RNA–Protein interactions for RNA: ENST00000589201.1

LINC00654-202, long intergenic non-protein coding RNA 654, humanhuman

TSL 3 BASIC

Gene LINC00654, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-202ENST00000589201 CTNND1O60716 968 aaKnown RBP24.03■■□□□ 1.44
LINC00654-202ENST00000589201 ALDH1A1P00352 501 aa24.03■■□□□ 1.44
LINC00654-202ENST00000589201 CCL15Q16663 113 aa24.03■■□□□ 1.44
LINC00654-202ENST00000589201 PI4K2BQ8TCG2 481 aa24.03■■□□□ 1.44
LINC00654-202ENST00000589201 PICK1Q9NRD5 415 aa24.03■■□□□ 1.44
LINC00654-202ENST00000589201 SNAPC2Q13487 334 aa24.02■■□□□ 1.44
LINC00654-202ENST00000589201 SLC4A8Q2Y0W8 1093 aa24.02■■□□□ 1.44
LINC00654-202ENST00000589201 OTUD7BQ6GQQ9 843 aa24.02■■□□□ 1.44
LINC00654-202ENST00000589201 FOXP4Q8IVH2 680 aaPredicted RBP24.02■■□□□ 1.44
LINC00654-202ENST00000589201 LCORLQ8N3X6 602 aa24.02■■□□□ 1.44
LINC00654-202ENST00000589201 HERC5Q9UII4 1024 aaKnown RBP24.02■■□□□ 1.44
LINC00654-202ENST00000589201 SALL3Q9BXA9 1300 aa24.02■■□□□ 1.44
LINC00654-202ENST00000589201 ERC2O15083 957 aa24.01■■□□□ 1.43
LINC00654-202ENST00000589201 PTPRAP18433 802 aa24.01■■□□□ 1.43
LINC00654-202ENST00000589201 MX1P20591 662 aa24.01■■□□□ 1.43
LINC00654-202ENST00000589201 RRP1BQ14684 758 aaKnown RBP24.01■■□□□ 1.43
LINC00654-202ENST00000589201 UBE3CQ15386 1083 aa24.01■■□□□ 1.43
LINC00654-202ENST00000589201 ZSCAN25Q6NSZ9 544 aa24.01■■□□□ 1.43
LINC00654-202ENST00000589201 METTL16Q86W50 562 aaKnown RBP24.01■■□□□ 1.43
LINC00654-202ENST00000589201 SMC5Q8IY18 1101 aa24.01■■□□□ 1.43
LINC00654-202ENST00000589201 KBTBD3Q8NAB2 608 aa24.01■■□□□ 1.43
LINC00654-202ENST00000589201 CFHR5Q9BXR6 569 aa24.01■■□□□ 1.43
LINC00654-202ENST00000589201 CRNKL1Q9BZJ0 848 aaKnown RBP24.01■■□□□ 1.43
LINC00654-202ENST00000589201 ARMT1Q9H993 441 aa24.01■■□□□ 1.43
LINC00654-202ENST00000589201 SIPA1L1O43166 1804 aa24■■□□□ 1.43
LINC00654-202ENST00000589201 GLRX3O76003 335 aaKnown RBP24■■□□□ 1.43
LINC00654-202ENST00000589201 CETPP11597 493 aa24■■□□□ 1.43
LINC00654-202ENST00000589201 B4GALNT3Q6L9W6 998 aa24■■□□□ 1.43
LINC00654-202ENST00000589201 FRMD4AQ9P2Q2 1039 aaPredicted RBP24■■□□□ 1.43
LINC00654-202ENST00000589201 ZHX2Q9Y6X8 837 aa24■■□□□ 1.43
LINC00654-202ENST00000589201 MYH1P12882 1939 aa24■■□□□ 1.43
LINC00654-202ENST00000589201 FAM43AQ8N2R8 423 aa23.99■■□□□ 1.43
LINC00654-202ENST00000589201 CRACR2BQ8N4Y2 399 aaPredicted RBP23.99■■□□□ 1.43
LINC00654-202ENST00000589201 DNAJC18Q9H819 358 aa23.99■■□□□ 1.43
LINC00654-202ENST00000589201 KCNH4Q9UQ05 1017 aa23.99■■□□□ 1.43
LINC00654-202ENST00000589201 MYH7P12883 1935 aa23.99■■□□□ 1.43
LINC00654-202ENST00000589201 GPR25O00155 361 aa23.98■■□□□ 1.43
LINC00654-202ENST00000589201 MBD4O95243 580 aa23.98■■□□□ 1.43
LINC00654-202ENST00000589201 HLA-DOAP06340 250 aa23.98■■□□□ 1.43
LINC00654-202ENST00000589201 CAP2P40123 477 aa23.98■■□□□ 1.43
LINC00654-202ENST00000589201 SDR42E1Q8WUS8 393 aa23.98■■□□□ 1.43
LINC00654-202ENST00000589201 LNPKQ9C0E8 428 aa23.98■■□□□ 1.43
LINC00654-202ENST00000589201 PRKAB2O43741 272 aa23.97■■□□□ 1.43
LINC00654-202ENST00000589201 CRHR2Q13324 411 aa23.97■■□□□ 1.43
LINC00654-202ENST00000589201 CCDC84Q86UT8 332 aaPredicted RBP23.97■■□□□ 1.43
LINC00654-202ENST00000589201 ZNF296Q8WUU4 475 aaPredicted RBP23.97■■□□□ 1.43
LINC00654-202ENST00000589201 TRIM34Q9BYJ4 488 aa23.97■■□□□ 1.43
LINC00654-202ENST00000589201 PUS7LQ9H0K6 701 aaKnown RBP23.97■■□□□ 1.43
LINC00654-202ENST00000589201 STAP2Q9UGK3 403 aa23.97■■□□□ 1.43
LINC00654-202ENST00000589201 AFG3L2Q9Y4W6 797 aa23.97■■□□□ 1.43
LINC00654-202ENST00000589201 DOCK1Q14185 1865 aa23.96■■□□□ 1.43
LINC00654-202ENST00000589201 BTBD19C9JJ37 291 aa23.96■■□□□ 1.43
LINC00654-202ENST00000589201 CXCL11O14625 94 aa23.96■■□□□ 1.43
LINC00654-202ENST00000589201 NOM1Q5C9Z4 860 aaKnown RBP23.96■■□□□ 1.43
LINC00654-202ENST00000589201 TTC6Q86TZ1 520 aa23.96■■□□□ 1.43
LINC00654-202ENST00000589201 RNF113AO15541 343 aaKnown RBP23.95■■□□□ 1.42
LINC00654-202ENST00000589201 POLR3DP05423 398 aaPredicted RBP23.95■■□□□ 1.42
LINC00654-202ENST00000589201 PLCD1P51178 756 aa23.95■■□□□ 1.42
LINC00654-202ENST00000589201 PDE1AP54750 535 aa23.95■■□□□ 1.42
LINC00654-202ENST00000589201 MOGSQ13724 837 aa23.95■■□□□ 1.42
LINC00654-202ENST00000589201 DCP1AQ9NPI6 582 aaPredicted RBP23.95■■□□□ 1.42
LINC00654-202ENST00000589201 MCM9Q9NXL9 1143 aa23.95■■□□□ 1.42
LINC00654-202ENST00000589201 JAG1P78504 1218 aa23.94■■□□□ 1.42
LINC00654-202ENST00000589201 CHD1LQ86WJ1 897 aa23.94■■□□□ 1.42
LINC00654-202ENST00000589201 SERPINB13Q9UIV8 391 aa23.94■■□□□ 1.42
LINC00654-202ENST00000589201 ZFYP08048 801 aaPredicted RBP23.93■■□□□ 1.42
LINC00654-202ENST00000589201 NUCB1Q02818 461 aa23.93■■□□□ 1.42
LINC00654-202ENST00000589201 EVX2Q03828 476 aa23.93■■□□□ 1.42
LINC00654-202ENST00000589201 TAF1CQ15572 869 aaPredicted RBP23.93■■□□□ 1.42
LINC00654-202ENST00000589201 OSBP2Q969R2 916 aa23.93■■□□□ 1.42
LINC00654-202ENST00000589201 EHD4Q9H223 541 aa23.93■■□□□ 1.42
LINC00654-202ENST00000589201 ATP8A2Q9NTI2 1148 aa23.93■■□□□ 1.42
LINC00654-202ENST00000589201 PHIPQ8WWQ0 1821 aa23.93■■□□□ 1.42
LINC00654-202ENST00000589201 A0A0G2JLL6 359 aaPredicted RBP23.92■■□□□ 1.42
LINC00654-202ENST00000589201 TRIM75PA6NK02 468 aa23.92■■□□□ 1.42
LINC00654-202ENST00000589201 FKTNO75072 461 aa23.92■■□□□ 1.42
LINC00654-202ENST00000589201 GDF11O95390 407 aa23.92■■□□□ 1.42
LINC00654-202ENST00000589201 DGKZQ13574 1117 aa23.92■■□□□ 1.42
LINC00654-202ENST00000589201 SHROOM1Q2M3G4 852 aaPredicted RBP23.92■■□□□ 1.42
LINC00654-202ENST00000589201 IFFO2Q5TF58 517 aa23.92■■□□□ 1.42
LINC00654-202ENST00000589201 TATDN1Q6P1N9 297 aa23.92■■□□□ 1.42
LINC00654-202ENST00000589201 PRRT2Q7Z6L0 340 aaPredicted RBP23.92■■□□□ 1.42
LINC00654-202ENST00000589201 APPBP2Q92624 585 aa23.92■■□□□ 1.42
LINC00654-202ENST00000589201 ZFYVE28Q9HCC9 887 aa23.92■■□□□ 1.42
LINC00654-202ENST00000589201 ZCCHC17Q9NP64 241 aaKnown RBP23.92■■□□□ 1.42
LINC00654-202ENST00000589201 SLC4A4Q9Y6R1 1079 aa23.92■■□□□ 1.42
LINC00654-202ENST00000589201 NAV1Q8NEY1 1877 aa23.92■■□□□ 1.42
LINC00654-202ENST00000589201 ATAD5Q96QE3 1844 aa23.91■■□□□ 1.42
LINC00654-202ENST00000589201 USP17L5A8MUK1 530 aa23.91■■□□□ 1.42
LINC00654-202ENST00000589201 CYP2D6P10635 497 aa23.91■■□□□ 1.42
LINC00654-202ENST00000589201 SPP2Q13103 211 aa23.91■■□□□ 1.42
LINC00654-202ENST00000589201 ANKRD23Q86SG2 305 aa23.91■■□□□ 1.42
LINC00654-202ENST00000589201 STRBPQ96SI9 672 aaKnown RBP23.91■■□□□ 1.42
LINC00654-202ENST00000589201 FSD1Q9BTV5 496 aa23.91■■□□□ 1.42
LINC00654-202ENST00000589201 DDX60LQ5H9U9 1706 aaKnown RBP23.9■■□□□ 1.42
LINC00654-202ENST00000589201 ASNSP08243 561 aa23.9■■□□□ 1.42
LINC00654-202ENST00000589201 LRRFIP1Q32MZ4 808 aaKnown RBP23.9■■□□□ 1.42
LINC00654-202ENST00000589201 GPAT2Q6NUI2 795 aa23.9■■□□□ 1.42
LINC00654-202ENST00000589201 ZNF280CQ8ND82 737 aa23.9■■□□□ 1.42
LINC00654-202ENST00000589201 MCOLN1Q9GZU1 580 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms