted RBP18.37■□□□□ 0.53
ERCC1-213ENST00000592023 SDR42E1Q8WUS8 393 aa18.37■□□□□ 0.53
ERCC1-213ENST00000592023 TBC1D2Q9BYX2 928 aa18.37■□□□□ 0.53
ERCC1-213ENST00000592023 AS3MTQ9HBK9 375 aa18.37■□□□□ 0.53
ERCC1-213ENST00000592023 ZBTB21Q9ULJ3 1066 aa18.37■□□□□ 0.53
ERCC1-213ENST00000592023 PTPN22Q9Y2R2 807 aa18.37■□□□□ 0.53
ERCC1-213ENST00000592023 ASNSP08243 561 aa18.36■□□□□ 0.53
ERCC1-213ENST00000592023 HMGCS2P54868 508 aa18.36■□□□□ 0.53
ERCC1-213ENST00000592023 KIF22Q14807 665 aa18.36■□□□□ 0.53
ERCC1-213ENST00000592023 TREML2Q5T2D2 321 aa18.36■□□□□ 0.53
ERCC1-213ENST00000592023 C17orf99Q6UX52 265 aa18.36■□□□□ 0.53
ERCC1-213ENST00000592023 TTC6Q86TZ1 520 aa18.36■□□□□ 0.53
ERCC1-213ENST00000592023 EHD4Q9H223 541 aa18.36■□□□□ 0.53
ERCC1-213ENST00000592023 SERPINB13Q9UIV8 391 aa18.36■□□□□ 0.53
ERCC1-213ENST00000592023 AGTPBP1Q9UPW5 1226 aa18.36■□□□□ 0.53
ERCC1-213ENST00000592023 POLR3DP05423 398 aaPredicted RBP18.35■□□□□ 0.53
ERCC1-213ENST00000592023 ARHGEF6Q15052 776 aa18.35■□□□□ 0.53
ERCC1-213ENST00000592023 MCM9Q9NXL9 1143 aa18.35■□□□□ 0.53
ERCC1-213ENST00000592023 SLC45A1Q9Y2W3 748 aa18.35■□□□□ 0.53
ERCC1-213ENST00000592023 BAZ2AQ9UIF9 1905 aaKnown RBP18.34■□□□□ 0.53
ERCC1-213ENST00000592023 PRKAB2O43741 272 aa18.34■□□□□ 0.53
ERCC1-213ENST00000592023 PLCD1P51178 756 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms