RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 NEUROD6Q96NK8 337 aa17.2■□□□□ 0.34
SF3A2-205ENST00000590034 RBM27Q9P2N5 1060 aaKnown RBP17.2■□□□□ 0.34
SF3A2-205ENST00000590034 FOCADQ5VW36 1801 aa17.19■□□□□ 0.34
SF3A2-205ENST00000590034 PNMA6EA0A0J9YXQ4 647 aa17.19■□□□□ 0.34
SF3A2-205ENST00000590034 FARP2O94887 1054 aaPredicted RBP17.19■□□□□ 0.34
SF3A2-205ENST00000590034 TRIM27P14373 513 aa17.19■□□□□ 0.34
SF3A2-205ENST00000590034 ARID4AP29374 1257 aaPredicted RBP17.19■□□□□ 0.34
SF3A2-205ENST00000590034 MCAMP43121 646 aa17.19■□□□□ 0.34
SF3A2-205ENST00000590034 IRF5Q13568 498 aa17.19■□□□□ 0.34
SF3A2-205ENST00000590034 OSBPL5Q9H0X9 879 aaPredicted RBP17.19■□□□□ 0.34
SF3A2-205ENST00000590034 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.19■□□□□ 0.34
SF3A2-205ENST00000590034 LAMA3Q16787 3333 aa17.18■□□□□ 0.34
SF3A2-205ENST00000590034 SGPL1O95470 568 aa17.18■□□□□ 0.34
SF3A2-205ENST00000590034 SPP2Q13103 211 aa17.18■□□□□ 0.34
SF3A2-205ENST00000590034 PXYLP1Q8TE99 480 aa17.18■□□□□ 0.34
SF3A2-205ENST00000590034 PRO3102Q9H379 93 aa17.18■□□□□ 0.34
SF3A2-205ENST00000590034 PLXNB2O15031 1838 aa17.18■□□□□ 0.34
SF3A2-205ENST00000590034 FAM110CQ1W6H9 321 aa17.17■□□□□ 0.34
SF3A2-205ENST00000590034 PROCA1Q8NCQ7 364 aaPredicted RBP17.17■□□□□ 0.34
SF3A2-205ENST00000590034 HTATIP2Q9BUP3 242 aa17.17■□□□□ 0.34
SF3A2-205ENST00000590034 PAK6Q9NQU5 681 aaPredicted RBP17.17■□□□□ 0.34
SF3A2-205ENST00000590034 RAI14Q9P0K7 980 aa17.17■□□□□ 0.34
SF3A2-205ENST00000590034 HMGCS2P54868 508 aa17.16■□□□□ 0.34
SF3A2-205ENST00000590034 GSTO1P78417 241 aa17.16■□□□□ 0.34
SF3A2-205ENST00000590034 ZNF280CQ8ND82 737 aa17.16■□□□□ 0.34
SF3A2-205ENST00000590034 SH3RF3Q8TEJ3 882 aaPredicted RBP17.16■□□□□ 0.34
SF3A2-205ENST00000590034 DEFB118Q96PH6 123 aa17.16■□□□□ 0.34
SF3A2-205ENST00000590034 ZBTB7BO15156 539 aaPredicted RBP17.15■□□□□ 0.34
SF3A2-205ENST00000590034 MAP4K4O95819 1239 aaPredicted RBP17.15■□□□□ 0.34
SF3A2-205ENST00000590034 GNAI2P04899 355 aa17.15■□□□□ 0.34
SF3A2-205ENST00000590034 LDHCP07864 332 aa17.15■□□□□ 0.34
SF3A2-205ENST00000590034 CAP2P40123 477 aa17.15■□□□□ 0.34
SF3A2-205ENST00000590034 GORABQ5T7V8 394 aa17.15■□□□□ 0.34
SF3A2-205ENST00000590034 TEX11Q8IYF3 940 aa17.15■□□□□ 0.34
SF3A2-205ENST00000590034 PNMA3Q9UL41 463 aa17.15■□□□□ 0.34
SF3A2-205ENST00000590034 TAOK2Q9UL54 1235 aa17.15■□□□□ 0.34
SF3A2-205ENST00000590034 BCAR3O75815 825 aa17.14■□□□□ 0.33
SF3A2-205ENST00000590034 JAG1P78504 1218 aa17.14■□□□□ 0.33
SF3A2-205ENST00000590034 SHROOM1Q2M3G4 852 aaPredicted RBP17.14■□□□□ 0.33
SF3A2-205ENST00000590034 ADGRA1Q86SQ6 560 aa17.14■□□□□ 0.33
SF3A2-205ENST00000590034 CLUAP1Q96AJ1 413 aa17.14■□□□□ 0.33
SF3A2-205ENST00000590034 COA7Q96BR5 231 aa17.14■□□□□ 0.33
SF3A2-205ENST00000590034 ASCC2Q9H1I8 757 aaPredicted RBP17.14■□□□□ 0.33
SF3A2-205ENST00000590034 DNAJC18Q9H819 358 aa17.14■□□□□ 0.33
SF3A2-205ENST00000590034 SH3D19Q5HYK7 790 aa17.13■□□□□ 0.33
SF3A2-205ENST00000590034 ATF7IPQ6VMQ6 1270 aa17.13■□□□□ 0.33
SF3A2-205ENST00000590034 DIS3LQ8TF46 1054 aaKnown RBP17.13■□□□□ 0.33
SF3A2-205ENST00000590034 CRISPLD2Q9H0B8 497 aa17.13■□□□□ 0.33
SF3A2-205ENST00000590034 SNRKQ9NRH2 765 aa17.13■□□□□ 0.33
SF3A2-205ENST00000590034 AATFQ9NY61 560 aaKnown RBP eCLIP17.13■□□□□ 0.33
SF3A2-205ENST00000590034 LRP2BPQ9P2M1 347 aa17.13■□□□□ 0.33
SF3A2-205ENST00000590034 GJD2Q9UKL4 321 aa17.13■□□□□ 0.33
SF3A2-205ENST00000590034 USP17L5A8MUK1 530 aa17.12■□□□□ 0.33
SF3A2-205ENST00000590034 PEX10O60683 326 aa17.12■□□□□ 0.33
SF3A2-205ENST00000590034 TFRCP02786 760 aaKnown RBP17.12■□□□□ 0.33
SF3A2-205ENST00000590034 GCLCP48506 637 aaPredicted RBP17.12■□□□□ 0.33
SF3A2-205ENST00000590034 TRIM32Q13049 653 aa17.12■□□□□ 0.33
SF3A2-205ENST00000590034 G3BP1Q13283 466 aaKnown RBP eCLIP17.12■□□□□ 0.33
SF3A2-205ENST00000590034 FRAT1Q92837 279 aaPredicted RBP17.12■□□□□ 0.33
SF3A2-205ENST00000590034 HERC5Q9UII4 1024 aaKnown RBP17.12■□□□□ 0.33
SF3A2-205ENST00000590034 NR2E3Q9Y5X4 410 aa17.12■□□□□ 0.33
SF3A2-205ENST00000590034 DDX60LQ5H9U9 1706 aaKnown RBP17.11■□□□□ 0.33
SF3A2-205ENST00000590034 UQCRFS1P1P0C7P4 283 aa17.11■□□□□ 0.33
SF3A2-205ENST00000590034 MTMR2Q13614 643 aa17.11■□□□□ 0.33
SF3A2-205ENST00000590034 POLA2Q14181 598 aa17.11■□□□□ 0.33
SF3A2-205ENST00000590034 TNNI3KQ59H18 835 aa17.11■□□□□ 0.33
SF3A2-205ENST00000590034 PAWRQ96IZ0 340 aaKnown RBP17.11■□□□□ 0.33
SF3A2-205ENST00000590034 DBNDD2Q9BQY9 259 aa17.11■□□□□ 0.33
SF3A2-205ENST00000590034 TBC1D2Q9BYX2 928 aa17.11■□□□□ 0.33
SF3A2-205ENST00000590034 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.11■□□□□ 0.33
SF3A2-205ENST00000590034 PI4KBQ9UBF8 816 aa17.11■□□□□ 0.33
SF3A2-205ENST00000590034 FPGT-TNNI3KV9GXZ4 949 aa17.11■□□□□ 0.33
SF3A2-205ENST00000590034 FLT1P17948 1338 aa17.11■□□□□ 0.33
SF3A2-205ENST00000590034 IPO8O15397 1037 aaKnown RBP17.1■□□□□ 0.33
SF3A2-205ENST00000590034 EVI5O60447 810 aa17.1■□□□□ 0.33
SF3A2-205ENST00000590034 HMGCRP04035 888 aa17.1■□□□□ 0.33
SF3A2-205ENST00000590034 CYP2E1P05181 493 aaPredicted RBP17.1■□□□□ 0.33
SF3A2-205ENST00000590034 NAA16Q6N069 864 aaPredicted RBP17.1■□□□□ 0.33
SF3A2-205ENST00000590034 METTL16Q86W50 562 aaKnown RBP17.1■□□□□ 0.33
SF3A2-205ENST00000590034 MAPKAPK5Q8IW41 473 aa17.1■□□□□ 0.33
SF3A2-205ENST00000590034 TMEM57Q8N5G2 664 aa17.1■□□□□ 0.33
SF3A2-205ENST00000590034 TGFBRAP1Q8WUH2 860 aa17.1■□□□□ 0.33
SF3A2-205ENST00000590034 WDR18Q9BV38 432 aa17.1■□□□□ 0.33
SF3A2-205ENST00000590034 MORF4L1Q9UBU8 362 aa17.1■□□□□ 0.33
SF3A2-205ENST00000590034 MYH1P12882 1939 aa17.09■□□□□ 0.33
SF3A2-205ENST00000590034 CCER2I3L3R5 266 aa17.09■□□□□ 0.33
SF3A2-205ENST00000590034 MNX1P50219 401 aaPredicted RBP17.09■□□□□ 0.33
SF3A2-205ENST00000590034 BACE1P56817 501 aa17.09■□□□□ 0.33
SF3A2-205ENST00000590034 PPP4CP60510 307 aa17.09■□□□□ 0.33
SF3A2-205ENST00000590034 PABPC4Q13310 644 aaKnown RBP eCLIP17.09■□□□□ 0.33
SF3A2-205ENST00000590034 DHX36Q9H2U1 1008 aaKnown RBP17.09■□□□□ 0.33
SF3A2-205ENST00000590034 AS3MTQ9HBK9 375 aa17.09■□□□□ 0.33
SF3A2-205ENST00000590034 TXNRD2Q9NNW7 524 aa17.09■□□□□ 0.33
SF3A2-205ENST00000590034 GPR108Q9NPR9 543 aa17.09■□□□□ 0.33
SF3A2-205ENST00000590034 GDF11O95390 407 aa17.08■□□□□ 0.32
SF3A2-205ENST00000590034 TTC39AQ5SRH9 613 aa17.08■□□□□ 0.32
SF3A2-205ENST00000590034 SSH3Q8TE77 659 aa17.08■□□□□ 0.32
SF3A2-205ENST00000590034 TRIB2Q92519 343 aa17.08■□□□□ 0.32
SF3A2-205ENST00000590034 P2RX7Q99572 595 aaKnown RBP17.08■□□□□ 0.32
SF3A2-205ENST00000590034 NOL10Q9BSC4 688 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms