RNA–Protein interactions for RNA: ENST00000590526.5

RTN2-208, Transcript of reticulon 2, human

TSL 5 BASIC

Gene RTN2, Length 2,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTN2-208	ENST00000590526	RIMBP2	O15034	1052 aa		28.59	■■■□□ 2.17
RTN2-208	ENST00000590526	PLCB2	Q00722	1185 aa		28.59	■■■□□ 2.17
RTN2-208	ENST00000590526	DYNLL2	Q96FJ2	89 aa		28.59	■■■□□ 2.17
RTN2-208	ENST00000590526	CD209	Q9NNX6	404 aa		28.59	■■■□□ 2.17
RTN2-208	ENST00000590526	MCM9	Q9NXL9	1143 aa		28.59	■■■□□ 2.17
RTN2-208	ENST00000590526	SSRP1	Q08945	709 aa	Known RBP	28.59	■■■□□ 2.17
RTN2-208	ENST00000590526	PDS5A	Q29RF7	1337 aa	Known RBP	28.58	■■■□□ 2.17
RTN2-208	ENST00000590526	AP5Z1	O43299	807 aa		28.58	■■■□□ 2.17
RTN2-208	ENST00000590526	CPLX2	Q6PUV4	134 aa	Known RBP	28.58	■■■□□ 2.17
RTN2-208	ENST00000590526	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	28.58	■■■□□ 2.17
RTN2-208	ENST00000590526	GGA1	Q9UJY5	639 aa		28.58	■■■□□ 2.17
RTN2-208	ENST00000590526	MRVI1	Q9Y6F6	885 aa		28.58	■■■□□ 2.17
RTN2-208	ENST00000590526	CDK5RAP2	Q96SN8	1893 aa		28.58	■■■□□ 2.17
RTN2-208	ENST00000590526		A0A1B0GVL5	298 aa		28.58	■■■□□ 2.17
RTN2-208	ENST00000590526	C6orf229	H3BNL8	230 aa		28.58	■■■□□ 2.17
RTN2-208	ENST00000590526	CDKL5	O76039	1030 aa		28.58	■■■□□ 2.17
RTN2-208	ENST00000590526	MARCKS	P29966	332 aa	Predicted RBP	28.58	■■■□□ 2.17
RTN2-208	ENST00000590526	ZNF804A	Q7Z570	1209 aa		28.58	■■■□□ 2.17
RTN2-208	ENST00000590526	FSIP1	Q8NA03	581 aa		28.58	■■■□□ 2.17
RTN2-208	ENST00000590526	LINC00301	Q8NCQ3	95 aa		28.58	■■■□□ 2.17
RTN2-208	ENST00000590526	TYRO3	Q06418	890 aa		28.57	■■■□□ 2.16
RTN2-208	ENST00000590526	STK38	Q15208	465 aa		28.57	■■■□□ 2.16
RTN2-208	ENST00000590526	NBPF11	Q86T75	865 aa		28.57	■■■□□ 2.16
RTN2-208	ENST00000590526	FANCB	Q8NB91	859 aa		28.57	■■■□□ 2.16
RTN2-208	ENST00000590526	RTEL1	Q9NZ71	1219 aa		28.57	■■■□□ 2.16
RTN2-208	ENST00000590526	ESPN	B1AK53	854 aa		28.57	■■■□□ 2.16
RTN2-208	ENST00000590526	FMNL1	O95466	1100 aa	Predicted RBP	28.57	■■■□□ 2.16
RTN2-208	ENST00000590526	SNW1	Q13573	536 aa	Known RBP	28.57	■■■□□ 2.16
RTN2-208	ENST00000590526	TBC1D16	Q8TBP0	767 aa		28.57	■■■□□ 2.16
RTN2-208	ENST00000590526	SHISA4	Q96DD7	197 aa		28.56	■■■□□ 2.16
RTN2-208	ENST00000590526	SAP30BP	Q9UHR5	308 aa	Known RBP	28.56	■■■□□ 2.16
RTN2-208	ENST00000590526	PLEKHA8P1	O95397	391 aa		28.55	■■■□□ 2.16
RTN2-208	ENST00000590526	RBM6	P78332	1123 aa	Known RBP	28.55	■■■□□ 2.16
RTN2-208	ENST00000590526	DDX19A	Q9NUU7	478 aa	Known RBP	28.55	■■■□□ 2.16
RTN2-208	ENST00000590526	IFNAR1	P17181	557 aa		28.55	■■■□□ 2.16
RTN2-208	ENST00000590526	WDR66	Q8TBY9	1149 aa		28.55	■■■□□ 2.16
RTN2-208	ENST00000590526	TGFBRAP1	Q8WUH2	860 aa		28.55	■■■□□ 2.16
RTN2-208	ENST00000590526	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	28.55	■■■□□ 2.16
RTN2-208	ENST00000590526	GNL2	Q13823	731 aa	Known RBP	28.54	■■■□□ 2.16
RTN2-208	ENST00000590526	IFIT1B	Q5T764	474 aa	Known RBP	28.54	■■■□□ 2.16
RTN2-208	ENST00000590526	SLC44A5	Q8NCS7	719 aa		28.54	■■■□□ 2.16
RTN2-208	ENST00000590526	CCDC192	P0DO97	292 aa		28.54	■■■□□ 2.16
RTN2-208	ENST00000590526	USP5	P45974	858 aa		28.54	■■■□□ 2.16
RTN2-208	ENST00000590526	SF3A1	Q15459	793 aa	Known RBP	28.54	■■■□□ 2.16
RTN2-208	ENST00000590526	MAPKAPK5	Q8IW41	473 aa		28.54	■■■□□ 2.16
RTN2-208	ENST00000590526	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	28.54	■■■□□ 2.16
RTN2-208	ENST00000590526	PIBF1	Q8WXW3	757 aa		28.54	■■■□□ 2.16
RTN2-208	ENST00000590526	FBXW7	Q969H0	707 aa		28.54	■■■□□ 2.16
RTN2-208	ENST00000590526	BTBD18	B2RXH4	712 aa		28.53	■■■□□ 2.16
RTN2-208	ENST00000590526	ANO6	Q4KMQ2	910 aa		28.53	■■■□□ 2.16
RTN2-208	ENST00000590526	LUZP1	Q86V48	1076 aa		28.53	■■■□□ 2.16
RTN2-208	ENST00000590526	ANO1	Q5XXA6	986 aa		28.53	■■■□□ 2.16
RTN2-208	ENST00000590526	SPTY2D1	Q68D10	685 aa	Predicted RBP	28.53	■■■□□ 2.16
RTN2-208	ENST00000590526	AKT1S1	Q96B36	256 aa		28.53	■■■□□ 2.16
RTN2-208	ENST00000590526	NDUFA8	P51970	172 aa		28.52	■■■□□ 2.16
RTN2-208	ENST00000590526	MXD3	Q9BW11	206 aa		28.52	■■■□□ 2.16
RTN2-208	ENST00000590526	DLEC1	Q9Y238	1755 aa		28.52	■■■□□ 2.16
RTN2-208	ENST00000590526	SPTLC2	O15270	562 aa		28.52	■■■□□ 2.16
RTN2-208	ENST00000590526	WDHD1	O75717	1129 aa	Predicted RBP	28.52	■■■□□ 2.16
RTN2-208	ENST00000590526	BRAP	Q7Z569	592 aa		28.52	■■■□□ 2.16
RTN2-208	ENST00000590526	ENGASE	Q8NFI3	743 aa		28.52	■■■□□ 2.16
RTN2-208	ENST00000590526	OXER1	Q8TDS5	423 aa		28.52	■■■□□ 2.16
RTN2-208	ENST00000590526	ATP8A2	Q9NTI2	1148 aa		28.52	■■■□□ 2.16
RTN2-208	ENST00000590526	ATP2B4	P23634	1241 aa		28.51	■■■□□ 2.15
RTN2-208	ENST00000590526	NR5A1	Q13285	461 aa		28.51	■■■□□ 2.15
RTN2-208	ENST00000590526	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	28.51	■■■□□ 2.15
RTN2-208	ENST00000590526	PPEF1	O14829	653 aa	Predicted RBP	28.51	■■■□□ 2.15
RTN2-208	ENST00000590526	MMP10	P09238	476 aa		28.51	■■■□□ 2.15
RTN2-208	ENST00000590526	HOXA10	P31260	410 aa	Predicted RBP	28.51	■■■□□ 2.15
RTN2-208	ENST00000590526	TRIM29	Q14134	588 aa		28.51	■■■□□ 2.15
RTN2-208	ENST00000590526	NAV1	Q8NEY1	1877 aa		28.5	■■■□□ 2.15
RTN2-208	ENST00000590526	FGR	P09769	529 aa		28.5	■■■□□ 2.15
RTN2-208	ENST00000590526	PLCD1	P51178	756 aa		28.5	■■■□□ 2.15
RTN2-208	ENST00000590526	CCDC73	Q6ZRK6	1079 aa		28.5	■■■□□ 2.15
RTN2-208	ENST00000590526	DNAJC25	Q9H1X3	360 aa		28.5	■■■□□ 2.15
RTN2-208	ENST00000590526	POLR3E	Q9NVU0	708 aa		28.5	■■■□□ 2.15
RTN2-208	ENST00000590526	MKRN1	Q9UHC7	482 aa	Known RBP	28.5	■■■□□ 2.15
RTN2-208	ENST00000590526	MTMR7	Q9Y216	660 aa		28.5	■■■□□ 2.15
RTN2-208	ENST00000590526	MROH7-TTC4	A0A0A0MT08	1334 aa		28.5	■■■□□ 2.15
RTN2-208	ENST00000590526		F8W031	263 aa	Predicted RBP	28.5	■■■□□ 2.15
RTN2-208	ENST00000590526	BBOX1	O75936	387 aa		28.5	■■■□□ 2.15
RTN2-208	ENST00000590526	ADCY5	O95622	1261 aa		28.5	■■■□□ 2.15
RTN2-208	ENST00000590526	MFSD14B	Q5SR56	506 aa		28.5	■■■□□ 2.15
RTN2-208	ENST00000590526	IQCA1	Q86XH1	822 aa		28.5	■■■□□ 2.15
RTN2-208	ENST00000590526	COL11A2	P13942	1736 aa	Predicted RBP	28.49	■■■□□ 2.15
RTN2-208	ENST00000590526	RBM43	Q6ZSC3	357 aa	Known RBP	28.49	■■■□□ 2.15
RTN2-208	ENST00000590526	RTFDC1	Q9BY42	306 aa	Predicted RBP	28.49	■■■□□ 2.15
RTN2-208	ENST00000590526	BTD	P43251	543 aa		28.48	■■■□□ 2.15
RTN2-208	ENST00000590526	ATL3	Q6DD88	541 aa		28.48	■■■□□ 2.15
RTN2-208	ENST00000590526	TMTC2	Q8N394	836 aa		28.48	■■■□□ 2.15
RTN2-208	ENST00000590526	CLIC6	Q96NY7	704 aa		28.48	■■■□□ 2.15
RTN2-208	ENST00000590526	VPS54	Q9P1Q0	977 aa		28.48	■■■□□ 2.15
RTN2-208	ENST00000590526	NID2	Q14112	1375 aa		28.48	■■■□□ 2.15
RTN2-208	ENST00000590526	LTBP1	Q14766	1721 aa		28.48	■■■□□ 2.15
RTN2-208	ENST00000590526	FAM205C	A6NFA0	338 aa		28.48	■■■□□ 2.15
RTN2-208	ENST00000590526	TSPY2	A6NKD2	308 aa		28.48	■■■□□ 2.15
RTN2-208	ENST00000590526	ATP2B1	P20020	1258 aa		28.48	■■■□□ 2.15
RTN2-208	ENST00000590526	GTF2I	P78347	998 aa		28.48	■■■□□ 2.15
RTN2-208	ENST00000590526	TROAP	Q12815	778 aa		28.48	■■■□□ 2.15
RTN2-208	ENST00000590526	DIS3L2	Q8IYB7	885 aa	Known RBP	28.48	■■■□□ 2.15

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms