RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 KBTBD3Q8NAB2 608 aa16.95■□□□□ 0.3
SCAMP4-212ENST00000590266 SDR42E1Q8WUS8 393 aa16.95■□□□□ 0.3
SCAMP4-212ENST00000590266 MCOLN1Q9GZU1 580 aa16.95■□□□□ 0.3
SCAMP4-212ENST00000590266 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.95■□□□□ 0.3
SCAMP4-212ENST00000590266 PI4KBQ9UBF8 816 aa16.95■□□□□ 0.3
SCAMP4-212ENST00000590266 IGF2BP3O00425 579 aaKnown RBP eCLIP16.94■□□□□ 0.3
SCAMP4-212ENST00000590266 INHBEP58166 350 aa16.94■□□□□ 0.3
SCAMP4-212ENST00000590266 NOL9Q5SY16 702 aaKnown RBP16.94■□□□□ 0.3
SCAMP4-212ENST00000590266 CCDC84Q86UT8 332 aaPredicted RBP16.94■□□□□ 0.3
SCAMP4-212ENST00000590266 SMC5Q8IY18 1101 aa16.94■□□□□ 0.3
SCAMP4-212ENST00000590266 FSD1Q9BTV5 496 aa16.94■□□□□ 0.3
SCAMP4-212ENST00000590266 COL2A1P02458 1487 aaPredicted RBP16.93■□□□□ 0.3
SCAMP4-212ENST00000590266 PRKAB2O43741 272 aa16.93■□□□□ 0.3
SCAMP4-212ENST00000590266 CTNND1O60716 968 aaKnown RBP16.93■□□□□ 0.3
SCAMP4-212ENST00000590266 POLR3DP05423 398 aaPredicted RBP16.93■□□□□ 0.3
SCAMP4-212ENST00000590266 PPATQ06203 517 aa16.93■□□□□ 0.3
SCAMP4-212ENST00000590266 PPIL2Q13356 520 aa16.93■□□□□ 0.3
SCAMP4-212ENST00000590266 SNAPC2Q13487 334 aa16.93■□□□□ 0.3
SCAMP4-212ENST00000590266 UBE3CQ15386 1083 aa16.93■□□□□ 0.3
SCAMP4-212ENST00000590266 OTUD7BQ6GQQ9 843 aa16.93■□□□□ 0.3
SCAMP4-212ENST00000590266 CHD1LQ86WJ1 897 aa16.93■□□□□ 0.3
SCAMP4-212ENST00000590266 BRI3BPQ8WY22 251 aa16.93■□□□□ 0.3
SCAMP4-212ENST00000590266 MS4A4AQ96JQ5 239 aa16.93■□□□□ 0.3
SCAMP4-212ENST00000590266 MCM9Q9NXL9 1143 aa16.93■□□□□ 0.3
SCAMP4-212ENST00000590266 HERC5Q9UII4 1024 aaKnown RBP16.93■□□□□ 0.3
SCAMP4-212ENST00000590266 ZHX2Q9Y6X8 837 aa16.93■□□□□ 0.3
SCAMP4-212ENST00000590266 OTOFQ9HC10 1997 aa16.93■□□□□ 0.3
SCAMP4-212ENST00000590266 TBC1D12O60347 775 aa16.92■□□□□ 0.3
SCAMP4-212ENST00000590266 CETPP11597 493 aa16.92■□□□□ 0.3
SCAMP4-212ENST00000590266 PTPRAP18433 802 aa16.92■□□□□ 0.3
SCAMP4-212ENST00000590266 PDE1AP54750 535 aa16.92■□□□□ 0.3
SCAMP4-212ENST00000590266 MAP3K10Q02779 954 aa16.92■□□□□ 0.3
SCAMP4-212ENST00000590266 PTPN18Q99952 460 aa16.92■□□□□ 0.3
SCAMP4-212ENST00000590266 PUS7LQ9H0K6 701 aaKnown RBP16.92■□□□□ 0.3
SCAMP4-212ENST00000590266 SALL3Q9BXA9 1300 aa16.92■□□□□ 0.3
SCAMP4-212ENST00000590266 RNF113AO15541 343 aaKnown RBP16.91■□□□□ 0.3
SCAMP4-212ENST00000590266 GDF11O95390 407 aa16.91■□□□□ 0.3
SCAMP4-212ENST00000590266 ALDH1A1P00352 501 aa16.91■□□□□ 0.3
SCAMP4-212ENST00000590266 NUCB1Q02818 461 aa16.91■□□□□ 0.3
SCAMP4-212ENST00000590266 DNAJC18Q9H819 358 aa16.91■□□□□ 0.3
SCAMP4-212ENST00000590266 SLC4A4Q9Y6R1 1079 aa16.91■□□□□ 0.3
SCAMP4-212ENST00000590266 DOCK2Q92608 1830 aa16.91■□□□□ 0.3
SCAMP4-212ENST00000590266 TRIM75PA6NK02 468 aa16.9■□□□□ 0.3
SCAMP4-212ENST00000590266 RRP1BQ14684 758 aaKnown RBP16.9■□□□□ 0.3
SCAMP4-212ENST00000590266 LRRFIP1Q32MZ4 808 aaKnown RBP16.9■□□□□ 0.3
SCAMP4-212ENST00000590266 TTC6Q86TZ1 520 aa16.9■□□□□ 0.3
SCAMP4-212ENST00000590266 FOXP4Q8IVH2 680 aaPredicted RBP16.9■□□□□ 0.3
SCAMP4-212ENST00000590266 FAM43AQ8N2R8 423 aa16.9■□□□□ 0.3
SCAMP4-212ENST00000590266 R3HDMLQ9H3Y0 253 aa16.9■□□□□ 0.3
SCAMP4-212ENST00000590266 DCP1AQ9NPI6 582 aaPredicted RBP16.9■□□□□ 0.3
SCAMP4-212ENST00000590266 MYO5AQ9Y4I1 1855 aaKnown RBP16.9■□□□□ 0.3
SCAMP4-212ENST00000590266 TESPA1A2RU30 521 aaPredicted RBP16.89■□□□□ 0.29
SCAMP4-212ENST00000590266 ZFYP08048 801 aaPredicted RBP16.89■□□□□ 0.29
SCAMP4-212ENST00000590266 CYP2D6P10635 497 aa16.89■□□□□ 0.29
SCAMP4-212ENST00000590266 CAP2P40123 477 aa16.89■□□□□ 0.29
SCAMP4-212ENST00000590266 PLCD1P51178 756 aa16.89■□□□□ 0.29
SCAMP4-212ENST00000590266 EVX2Q03828 476 aa16.89■□□□□ 0.29
SCAMP4-212ENST00000590266 APPBP2Q92624 585 aa16.89■□□□□ 0.29
SCAMP4-212ENST00000590266 OSBP2Q969R2 916 aa16.89■□□□□ 0.29
SCAMP4-212ENST00000590266 DDRGK1Q96HY6 314 aa16.89■□□□□ 0.29
SCAMP4-212ENST00000590266 STAP2Q9UGK3 403 aa16.89■□□□□ 0.29
SCAMP4-212ENST00000590266 TRIM6-TRIM34B2RNG4 842 aa16.88■□□□□ 0.29
SCAMP4-212ENST00000590266 BTBD19C9JJ37 291 aa16.88■□□□□ 0.29
SCAMP4-212ENST00000590266 CRHR2Q13324 411 aa16.88■□□□□ 0.29
SCAMP4-212ENST00000590266 TAF1CQ15572 869 aaPredicted RBP16.88■□□□□ 0.29
SCAMP4-212ENST00000590266 SHROOM1Q2M3G4 852 aaPredicted RBP16.88■□□□□ 0.29
SCAMP4-212ENST00000590266 GADL1Q6ZQY3 521 aa16.88■□□□□ 0.29
SCAMP4-212ENST00000590266 SERPINB13Q9UIV8 391 aa16.88■□□□□ 0.29
SCAMP4-212ENST00000590266 KCNH4Q9UQ05 1017 aa16.88■□□□□ 0.29
SCAMP4-212ENST00000590266 M0R2C6 588 aa16.87■□□□□ 0.29
SCAMP4-212ENST00000590266 GPR25O00155 361 aa16.87■□□□□ 0.29
SCAMP4-212ENST00000590266 AMOTL1Q8IY63 956 aa16.87■□□□□ 0.29
SCAMP4-212ENST00000590266 ZNF296Q8WUU4 475 aaPredicted RBP16.87■□□□□ 0.29
SCAMP4-212ENST00000590266 RILPL2Q969X0 211 aa16.87■□□□□ 0.29
SCAMP4-212ENST00000590266 SEC62Q99442 399 aaKnown RBP16.87■□□□□ 0.29
SCAMP4-212ENST00000590266 ATP8A2Q9NTI2 1148 aa16.87■□□□□ 0.29
SCAMP4-212ENST00000590266 AFG3L2Q9Y4W6 797 aa16.87■□□□□ 0.29
SCAMP4-212ENST00000590266 AK9Q5TCS8 1911 aa16.87■□□□□ 0.29
SCAMP4-212ENST00000590266 CYP2D7A0A087X1C5 515 aa16.86■□□□□ 0.29
SCAMP4-212ENST00000590266 USP17L5A8MUK1 530 aa16.86■□□□□ 0.29
SCAMP4-212ENST00000590266 CXCL11O14625 94 aa16.86■□□□□ 0.29
SCAMP4-212ENST00000590266 GPAA1O43292 621 aa16.86■□□□□ 0.29
SCAMP4-212ENST00000590266 APPP05067 770 aa16.86■□□□□ 0.29
SCAMP4-212ENST00000590266 JAG1P78504 1218 aa16.86■□□□□ 0.29
SCAMP4-212ENST00000590266 SPP2Q13103 211 aa16.86■□□□□ 0.29
SCAMP4-212ENST00000590266 CTU1Q7Z7A3 348 aaKnown RBP16.86■□□□□ 0.29
SCAMP4-212ENST00000590266 METTL16Q86W50 562 aaKnown RBP16.86■□□□□ 0.29
SCAMP4-212ENST00000590266 EVI5LQ96CN4 794 aa16.86■□□□□ 0.29
SCAMP4-212ENST00000590266 STRBPQ96SI9 672 aaKnown RBP16.86■□□□□ 0.29
SCAMP4-212ENST00000590266 EHD4Q9H223 541 aa16.86■□□□□ 0.29
SCAMP4-212ENST00000590266 ZFYVE28Q9HCC9 887 aa16.86■□□□□ 0.29
SCAMP4-212ENST00000590266 USP17L12C9JPN9 530 aa16.85■□□□□ 0.29
SCAMP4-212ENST00000590266 USP17L21D6R901 530 aa16.85■□□□□ 0.29
SCAMP4-212ENST00000590266 PDHXO00330 501 aa16.85■□□□□ 0.29
SCAMP4-212ENST00000590266 MPHOSPH10O00566 681 aaKnown RBP16.85■□□□□ 0.29
SCAMP4-212ENST00000590266 GH2P01242 217 aa16.85■□□□□ 0.29
SCAMP4-212ENST00000590266 ASNSP08243 561 aa16.85■□□□□ 0.29
SCAMP4-212ENST00000590266 MLLT1Q03111 559 aaPredicted RBP16.85■□□□□ 0.29
SCAMP4-212ENST00000590266 CERKLQ49MI3 558 aaPredicted RBP16.85■□□□□ 0.29
SCAMP4-212ENST00000590266 PLEKHM2Q8IWE5 1019 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms