RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 CRISPLD2Q9H0B8 497 aa18.84■□□□□ 0.61
ACTN4-211ENST00000589528 COPRSQ9NQ92 184 aa18.84■□□□□ 0.61
ACTN4-211ENST00000589528 COL6A3P12111 3177 aa18.83■□□□□ 0.61
ACTN4-211ENST00000589528 GPR75-ASB3A0A0A6YYF3 556 aa18.83■□□□□ 0.6
ACTN4-211ENST00000589528 A0A1B0GUL7 405 aa18.83■□□□□ 0.6
ACTN4-211ENST00000589528 DLL1O00548 723 aa18.83■□□□□ 0.6
ACTN4-211ENST00000589528 ZBTB22O15209 634 aa18.83■□□□□ 0.6
ACTN4-211ENST00000589528 LDHCP07864 332 aa18.83■□□□□ 0.6
ACTN4-211ENST00000589528 HMGCS2P54868 508 aa18.83■□□□□ 0.6
ACTN4-211ENST00000589528 GORABQ5T7V8 394 aa18.83■□□□□ 0.6
ACTN4-211ENST00000589528 ZNF280CQ8ND82 737 aa18.83■□□□□ 0.6
ACTN4-211ENST00000589528 DIS3LQ8TF46 1054 aaKnown RBP18.83■□□□□ 0.6
ACTN4-211ENST00000589528 XAGE2Q96GT9 111 aa18.83■□□□□ 0.6
ACTN4-211ENST00000589528 LRCH3Q96II8 777 aa18.83■□□□□ 0.6
ACTN4-211ENST00000589528 HMX1Q9NP08 348 aaPredicted RBP18.83■□□□□ 0.6
ACTN4-211ENST00000589528 SOX1O00570 391 aaPredicted RBP18.82■□□□□ 0.6
ACTN4-211ENST00000589528 SLFN5Q08AF3 891 aa18.82■□□□□ 0.6
ACTN4-211ENST00000589528 ANKLE1Q8NAG6 615 aa18.82■□□□□ 0.6
ACTN4-211ENST00000589528 NEUROD6Q96NK8 337 aa18.82■□□□□ 0.6
ACTN4-211ENST00000589528 API5Q9BZZ5 524 aaKnown RBP18.82■□□□□ 0.6
ACTN4-211ENST00000589528 AS3MTQ9HBK9 375 aa18.82■□□□□ 0.6
ACTN4-211ENST00000589528 NOB1Q9ULX3 412 aaKnown RBP18.82■□□□□ 0.6
ACTN4-211ENST00000589528 RPTORQ8N122 1335 aa18.81■□□□□ 0.6
ACTN4-211ENST00000589528 DDX60LQ5H9U9 1706 aaKnown RBP18.81■□□□□ 0.6
ACTN4-211ENST00000589528 ZNF316A6NFI3 1004 aaPredicted RBP18.81■□□□□ 0.6
ACTN4-211ENST00000589528 RHBDL3P58872 404 aa18.81■□□□□ 0.6
ACTN4-211ENST00000589528 NOL10Q9BSC4 688 aaKnown RBP18.81■□□□□ 0.6
ACTN4-211ENST00000589528 RAI14Q9P0K7 980 aa18.81■□□□□ 0.6
ACTN4-211ENST00000589528 USP17L5A8MUK1 530 aa18.8■□□□□ 0.6
ACTN4-211ENST00000589528 SRGAP3O43295 1099 aa18.8■□□□□ 0.6
ACTN4-211ENST00000589528 NPM3O75607 178 aaKnown RBP18.8■□□□□ 0.6
ACTN4-211ENST00000589528 MAP4K4O95819 1239 aaPredicted RBP18.8■□□□□ 0.6
ACTN4-211ENST00000589528 IRX3P78415 501 aaPredicted RBP18.8■□□□□ 0.6
ACTN4-211ENST00000589528 TFCP2Q12800 502 aa18.8■□□□□ 0.6
ACTN4-211ENST00000589528 NBPF3Q9H094 633 aa18.8■□□□□ 0.6
ACTN4-211ENST00000589528 ASCC2Q9H1I8 757 aaPredicted RBP18.8■□□□□ 0.6
ACTN4-211ENST00000589528 ZMYND8Q9ULU4 1186 aaPredicted RBP18.8■□□□□ 0.6
ACTN4-211ENST00000589528 CAP2P40123 477 aa18.79■□□□□ 0.6
ACTN4-211ENST00000589528 TEX11Q8IYF3 940 aa18.79■□□□□ 0.6
ACTN4-211ENST00000589528 MEIS3Q99687 375 aa18.79■□□□□ 0.6
ACTN4-211ENST00000589528 TRIM34Q9BYJ4 488 aa18.79■□□□□ 0.6
ACTN4-211ENST00000589528 C11orf49Q9H6J7 331 aa18.79■□□□□ 0.6
ACTN4-211ENST00000589528 TMOD4Q9NZQ9 345 aa18.79■□□□□ 0.6
ACTN4-211ENST00000589528 COL2A1P02458 1487 aaPredicted RBP18.78■□□□□ 0.6
ACTN4-211ENST00000589528 SPATA5Q8NB90 893 aa18.78■□□□□ 0.6
ACTN4-211ENST00000589528 NSUN4Q96CB9 384 aaKnown RBP18.78■□□□□ 0.6
ACTN4-211ENST00000589528 HERC5Q9UII4 1024 aaKnown RBP18.78■□□□□ 0.6
ACTN4-211ENST00000589528 PLXNB2O15031 1838 aa18.77■□□□□ 0.6
ACTN4-211ENST00000589528 GNAI3P08754 354 aa18.77■□□□□ 0.6
ACTN4-211ENST00000589528 CT47B1P0C2W7 299 aaPredicted RBP18.77■□□□□ 0.6
ACTN4-211ENST00000589528 SYN1P17600 705 aa18.77■□□□□ 0.6
ACTN4-211ENST00000589528 BMP8BP34820 402 aa18.77■□□□□ 0.6
ACTN4-211ENST00000589528 TRIM32Q13049 653 aa18.77■□□□□ 0.6
ACTN4-211ENST00000589528 TBC1D9Q6ZT07 1266 aa18.77■□□□□ 0.6
ACTN4-211ENST00000589528 CCAR1Q8IX12 1150 aaKnown RBP18.77■□□□□ 0.6
ACTN4-211ENST00000589528 CDCA7LQ96GN5 454 aa18.77■□□□□ 0.6
ACTN4-211ENST00000589528 GDF15Q99988 308 aa18.77■□□□□ 0.6
ACTN4-211ENST00000589528 HMG20BQ9P0W2 317 aa18.77■□□□□ 0.6
ACTN4-211ENST00000589528 LRP2BPQ9P2M1 347 aa18.77■□□□□ 0.6
ACTN4-211ENST00000589528 CYP2B6P20813 491 aa18.76■□□□□ 0.59
ACTN4-211ENST00000589528 MTMR2Q13614 643 aa18.76■□□□□ 0.59
ACTN4-211ENST00000589528 PDE3AQ14432 1141 aa18.76■□□□□ 0.59
ACTN4-211ENST00000589528 SH3D19Q5HYK7 790 aa18.76■□□□□ 0.59
ACTN4-211ENST00000589528 PI16Q6UXB8 463 aa18.76■□□□□ 0.59
ACTN4-211ENST00000589528 ZNF384Q8TF68 577 aa18.76■□□□□ 0.59
ACTN4-211ENST00000589528 NUDT12Q9BQG2 462 aa18.76■□□□□ 0.59
ACTN4-211ENST00000589528 GJD2Q9UKL4 321 aa18.76■□□□□ 0.59
ACTN4-211ENST00000589528 DEFB123Q8N688 67 aa18.75■□□□□ 0.59
ACTN4-211ENST00000589528 SOCS4Q8WXH5 440 aa18.75■□□□□ 0.59
ACTN4-211ENST00000589528 TRIB2Q92519 343 aa18.75■□□□□ 0.59
ACTN4-211ENST00000589528 DHX36Q9H2U1 1008 aaKnown RBP18.75■□□□□ 0.59
ACTN4-211ENST00000589528 CWC22Q9HCG8 908 aaKnown RBP18.75■□□□□ 0.59
ACTN4-211ENST00000589528 PI4KBQ9UBF8 816 aa18.75■□□□□ 0.59
ACTN4-211ENST00000589528 BAG3O95817 575 aa18.74■□□□□ 0.59
ACTN4-211ENST00000589528 ASNSP08243 561 aa18.74■□□□□ 0.59
ACTN4-211ENST00000589528 PRKAR2AP13861 404 aaKnown RBP18.74■□□□□ 0.59
ACTN4-211ENST00000589528 PLCG2P16885 1265 aa18.74■□□□□ 0.59
ACTN4-211ENST00000589528 ARID4AP29374 1257 aaPredicted RBP18.74■□□□□ 0.59
ACTN4-211ENST00000589528 GPR153Q6NV75 609 aa18.74■□□□□ 0.59
ACTN4-211ENST00000589528 CRACR2BQ8N4Y2 399 aaPredicted RBP18.74■□□□□ 0.59
ACTN4-211ENST00000589528 GPRC5AQ8NFJ5 357 aa18.74■□□□□ 0.59
ACTN4-211ENST00000589528 SH3RF3Q8TEJ3 882 aaPredicted RBP18.74■□□□□ 0.59
ACTN4-211ENST00000589528 MORF4L1Q9UBU8 362 aa18.74■□□□□ 0.59
ACTN4-211ENST00000589528 A0A0C4DFX4 3053 aa18.74■□□□□ 0.59
ACTN4-211ENST00000589528 CDK5RAP2Q96SN8 1893 aa18.73■□□□□ 0.59
ACTN4-211ENST00000589528 UQCRFS1P1P0C7P4 283 aa18.73■□□□□ 0.59
ACTN4-211ENST00000589528 ZKSCAN1P17029 563 aaPredicted RBP18.73■□□□□ 0.59
ACTN4-211ENST00000589528 MAGEA10P43363 369 aaPredicted RBP18.73■□□□□ 0.59
ACTN4-211ENST00000589528 BACE1P56817 501 aa18.73■□□□□ 0.59
ACTN4-211ENST00000589528 G3BP1Q13283 466 aaKnown RBP eCLIP18.73■□□□□ 0.593e-10■■□□□ 13.2
ACTN4-211ENST00000589528 NAA16Q6N069 864 aaPredicted RBP18.73■□□□□ 0.59
ACTN4-211ENST00000589528 TRMT44Q8IYL2 757 aaKnown RBP18.73■□□□□ 0.59
ACTN4-211ENST00000589528 TDHQ8IZJ6 230 aa18.73■□□□□ 0.59
ACTN4-211ENST00000589528 WDR18Q9BV38 432 aa18.73■□□□□ 0.59
ACTN4-211ENST00000589528 UBE2OQ9C0C9 1292 aaKnown RBP18.73■□□□□ 0.59
ACTN4-211ENST00000589528 OGDHLQ9ULD0 1010 aa18.73■□□□□ 0.59
ACTN4-211ENST00000589528 MAST2Q6P0Q8 1798 aa18.73■□□□□ 0.59
ACTN4-211ENST00000589528 SIPA1L1O43166 1804 aa18.72■□□□□ 0.59
ACTN4-211ENST00000589528 FOCADQ5VW36 1801 aa18.72■□□□□ 0.59
ACTN4-211ENST00000589528 C19orf81C9J6K1 198 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms