RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 KIF20BQ96Q89 1820 aa19.38■□□□□ 0.69
SMARCA4-215ENST00000590574 KRBA2Q6ZNG9 492 aa19.38■□□□□ 0.69
SMARCA4-215ENST00000590574 NLRP3Q96P20 1036 aa19.38■□□□□ 0.69
SMARCA4-215ENST00000590574 MYO1BO43795 1136 aa19.37■□□□□ 0.69
SMARCA4-215ENST00000590574 CRACR2BQ8N4Y2 399 aaPredicted RBP19.37■□□□□ 0.69
SMARCA4-215ENST00000590574 MROH1Q8NDA8 1641 aa19.37■□□□□ 0.69
SMARCA4-215ENST00000590574 PPP1R13BQ96KQ4 1090 aa19.37■□□□□ 0.69
SMARCA4-215ENST00000590574 USP42Q9H9J4 1324 aaKnown RBP19.37■□□□□ 0.69
SMARCA4-215ENST00000590574 KRT86O43790 486 aa19.37■□□□□ 0.69
SMARCA4-215ENST00000590574 DDB1Q16531 1140 aa19.37■□□□□ 0.69
SMARCA4-215ENST00000590574 PI16Q6UXB8 463 aa19.37■□□□□ 0.69
SMARCA4-215ENST00000590574 SLF2Q8IX21 1173 aa19.37■□□□□ 0.69
SMARCA4-215ENST00000590574 KIF20AO95235 890 aa19.37■□□□□ 0.69
SMARCA4-215ENST00000590574 SLC39A14Q15043 492 aa19.37■□□□□ 0.69
SMARCA4-215ENST00000590574 ZNF827Q17R98 1081 aa19.37■□□□□ 0.69
SMARCA4-215ENST00000590574 GREM2Q9H772 168 aa19.37■□□□□ 0.69
SMARCA4-215ENST00000590574 PREX1Q8TCU6 1659 aa19.36■□□□□ 0.69
SMARCA4-215ENST00000590574 CHMP4BP1P59074 171 aa19.36■□□□□ 0.69
SMARCA4-215ENST00000590574 SETDB2Q96T68 719 aa19.36■□□□□ 0.69
SMARCA4-215ENST00000590574 PUS7LQ9H0K6 701 aaKnown RBP19.36■□□□□ 0.69
SMARCA4-215ENST00000590574 RDXP35241 583 aaKnown RBP19.36■□□□□ 0.69
SMARCA4-215ENST00000590574 STAMQ92783 540 aa19.36■□□□□ 0.69
SMARCA4-215ENST00000590574 DENND2AQ9ULE3 1009 aa19.36■□□□□ 0.69
SMARCA4-215ENST00000590574 BTBD18B2RXH4 712 aa19.36■□□□□ 0.69
SMARCA4-215ENST00000590574 GPHNQ9NQX3 736 aaPredicted RBP19.36■□□□□ 0.69
SMARCA4-215ENST00000590574 MED23Q9ULK4 1368 aa19.36■□□□□ 0.69
SMARCA4-215ENST00000590574 KAT6BQ8WYB5 2073 aa19.35■□□□□ 0.69
SMARCA4-215ENST00000590574 HSPA2P54652 639 aa19.35■□□□□ 0.69
SMARCA4-215ENST00000590574 KIF23Q02241 960 aaPredicted RBP19.35■□□□□ 0.69
SMARCA4-215ENST00000590574 ARID5BQ14865 1188 aa19.35■□□□□ 0.69
SMARCA4-215ENST00000590574 AXIN2Q9Y2T1 843 aa19.35■□□□□ 0.69
SMARCA4-215ENST00000590574 MAP2P11137 1827 aaKnown RBP19.35■□□□□ 0.69
SMARCA4-215ENST00000590574 PXDNLA1KZ92 1463 aa19.35■□□□□ 0.69
SMARCA4-215ENST00000590574 ZNF654Q8IZM8 581 aa19.35■□□□□ 0.69
SMARCA4-215ENST00000590574 ADGRL3Q9HAR2 1447 aa19.35■□□□□ 0.69
SMARCA4-215ENST00000590574 PHACTR2O75167 634 aa19.35■□□□□ 0.69
SMARCA4-215ENST00000590574 PPARAQ07869 468 aa19.35■□□□□ 0.69
SMARCA4-215ENST00000590574 MMRN2Q9H8L6 949 aa19.35■□□□□ 0.69
SMARCA4-215ENST00000590574 TUBB4BP68371 445 aa19.34■□□□□ 0.69
SMARCA4-215ENST00000590574 KIF5AQ12840 1032 aa19.34■□□□□ 0.69
SMARCA4-215ENST00000590574 GOLPH3LQ9H4A5 285 aa19.34■□□□□ 0.69
SMARCA4-215ENST00000590574 FBXO3Q9UK99 471 aa19.34■□□□□ 0.69
SMARCA4-215ENST00000590574 TTF2Q9UNY4 1162 aaKnown RBP19.34■□□□□ 0.69
SMARCA4-215ENST00000590574 PPP1R12BO60237 982 aaPredicted RBP19.34■□□□□ 0.69
SMARCA4-215ENST00000590574 CAPN2P17655 700 aa19.34■□□□□ 0.69
SMARCA4-215ENST00000590574 PHKA1P46020 1223 aa19.34■□□□□ 0.69
SMARCA4-215ENST00000590574 CCDC42Q96M95 316 aa19.34■□□□□ 0.69
SMARCA4-215ENST00000590574 NAPGQ99747 312 aaPredicted RBP19.34■□□□□ 0.69
SMARCA4-215ENST00000590574 BLZF1Q9H2G9 400 aa19.34■□□□□ 0.69
SMARCA4-215ENST00000590574 PPP2R2CQ9Y2T4 447 aa19.34■□□□□ 0.69
SMARCA4-215ENST00000590574 BICDL2A1A5D9 508 aa19.34■□□□□ 0.69
SMARCA4-215ENST00000590574 C6orf229H3BNL8 230 aa19.34■□□□□ 0.69
SMARCA4-215ENST00000590574 PAK1Q13153 545 aa19.34■□□□□ 0.69
SMARCA4-215ENST00000590574 CYP26C1Q6V0L0 522 aa19.34■□□□□ 0.69
SMARCA4-215ENST00000590574 HDXQ7Z353 690 aa19.34■□□□□ 0.69
SMARCA4-215ENST00000590574 DESI2Q9BSY9 194 aa19.34■□□□□ 0.69
SMARCA4-215ENST00000590574 C6orf50Q9HD87 102 aa19.34■□□□□ 0.69
SMARCA4-215ENST00000590574 ETF1P62495 437 aaKnown RBP19.34■□□□□ 0.69
SMARCA4-215ENST00000590574 PTPN21Q16825 1174 aa19.34■□□□□ 0.69
SMARCA4-215ENST00000590574 PARP10Q53GL7 1025 aa19.34■□□□□ 0.69
SMARCA4-215ENST00000590574 CCDC122Q5T0U0 273 aa19.34■□□□□ 0.69
SMARCA4-215ENST00000590574 VPS36Q86VN1 386 aa19.34■□□□□ 0.69
SMARCA4-215ENST00000590574 LRRC27Q9C0I9 530 aa19.34■□□□□ 0.69
SMARCA4-215ENST00000590574 PSDA5PKW4 1024 aaPredicted RBP19.33■□□□□ 0.69
SMARCA4-215ENST00000590574 GOLGA8FQ08AF8 430 aa19.33■□□□□ 0.69
SMARCA4-215ENST00000590574 GOLGA8DPQ0D2H9 430 aa19.33■□□□□ 0.69
SMARCA4-215ENST00000590574 TAB2Q9NYJ8 693 aa19.33■□□□□ 0.69
SMARCA4-215ENST00000590574 TACC1O75410 805 aa19.33■□□□□ 0.69
SMARCA4-215ENST00000590574 APOA5Q6Q788 366 aa19.33■□□□□ 0.69
SMARCA4-215ENST00000590574 UBE3CQ15386 1083 aa19.33■□□□□ 0.68
SMARCA4-215ENST00000590574 NAA15Q9BXJ9 866 aaKnown RBP19.33■□□□□ 0.68
SMARCA4-215ENST00000590574 PLA2G4DQ86XP0 818 aa19.33■□□□□ 0.68
SMARCA4-215ENST00000590574 PPP6R2O75170 966 aa19.32■□□□□ 0.68
SMARCA4-215ENST00000590574 H7C1W4 665 aa19.32■□□□□ 0.68
SMARCA4-215ENST00000590574 HLTFQ14527 1009 aaKnown RBP eCLIP19.32■□□□□ 0.681e-6■□□□□ 10.1
SMARCA4-215ENST00000590574 LONRF3Q496Y0 759 aa19.32■□□□□ 0.68
SMARCA4-215ENST00000590574 TCERG1LQ5VWI1 586 aa19.32■□□□□ 0.68
SMARCA4-215ENST00000590574 FERMT2Q96AC1 680 aa19.32■□□□□ 0.68
SMARCA4-215ENST00000590574 SPTLC3Q9NUV7 552 aa19.32■□□□□ 0.68
SMARCA4-215ENST00000590574 PCDHA5Q9Y5H7 936 aa19.32■□□□□ 0.68
SMARCA4-215ENST00000590574 WDHD1O75717 1129 aaPredicted RBP19.32■□□□□ 0.68
SMARCA4-215ENST00000590574 TRIM14Q14142 442 aa19.32■□□□□ 0.68
SMARCA4-215ENST00000590574 PPP2R5BQ15173 497 aa19.32■□□□□ 0.68
SMARCA4-215ENST00000590574 FANCBQ8NB91 859 aa19.32■□□□□ 0.68
SMARCA4-215ENST00000590574 ALDH8A1Q9H2A2 487 aaPredicted RBP19.32■□□□□ 0.68
SMARCA4-215ENST00000590574 RRP36Q96EU6 259 aaKnown RBP19.31■□□□□ 0.68
SMARCA4-215ENST00000590574 ATG3Q9NT62 314 aa19.31■□□□□ 0.68
SMARCA4-215ENST00000590574 NOP2P46087 812 aaKnown RBP19.31■□□□□ 0.68
SMARCA4-215ENST00000590574 AATFQ9NY61 560 aaKnown RBP eCLIP19.31■□□□□ 0.68
SMARCA4-215ENST00000590574 SETD1BQ9UPS6 1966 aaKnown RBP19.31■□□□□ 0.68
SMARCA4-215ENST00000590574 HEG1Q9ULI3 1381 aa19.31■□□□□ 0.68
SMARCA4-215ENST00000590574 TMCO5BA8MYB1 307 aa19.31■□□□□ 0.68
SMARCA4-215ENST00000590574 BCAMP50895 628 aa19.31■□□□□ 0.68
SMARCA4-215ENST00000590574 TMEM131LA2VDJ0 1609 aa19.31■□□□□ 0.68
SMARCA4-215ENST00000590574 PTPRUQ92729 1446 aa19.31■□□□□ 0.68
SMARCA4-215ENST00000590574 MACROD2A1Z1Q3 448 aa19.31■□□□□ 0.68
SMARCA4-215ENST00000590574 PDE8BO95263 885 aa19.31■□□□□ 0.68
SMARCA4-215ENST00000590574 ADD2P35612 726 aa19.31■□□□□ 0.68
SMARCA4-215ENST00000590574 AIFM3Q96NN9 605 aa19.31■□□□□ 0.68
SMARCA4-215ENST00000590574 GJB4Q9NTQ9 266 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms