RNA–Protein interactions for RNA: ENST00000590035.5

RETREG3-209, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-209ENST00000590035 GRK4P32298 578 aa12.83□□□□□ -0.36
RETREG3-209ENST00000590035 PPP4CP60510 307 aa12.83□□□□□ -0.36
RETREG3-209ENST00000590035 GSTO1P78417 241 aa12.83□□□□□ -0.36
RETREG3-209ENST00000590035 ATP8B2P98198 1209 aa12.83□□□□□ -0.36
RETREG3-209ENST00000590035 PRKCZQ05513 592 aa12.83□□□□□ -0.36
RETREG3-209ENST00000590035 PICALMQ13492 652 aa12.83□□□□□ -0.36
RETREG3-209ENST00000590035 TNNI3KQ59H18 835 aa12.83□□□□□ -0.36
RETREG3-209ENST00000590035 ZKSCAN2Q63HK3 967 aa12.83□□□□□ -0.36
RETREG3-209ENST00000590035 CCDC84Q86UT8 332 aaPredicted RBP12.83□□□□□ -0.36
RETREG3-209ENST00000590035 CLUAP1Q96AJ1 413 aa12.83□□□□□ -0.36
RETREG3-209ENST00000590035 AGTPBP1Q9UPW5 1226 aa12.83□□□□□ -0.36
RETREG3-209ENST00000590035 FPGT-TNNI3KV9GXZ4 949 aa12.83□□□□□ -0.36
RETREG3-209ENST00000590035 RLBP1P12271 317 aa12.82□□□□□ -0.36
RETREG3-209ENST00000590035 HOXD10P28358 340 aa12.82□□□□□ -0.36
RETREG3-209ENST00000590035 GJA8P48165 433 aa12.82□□□□□ -0.36
RETREG3-209ENST00000590035 G3BP1Q13283 466 aaKnown RBP eCLIP12.82□□□□□ -0.36
RETREG3-209ENST00000590035 SLC4A8Q2Y0W8 1093 aa12.82□□□□□ -0.36
RETREG3-209ENST00000590035 SH3D19Q5HYK7 790 aa12.82□□□□□ -0.36
RETREG3-209ENST00000590035 TREML2Q5T2D2 321 aa12.82□□□□□ -0.36
RETREG3-209ENST00000590035 ADGRA1Q86SQ6 560 aa12.82□□□□□ -0.36
RETREG3-209ENST00000590035 ZSCAN29Q8IWY8 852 aaPredicted RBP12.82□□□□□ -0.36
RETREG3-209ENST00000590035 PROCA1Q8NCQ7 364 aaPredicted RBP12.82□□□□□ -0.36
RETREG3-209ENST00000590035 FRAT1Q92837 279 aaPredicted RBP12.82□□□□□ -0.36
RETREG3-209ENST00000590035 DBNDD2Q9BQY9 259 aa12.82□□□□□ -0.36
RETREG3-209ENST00000590035 DNAJC18Q9H819 358 aa12.82□□□□□ -0.36
RETREG3-209ENST00000590035 GABRQQ9UN88 632 aa12.82□□□□□ -0.36
RETREG3-209ENST00000590035 FAM196BA6NMK8 535 aa12.81□□□□□ -0.36
RETREG3-209ENST00000590035 ZBTB7BO15156 539 aaPredicted RBP12.81□□□□□ -0.36
RETREG3-209ENST00000590035 FMNL1O95466 1100 aaPredicted RBP12.81□□□□□ -0.36
RETREG3-209ENST00000590035 CYP2E1P05181 493 aaPredicted RBP12.81□□□□□ -0.36
RETREG3-209ENST00000590035 GJB1P08034 283 aa12.81□□□□□ -0.36
RETREG3-209ENST00000590035 CAP2P40123 477 aa12.81□□□□□ -0.36
RETREG3-209ENST00000590035 FCGRTP55899 365 aa12.81□□□□□ -0.36
RETREG3-209ENST00000590035 IRF5Q13568 498 aa12.81□□□□□ -0.36
RETREG3-209ENST00000590035 SH3RF3Q8TEJ3 882 aaPredicted RBP12.81□□□□□ -0.36
RETREG3-209ENST00000590035 TBC1D2Q9BYX2 928 aa12.81□□□□□ -0.36
RETREG3-209ENST00000590035 HERC5Q9UII4 1024 aaKnown RBP12.81□□□□□ -0.36
RETREG3-209ENST00000590035 LAMA3Q16787 3333 aa12.8□□□□□ -0.36
RETREG3-209ENST00000590035 TRIM75PA6NK02 468 aa12.8□□□□□ -0.36
RETREG3-209ENST00000590035 CCL5P13501 91 aa12.8□□□□□ -0.36
RETREG3-209ENST00000590035 JAG1P78504 1218 aa12.8□□□□□ -0.36
RETREG3-209ENST00000590035 FAM110CQ1W6H9 321 aa12.8□□□□□ -0.36
RETREG3-209ENST00000590035 TEX11Q8IYF3 940 aa12.8□□□□□ -0.36
RETREG3-209ENST00000590035 SLAIN1Q8ND83 568 aa12.8□□□□□ -0.36
RETREG3-209ENST00000590035 PXYLP1Q8TE99 480 aa12.8□□□□□ -0.36
RETREG3-209ENST00000590035 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.8□□□□□ -0.36
RETREG3-209ENST00000590035 RAI14Q9P0K7 980 aa12.8□□□□□ -0.36
RETREG3-209ENST00000590035 DBNLQ9UJU6 430 aaKnown RBP12.8□□□□□ -0.36
RETREG3-209ENST00000590035 PLXNB2O15031 1838 aa12.8□□□□□ -0.36
RETREG3-209ENST00000590035 FLT3LGP49771 235 aa12.79□□□□□ -0.36
RETREG3-209ENST00000590035 FXR1P51114 621 aaKnown RBP eCLIP12.79□□□□□ -0.36
RETREG3-209ENST00000590035 GORABQ5T7V8 394 aa12.79□□□□□ -0.36
RETREG3-209ENST00000590035 GADL1Q6ZQY3 521 aa12.79□□□□□ -0.36
RETREG3-209ENST00000590035 ZNF280CQ8ND82 737 aa12.79□□□□□ -0.36
RETREG3-209ENST00000590035 RAET1EQ8TD07 263 aa12.79□□□□□ -0.36
RETREG3-209ENST00000590035 WDR18Q9BV38 432 aa12.79□□□□□ -0.36
RETREG3-209ENST00000590035 DHX36Q9H2U1 1008 aaKnown RBP12.79□□□□□ -0.36
RETREG3-209ENST00000590035 TLR7Q9NYK1 1049 aaKnown RBP12.79□□□□□ -0.36
RETREG3-209ENST00000590035 FLT1P17948 1338 aa12.79□□□□□ -0.36
RETREG3-209ENST00000590035 DDX60LQ5H9U9 1706 aaKnown RBP12.79□□□□□ -0.36
RETREG3-209ENST00000590035 ECM2O94769 699 aaPredicted RBP12.78□□□□□ -0.36
RETREG3-209ENST00000590035 MYCP01106 439 aaPredicted RBP12.78□□□□□ -0.36
RETREG3-209ENST00000590035 SPP2Q13103 211 aa12.78□□□□□ -0.36
RETREG3-209ENST00000590035 NAA16Q6N069 864 aaPredicted RBP12.78□□□□□ -0.36
RETREG3-209ENST00000590035 NKX2-3Q8TAU0 364 aa12.78□□□□□ -0.36
RETREG3-209ENST00000590035 EAF2Q96CJ1 260 aaPredicted RBP12.78□□□□□ -0.36
RETREG3-209ENST00000590035 UNC93B1Q9H1C4 597 aa12.78□□□□□ -0.36
RETREG3-209ENST00000590035 PRO3102Q9H379 93 aa12.78□□□□□ -0.36
RETREG3-209ENST00000590035 C1orf115Q9H7X2 142 aa12.78□□□□□ -0.36
RETREG3-209ENST00000590035 PIH1D3Q9NQM4 214 aaKnown RBP12.78□□□□□ -0.36
RETREG3-209ENST00000590035 PAK6Q9NQU5 681 aaPredicted RBP12.78□□□□□ -0.36
RETREG3-209ENST00000590035 SNRKQ9NRH2 765 aa12.78□□□□□ -0.36
RETREG3-209ENST00000590035 AATFQ9NY61 560 aaKnown RBP eCLIP12.78□□□□□ -0.36
RETREG3-209ENST00000590035 LRP2BPQ9P2M1 347 aa12.78□□□□□ -0.36
RETREG3-209ENST00000590035 PI4KBQ9UBF8 816 aa12.78□□□□□ -0.36
RETREG3-209ENST00000590035 USP17L5A8MUK1 530 aa12.77□□□□□ -0.37
RETREG3-209ENST00000590035 H0YGN5 161 aa12.77□□□□□ -0.37
RETREG3-209ENST00000590035 ADCY3O60266 1144 aa12.77□□□□□ -0.37
RETREG3-209ENST00000590035 SURF6O75683 361 aaKnown RBP12.77□□□□□ -0.37
RETREG3-209ENST00000590035 PLCG2P16885 1265 aa12.77□□□□□ -0.37
RETREG3-209ENST00000590035 ZAP70P43403 619 aa12.77□□□□□ -0.37
RETREG3-209ENST00000590035 HMGCS2P54868 508 aa12.77□□□□□ -0.37
RETREG3-209ENST00000590035 CEP85Q6P2H3 762 aa12.77□□□□□ -0.37
RETREG3-209ENST00000590035 U2AF1L4Q8WU68 220 aaKnown RBP12.77□□□□□ -0.37
RETREG3-209ENST00000590035 CRISPLD2Q9H0B8 497 aa12.77□□□□□ -0.37
RETREG3-209ENST00000590035 MORF4L1Q9UBU8 362 aa12.77□□□□□ -0.37
RETREG3-209ENST00000590035 GJD2Q9UKL4 321 aa12.77□□□□□ -0.37
RETREG3-209ENST00000590035 PNMA3Q9UL41 463 aa12.77□□□□□ -0.37
RETREG3-209ENST00000590035 COLQQ9Y215 455 aaPredicted RBP12.77□□□□□ -0.37
RETREG3-209ENST00000590035 ALPK3Q96L96 1907 aa12.76□□□□□ -0.37
RETREG3-209ENST00000590035 SGPL1O95470 568 aa12.76□□□□□ -0.37
RETREG3-209ENST00000590035 BAG3O95817 575 aa12.76□□□□□ -0.37
RETREG3-209ENST00000590035 INHAP05111 366 aa12.76□□□□□ -0.37
RETREG3-209ENST00000590035 CAPN2P17655 700 aa12.76□□□□□ -0.37
RETREG3-209ENST00000590035 HOXA7P31268 230 aaPredicted RBP12.76□□□□□ -0.37
RETREG3-209ENST00000590035 GCLCP48506 637 aaPredicted RBP12.76□□□□□ -0.37
RETREG3-209ENST00000590035 UBXN2AP68543 259 aa12.76□□□□□ -0.37
RETREG3-209ENST00000590035 SHROOM1Q2M3G4 852 aaPredicted RBP12.76□□□□□ -0.37
RETREG3-209ENST00000590035 CCDC158Q5M9N0 1113 aa12.76□□□□□ -0.37
RETREG3-209ENST00000590035 TTC39AQ5SRH9 613 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms