RNA–Protein interactions for RNA: ENST00000589174.1

MRPL54-202, Transcript of mitochondrial ribosomal protein L54, humanhuman

TSL 3

Gene MRPL54, Length 491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-202ENST00000589174 PICK1Q9NRD5 415 aa13.63□□□□□ -0.23
MRPL54-202ENST00000589174 SNRKQ9NRH2 765 aa13.63□□□□□ -0.23
MRPL54-202ENST00000589174 AGTPBP1Q9UPW5 1226 aa13.63□□□□□ -0.23
MRPL54-202ENST00000589174 SLC45A1Q9Y2W3 748 aa13.63□□□□□ -0.23
MRPL54-202ENST00000589174 MYH1P12882 1939 aa13.62□□□□□ -0.23
MRPL54-202ENST00000589174 DDX60LQ5H9U9 1706 aaKnown RBP13.62□□□□□ -0.23
MRPL54-202ENST00000589174 CCER2I3L3R5 266 aa13.62□□□□□ -0.23
MRPL54-202ENST00000589174 FCGRTP55899 365 aa13.62□□□□□ -0.23
MRPL54-202ENST00000589174 TRIM32Q13049 653 aa13.62□□□□□ -0.23
MRPL54-202ENST00000589174 FASTKD5Q7L8L6 764 aaKnown RBP13.62□□□□□ -0.23
MRPL54-202ENST00000589174 ANKRD13CQ8N6S4 541 aa13.62□□□□□ -0.23
MRPL54-202ENST00000589174 U2AF1L4Q8WU68 220 aaKnown RBP13.62□□□□□ -0.23
MRPL54-202ENST00000589174 RNF208Q9H0X6 261 aa13.62□□□□□ -0.23
MRPL54-202ENST00000589174 C1orf115Q9H7X2 142 aa13.62□□□□□ -0.23
MRPL54-202ENST00000589174 TLR7Q9NYK1 1049 aaKnown RBP13.62□□□□□ -0.23
MRPL54-202ENST00000589174 RBM27Q9P2N5 1060 aaKnown RBP13.62□□□□□ -0.23
MRPL54-202ENST00000589174 AKAP2Q9Y2D5 859 aa13.62□□□□□ -0.23
MRPL54-202ENST00000589174 ADCY3O60266 1144 aa13.61□□□□□ -0.23
MRPL54-202ENST00000589174 GNAI2P04899 355 aa13.61□□□□□ -0.23
MRPL54-202ENST00000589174 INHAP05111 366 aa13.61□□□□□ -0.23
MRPL54-202ENST00000589174 CYP2E1P05181 493 aaPredicted RBP13.61□□□□□ -0.23
MRPL54-202ENST00000589174 CAP2P40123 477 aa13.61□□□□□ -0.23
MRPL54-202ENST00000589174 SPP2Q13103 211 aa13.61□□□□□ -0.23
MRPL54-202ENST00000589174 SPTY2D1Q68D10 685 aaPredicted RBP13.61□□□□□ -0.23
MRPL54-202ENST00000589174 CHRDL2Q6WN34 429 aa13.61□□□□□ -0.23
MRPL54-202ENST00000589174 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.61□□□□□ -0.23
MRPL54-202ENST00000589174 PIH1D3Q9NQM4 214 aaKnown RBP13.61□□□□□ -0.23
MRPL54-202ENST00000589174 GJD2Q9UKL4 321 aa13.61□□□□□ -0.23
MRPL54-202ENST00000589174 LAMA3Q16787 3333 aa13.61□□□□□ -0.23
MRPL54-202ENST00000589174 HOXD10P28358 340 aa13.6□□□□□ -0.23
MRPL54-202ENST00000589174 MNX1P50219 401 aaPredicted RBP13.6□□□□□ -0.23
MRPL54-202ENST00000589174 HMGCS2P54868 508 aa13.6□□□□□ -0.23
MRPL54-202ENST00000589174 IRF5Q13568 498 aa13.6□□□□□ -0.23
MRPL54-202ENST00000589174 TNNI3KQ59H18 835 aa13.6□□□□□ -0.23
MRPL54-202ENST00000589174 SLAIN1Q8ND83 568 aa13.6□□□□□ -0.23
MRPL54-202ENST00000589174 SSH3Q8TE77 659 aa13.6□□□□□ -0.23
MRPL54-202ENST00000589174 DIS3LQ8TF46 1054 aaKnown RBP13.6□□□□□ -0.23
MRPL54-202ENST00000589174 FRAT1Q92837 279 aaPredicted RBP13.6□□□□□ -0.23
MRPL54-202ENST00000589174 PAK6Q9NQU5 681 aaPredicted RBP13.6□□□□□ -0.23
MRPL54-202ENST00000589174 AATFQ9NY61 560 aaKnown RBP eCLIP13.6□□□□□ -0.23
MRPL54-202ENST00000589174 RAI14Q9P0K7 980 aa13.6□□□□□ -0.23
MRPL54-202ENST00000589174 NDUFB9Q9Y6M9 179 aa13.6□□□□□ -0.23
MRPL54-202ENST00000589174 FPGT-TNNI3KV9GXZ4 949 aa13.6□□□□□ -0.23
MRPL54-202ENST00000589174 SGPL1O95470 568 aa13.59□□□□□ -0.23
MRPL54-202ENST00000589174 FAM110CQ1W6H9 321 aa13.59□□□□□ -0.23
MRPL54-202ENST00000589174 SH3D19Q5HYK7 790 aa13.59□□□□□ -0.23
MRPL54-202ENST00000589174 METTL16Q86W50 562 aaKnown RBP13.59□□□□□ -0.23
MRPL54-202ENST00000589174 TEX11Q8IYF3 940 aa13.59□□□□□ -0.23
MRPL54-202ENST00000589174 CRISPLD2Q9H0B8 497 aa13.59□□□□□ -0.23
MRPL54-202ENST00000589174 ASCC2Q9H1I8 757 aaPredicted RBP13.59□□□□□ -0.23
MRPL54-202ENST00000589174 TXNRD2Q9NNW7 524 aa13.59□□□□□ -0.23
MRPL54-202ENST00000589174 DBNLQ9UJU6 430 aaKnown RBP13.59□□□□□ -0.23
MRPL54-202ENST00000589174 FRMPD3Q5JV73 1810 aa13.59□□□□□ -0.23
MRPL54-202ENST00000589174 TNPO2O14787 897 aaKnown RBP13.58□□□□□ -0.24
MRPL54-202ENST00000589174 ZAP70P43403 619 aa13.58□□□□□ -0.24
MRPL54-202ENST00000589174 PPP4CP60510 307 aa13.58□□□□□ -0.24
MRPL54-202ENST00000589174 DYNLL1P63167 89 aaKnown RBP13.58□□□□□ -0.24
MRPL54-202ENST00000589174 ATP8B2P98198 1209 aa13.58□□□□□ -0.24
MRPL54-202ENST00000589174 EVX2Q03828 476 aa13.58□□□□□ -0.24
MRPL54-202ENST00000589174 MAPKAPK5Q8IW41 473 aa13.58□□□□□ -0.24
MRPL54-202ENST00000589174 SLF2Q8IX21 1173 aa13.58□□□□□ -0.24
MRPL54-202ENST00000589174 PROCA1Q8NCQ7 364 aaPredicted RBP13.58□□□□□ -0.24
MRPL54-202ENST00000589174 ZNF280CQ8ND82 737 aa13.58□□□□□ -0.24
MRPL54-202ENST00000589174 PXYLP1Q8TE99 480 aa13.58□□□□□ -0.24
MRPL54-202ENST00000589174 HDAC5Q9UQL6 1122 aa13.58□□□□□ -0.24
MRPL54-202ENST00000589174 FLT1P17948 1338 aa13.58□□□□□ -0.24
MRPL54-202ENST00000589174 ZBTB7BO15156 539 aaPredicted RBP13.57□□□□□ -0.24
MRPL54-202ENST00000589174 FARP2O94887 1054 aaPredicted RBP13.57□□□□□ -0.24
MRPL54-202ENST00000589174 G3BP1Q13283 466 aaKnown RBP eCLIP13.57□□□□□ -0.24
MRPL54-202ENST00000589174 SMCR8Q8TEV9 937 aaPredicted RBP13.57□□□□□ -0.24
MRPL54-202ENST00000589174 TGFBRAP1Q8WUH2 860 aa13.57□□□□□ -0.24
MRPL54-202ENST00000589174 EAF2Q96CJ1 260 aaPredicted RBP13.57□□□□□ -0.24
MRPL54-202ENST00000589174 DEFB118Q96PH6 123 aa13.57□□□□□ -0.24
MRPL54-202ENST00000589174 ANTXR1Q9H6X2 564 aa13.57□□□□□ -0.24
MRPL54-202ENST00000589174 GPR108Q9NPR9 543 aa13.57□□□□□ -0.24
MRPL54-202ENST00000589174 BIN2Q9UBW5 565 aaPredicted RBP13.57□□□□□ -0.24
MRPL54-202ENST00000589174 PALD1Q9ULE6 856 aa13.57□□□□□ -0.24
MRPL54-202ENST00000589174 RLFQ13129 1914 aa13.56□□□□□ -0.24
MRPL54-202ENST00000589174 USP17L5A8MUK1 530 aa13.56□□□□□ -0.24
MRPL54-202ENST00000589174 SOX1O00570 391 aaPredicted RBP13.56□□□□□ -0.24
MRPL54-202ENST00000589174 GDF11O95390 407 aa13.56□□□□□ -0.24
MRPL54-202ENST00000589174 LDHCP07864 332 aa13.56□□□□□ -0.24
MRPL54-202ENST00000589174 UQCRFS1P1P0C7P4 283 aa13.56□□□□□ -0.24
MRPL54-202ENST00000589174 UBXN2AP68543 259 aa13.56□□□□□ -0.24
MRPL54-202ENST00000589174 MTMR2Q13614 643 aa13.56□□□□□ -0.24
MRPL54-202ENST00000589174 Q3C1V9 767 aa13.56□□□□□ -0.24
MRPL54-202ENST00000589174 DPF3Q92784 378 aa13.56□□□□□ -0.24
MRPL54-202ENST00000589174 WDR18Q9BV38 432 aa13.56□□□□□ -0.24
MRPL54-202ENST00000589174 LRP2BPQ9P2M1 347 aa13.56□□□□□ -0.24
MRPL54-202ENST00000589174 NOP58Q9Y2X3 529 aaKnown RBP13.56□□□□□ -0.24
MRPL54-202ENST00000589174 MAP4K4O95819 1239 aaPredicted RBP13.55□□□□□ -0.24
MRPL54-202ENST00000589174 GSTO1P78417 241 aa13.55□□□□□ -0.24
MRPL54-202ENST00000589174 GORABQ5T7V8 394 aa13.55□□□□□ -0.24
MRPL54-202ENST00000589174 NAA16Q6N069 864 aaPredicted RBP13.55□□□□□ -0.24
MRPL54-202ENST00000589174 NKX2-3Q8TAU0 364 aa13.55□□□□□ -0.24
MRPL54-202ENST00000589174 TRIB2Q92519 343 aa13.55□□□□□ -0.24
MRPL54-202ENST00000589174 P2RX7Q99572 595 aaKnown RBP13.55□□□□□ -0.24
MRPL54-202ENST00000589174 CCDC8Q9H0W5 538 aaPredicted RBP13.55□□□□□ -0.24
MRPL54-202ENST00000589174 MORF4L1Q9UBU8 362 aa13.55□□□□□ -0.24
MRPL54-202ENST00000589174 SAP30BPQ9UHR5 308 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms