RNA–Protein interactions for RNA: ENST00000590000.1

SAFB2-205, Transcript of scaffold attachment factor B2, humanhuman

TSL 2

Gene SAFB2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-205ENST00000590000 IRF5Q13568 498 aa17.52■□□□□ 0.4
SAFB2-205ENST00000590000 DEFB118Q96PH6 123 aa17.52■□□□□ 0.4
SAFB2-205ENST00000590000 CRISPLD2Q9H0B8 497 aa17.52■□□□□ 0.4
SAFB2-205ENST00000590000 AGTPBP1Q9UPW5 1226 aa17.52■□□□□ 0.4
SAFB2-205ENST00000590000 ZBED9Q6R2W3 1325 aa17.51■□□□□ 0.39
SAFB2-205ENST00000590000 PNMA6EA0A0J9YXQ4 647 aa17.51■□□□□ 0.39
SAFB2-205ENST00000590000 TBC1D12O60347 775 aa17.51■□□□□ 0.39
SAFB2-205ENST00000590000 MCAMP43121 646 aa17.51■□□□□ 0.39
SAFB2-205ENST00000590000 POTEEQ6S8J3 1075 aa17.51■□□□□ 0.39
SAFB2-205ENST00000590000 NKX2-3Q8TAU0 364 aa17.51■□□□□ 0.39
SAFB2-205ENST00000590000 FRAT1Q92837 279 aaPredicted RBP17.51■□□□□ 0.39
SAFB2-205ENST00000590000 API5Q9BZZ5 524 aaKnown RBP17.51■□□□□ 0.39
SAFB2-205ENST00000590000 GJD2Q9UKL4 321 aa17.51■□□□□ 0.39
SAFB2-205ENST00000590000 TNPO2O14787 897 aaKnown RBP17.5■□□□□ 0.39
SAFB2-205ENST00000590000 SRGAP3O43295 1099 aa17.5■□□□□ 0.39
SAFB2-205ENST00000590000 UBXN2AP68543 259 aa17.5■□□□□ 0.39
SAFB2-205ENST00000590000 SPP2Q13103 211 aa17.5■□□□□ 0.39
SAFB2-205ENST00000590000 ZGPATQ8N5A5 531 aaKnown RBP17.5■□□□□ 0.39
SAFB2-205ENST00000590000 PXYLP1Q8TE99 480 aa17.5■□□□□ 0.39
SAFB2-205ENST00000590000 DNAJC18Q9H819 358 aa17.5■□□□□ 0.39
SAFB2-205ENST00000590000 COL2A1P02458 1487 aaPredicted RBP17.5■□□□□ 0.39
SAFB2-205ENST00000590000 FOCADQ5VW36 1801 aa17.49■□□□□ 0.39
SAFB2-205ENST00000590000 NPM3O75607 178 aaKnown RBP17.49■□□□□ 0.39
SAFB2-205ENST00000590000 HMGCS2P54868 508 aa17.49■□□□□ 0.39
SAFB2-205ENST00000590000 ERICH6Q7L0X2 663 aa17.49■□□□□ 0.39
SAFB2-205ENST00000590000 ADGRA1Q86SQ6 560 aa17.49■□□□□ 0.39
SAFB2-205ENST00000590000 OSBPL5Q9H0X9 879 aaPredicted RBP17.49■□□□□ 0.39
SAFB2-205ENST00000590000 ARID4AP29374 1257 aaPredicted RBP17.48■□□□□ 0.39
SAFB2-205ENST00000590000 FAM110CQ1W6H9 321 aa17.48■□□□□ 0.39
SAFB2-205ENST00000590000 SPATA5Q8NB90 893 aa17.48■□□□□ 0.39
SAFB2-205ENST00000590000 SH3RF3Q8TEJ3 882 aaPredicted RBP17.48■□□□□ 0.39
SAFB2-205ENST00000590000 SMCR8Q8TEV9 937 aaPredicted RBP17.48■□□□□ 0.39
SAFB2-205ENST00000590000 LRCH3Q96II8 777 aa17.48■□□□□ 0.39
SAFB2-205ENST00000590000 PAWRQ96IZ0 340 aaKnown RBP17.48■□□□□ 0.39
SAFB2-205ENST00000590000 NEUROD6Q96NK8 337 aa17.48■□□□□ 0.39
SAFB2-205ENST00000590000 ASCC2Q9H1I8 757 aaPredicted RBP17.48■□□□□ 0.39
SAFB2-205ENST00000590000 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.48■□□□□ 0.39
SAFB2-205ENST00000590000 DDX60LQ5H9U9 1706 aaKnown RBP17.47■□□□□ 0.39
SAFB2-205ENST00000590000 CAP2P40123 477 aa17.47■□□□□ 0.39
SAFB2-205ENST00000590000 MVPQ14764 893 aaKnown RBP17.47■□□□□ 0.39
SAFB2-205ENST00000590000 ARHGAP45Q92619 1136 aa17.47■□□□□ 0.39
SAFB2-205ENST00000590000 CLUAP1Q96AJ1 413 aa17.47■□□□□ 0.39
SAFB2-205ENST00000590000 HTATIP2Q9BUP3 242 aa17.47■□□□□ 0.39
SAFB2-205ENST00000590000 STAP2Q9UGK3 403 aa17.47■□□□□ 0.39
SAFB2-205ENST00000590000 TAOK2Q9UL54 1235 aa17.47■□□□□ 0.39
SAFB2-205ENST00000590000 MAST2Q6P0Q8 1798 aa17.47■□□□□ 0.39
SAFB2-205ENST00000590000 IPO8O15397 1037 aaKnown RBP17.46■□□□□ 0.39
SAFB2-205ENST00000590000 TRIM27P14373 513 aa17.46■□□□□ 0.39
SAFB2-205ENST00000590000 SH3D19Q5HYK7 790 aa17.46■□□□□ 0.39
SAFB2-205ENST00000590000 SPTY2D1Q68D10 685 aaPredicted RBP17.46■□□□□ 0.39
SAFB2-205ENST00000590000 PROCA1Q8NCQ7 364 aaPredicted RBP17.46■□□□□ 0.39
SAFB2-205ENST00000590000 ZNF280CQ8ND82 737 aa17.46■□□□□ 0.39
SAFB2-205ENST00000590000 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.46■□□□□ 0.39
SAFB2-205ENST00000590000 TXNRD2Q9NNW7 524 aa17.46■□□□□ 0.39
SAFB2-205ENST00000590000 SNRKQ9NRH2 765 aa17.46■□□□□ 0.39
SAFB2-205ENST00000590000 TFRCP02786 760 aaKnown RBP17.45■□□□□ 0.38
SAFB2-205ENST00000590000 TRIB2Q92519 343 aa17.45■□□□□ 0.38
SAFB2-205ENST00000590000 ATF7IPQ6VMQ6 1270 aa17.44■□□□□ 0.38
SAFB2-205ENST00000590000 SLF2Q8IX21 1173 aa17.44■□□□□ 0.38
SAFB2-205ENST00000590000 TEX11Q8IYF3 940 aa17.44■□□□□ 0.38
SAFB2-205ENST00000590000 RAI14Q9P0K7 980 aa17.44■□□□□ 0.38
SAFB2-205ENST00000590000 AKAP2Q9Y2D5 859 aa17.44■□□□□ 0.38
SAFB2-205ENST00000590000 METTL16Q86W50 562 aaKnown RBP17.43■□□□□ 0.38
SAFB2-205ENST00000590000 P2RX7Q99572 595 aaKnown RBP17.43■□□□□ 0.38
SAFB2-205ENST00000590000 GDF15Q99988 308 aa17.43■□□□□ 0.38
SAFB2-205ENST00000590000 DBNDD2Q9BQY9 259 aa17.43■□□□□ 0.38
SAFB2-205ENST00000590000 AATFQ9NY61 560 aaKnown RBP eCLIP17.43■□□□□ 0.38
SAFB2-205ENST00000590000 MORF4L1Q9UBU8 362 aa17.43■□□□□ 0.38
SAFB2-205ENST00000590000 USP17L5A8MUK1 530 aa17.42■□□□□ 0.38
SAFB2-205ENST00000590000 EVI5O60447 810 aa17.42■□□□□ 0.38
SAFB2-205ENST00000590000 CYP2E1P05181 493 aaPredicted RBP17.42■□□□□ 0.38
SAFB2-205ENST00000590000 GNAI3P08754 354 aa17.42■□□□□ 0.38
SAFB2-205ENST00000590000 MTMR2Q13614 643 aa17.42■□□□□ 0.38
SAFB2-205ENST00000590000 Q3C1V9 767 aa17.42■□□□□ 0.38
SAFB2-205ENST00000590000 MAP3K21Q5TCX8 1036 aa17.42■□□□□ 0.38
SAFB2-205ENST00000590000 ZKSCAN2Q63HK3 967 aa17.42■□□□□ 0.38
SAFB2-205ENST00000590000 COA7Q96BR5 231 aa17.42■□□□□ 0.38
SAFB2-205ENST00000590000 ZMYND8Q9ULU4 1186 aaPredicted RBP17.42■□□□□ 0.38
SAFB2-205ENST00000590000 NR2E3Q9Y5X4 410 aa17.42■□□□□ 0.38
SAFB2-205ENST00000590000 A0A0C4DFX4 3053 aa17.41■□□□□ 0.38
SAFB2-205ENST00000590000 CUL9Q8IWT3 2517 aa17.41■□□□□ 0.38
SAFB2-205ENST00000590000 GDF11O95390 407 aa17.41■□□□□ 0.38
SAFB2-205ENST00000590000 HMGCRP04035 888 aa17.41■□□□□ 0.38
SAFB2-205ENST00000590000 DYNLL1P63167 89 aaKnown RBP17.41■□□□□ 0.38
SAFB2-205ENST00000590000 MAPKAPK5Q8IW41 473 aa17.41■□□□□ 0.38
SAFB2-205ENST00000590000 WDR18Q9BV38 432 aa17.41■□□□□ 0.38
SAFB2-205ENST00000590000 PORCNQ9H237 461 aa17.41■□□□□ 0.38
SAFB2-205ENST00000590000 PIH1D3Q9NQM4 214 aaKnown RBP17.41■□□□□ 0.38
SAFB2-205ENST00000590000 TLR7Q9NYK1 1049 aaKnown RBP17.41■□□□□ 0.38
SAFB2-205ENST00000590000 RBPJLQ9UBG7 517 aa17.41■□□□□ 0.38
SAFB2-205ENST00000590000 PFASO15067 1338 aa17.41■□□□□ 0.38
SAFB2-205ENST00000590000 FLT1P17948 1338 aa17.41■□□□□ 0.38
SAFB2-205ENST00000590000 FRMPD3Q5JV73 1810 aa17.4■□□□□ 0.38
SAFB2-205ENST00000590000 LDHCP07864 332 aa17.4■□□□□ 0.38
SAFB2-205ENST00000590000 CYP2B6P20813 491 aa17.4■□□□□ 0.38
SAFB2-205ENST00000590000 GCLCP48506 637 aaPredicted RBP17.4■□□□□ 0.38
SAFB2-205ENST00000590000 PPP4CP60510 307 aa17.4■□□□□ 0.38
SAFB2-205ENST00000590000 POLA2Q14181 598 aa17.4■□□□□ 0.38
SAFB2-205ENST00000590000 CCL14Q16627 93 aa17.4■□□□□ 0.38
SAFB2-205ENST00000590000 TMEM57Q8N5G2 664 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms