RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 ATRNL1Q5VV63 1379 aa14.08□□□□□ -0.16
RFX1-204ENST00000588885 SMARCA5O60264 1052 aaPredicted RBP14.07□□□□□ -0.16
RFX1-204ENST00000588885 RAB11FIP3O75154 756 aa14.07□□□□□ -0.16
RFX1-204ENST00000588885 ECM2O94769 699 aaPredicted RBP14.07□□□□□ -0.16
RFX1-204ENST00000588885 SLC4A8Q2Y0W8 1093 aa14.07□□□□□ -0.16
RFX1-204ENST00000588885 NOM1Q5C9Z4 860 aaKnown RBP14.07□□□□□ -0.16
RFX1-204ENST00000588885 NOL9Q5SY16 702 aaKnown RBP14.07□□□□□ -0.16
RFX1-204ENST00000588885 CCDC84Q86UT8 332 aaPredicted RBP14.07□□□□□ -0.16
RFX1-204ENST00000588885 SCYL3Q8IZE3 742 aa14.07□□□□□ -0.16
RFX1-204ENST00000588885 CD99L2Q8TCZ2 262 aa14.07□□□□□ -0.16
RFX1-204ENST00000588885 DNAJC2Q99543 621 aaKnown RBP14.07□□□□□ -0.16
RFX1-204ENST00000588885 OSBPL5Q9H0X9 879 aaPredicted RBP14.07□□□□□ -0.16
RFX1-204ENST00000588885 SAP30BPQ9UHR5 308 aaKnown RBP14.07□□□□□ -0.16
RFX1-204ENST00000588885 TRIM17Q9Y577 477 aa14.07□□□□□ -0.16
RFX1-204ENST00000588885 MAP4K4O95819 1239 aaPredicted RBP14.06□□□□□ -0.16
RFX1-204ENST00000588885 PTPRAP18433 802 aa14.06□□□□□ -0.16
RFX1-204ENST00000588885 PPP4CP60510 307 aa14.06□□□□□ -0.16
RFX1-204ENST00000588885 SP3Q02447 781 aa14.06□□□□□ -0.16
RFX1-204ENST00000588885 MAP3K10Q02779 954 aa14.06□□□□□ -0.16
RFX1-204ENST00000588885 PDHXO00330 501 aa14.05□□□□□ -0.16
RFX1-204ENST00000588885 GOLIM4O00461 696 aa14.05□□□□□ -0.16
RFX1-204ENST00000588885 PLCG2P16885 1265 aa14.05□□□□□ -0.16
RFX1-204ENST00000588885 CAP1Q01518 475 aa14.05□□□□□ -0.16
RFX1-204ENST00000588885 MAP3K12Q12852 859 aa14.05□□□□□ -0.16
RFX1-204ENST00000588885 ERICH6BQ5W0A0 696 aa14.05□□□□□ -0.16
RFX1-204ENST00000588885 FBXO46Q6PJ61 603 aaPredicted RBP14.05□□□□□ -0.16
RFX1-204ENST00000588885 EDC3Q96F86 508 aaKnown RBP14.05□□□□□ -0.16
RFX1-204ENST00000588885 PALD1Q9ULE6 856 aa14.05□□□□□ -0.16
RFX1-204ENST00000588885 KCNH4Q9UQ05 1017 aa14.05□□□□□ -0.16
RFX1-204ENST00000588885 TRIM75PA6NK02 468 aa14.04□□□□□ -0.16
RFX1-204ENST00000588885 TBC1D12O60347 775 aa14.04□□□□□ -0.16
RFX1-204ENST00000588885 CTNND1O60716 968 aaKnown RBP14.04□□□□□ -0.16
RFX1-204ENST00000588885 MOGSQ13724 837 aa14.04□□□□□ -0.16
RFX1-204ENST00000588885 RRP1BQ14684 758 aaKnown RBP14.04□□□□□ -0.16
RFX1-204ENST00000588885 OTOP1Q7RTM1 612 aa14.04□□□□□ -0.16
RFX1-204ENST00000588885 ERO1AQ96HE7 468 aa14.04□□□□□ -0.16
RFX1-204ENST00000588885 BOLA2Q9H3K6 86 aa14.04□□□□□ -0.16
RFX1-204ENST00000588885 DOCK2Q92608 1830 aa14.04□□□□□ -0.16
RFX1-204ENST00000588885 HTTP42858 3142 aa14.04□□□□□ -0.16
RFX1-204ENST00000588885 USP5P45974 858 aa14.03□□□□□ -0.16
RFX1-204ENST00000588885 SLC9C2Q5TAH2 1124 aa14.03□□□□□ -0.16
RFX1-204ENST00000588885 GADL1Q6ZQY3 521 aa14.03□□□□□ -0.16
RFX1-204ENST00000588885 LRRCC1Q9C099 1032 aa14.03□□□□□ -0.16
RFX1-204ENST00000588885 EFCC1Q9HA90 598 aa14.03□□□□□ -0.16
RFX1-204ENST00000588885 PI4KBQ9UBF8 816 aa14.03□□□□□ -0.16
RFX1-204ENST00000588885 CPA4Q9UI42 421 aa14.03□□□□□ -0.16
RFX1-204ENST00000588885 AFG3L2Q9Y4W6 797 aa14.03□□□□□ -0.16
RFX1-204ENST00000588885 FLT1P17948 1338 aa14.03□□□□□ -0.16
RFX1-204ENST00000588885 CENPFP49454 3210 aa14.02□□□□□ -0.16
RFX1-204ENST00000588885 CXCL11O14625 94 aa14.02□□□□□ -0.17
RFX1-204ENST00000588885 TLR2O60603 784 aa14.02□□□□□ -0.17
RFX1-204ENST00000588885 CYP2C8P10632 490 aa14.02□□□□□ -0.17
RFX1-204ENST00000588885 TTF1Q15361 905 aaPredicted RBP14.02□□□□□ -0.17
RFX1-204ENST00000588885 SLFNL1Q499Z3 407 aa14.02□□□□□ -0.17
RFX1-204ENST00000588885 GPAT2Q6NUI2 795 aa14.02□□□□□ -0.17
RFX1-204ENST00000588885 ANKRD23Q86SG2 305 aa14.02□□□□□ -0.17
RFX1-204ENST00000588885 CRACR2BQ8N4Y2 399 aaPredicted RBP14.02□□□□□ -0.17
RFX1-204ENST00000588885 TRIM34Q9BYJ4 488 aa14.02□□□□□ -0.17
RFX1-204ENST00000588885 ARHGAP39Q9C0H5 1083 aa14.02□□□□□ -0.17
RFX1-204ENST00000588885 DHX36Q9H2U1 1008 aaKnown RBP14.02□□□□□ -0.17
RFX1-204ENST00000588885 PDE6AP16499 860 aa14.01□□□□□ -0.17
RFX1-204ENST00000588885 CAP2P40123 477 aa14.01□□□□□ -0.17
RFX1-204ENST00000588885 JAG1P78504 1218 aa14.01□□□□□ -0.17
RFX1-204ENST00000588885 SPP2Q13103 211 aa14.01□□□□□ -0.17
RFX1-204ENST00000588885 SHROOM1Q2M3G4 852 aaPredicted RBP14.01□□□□□ -0.17
RFX1-204ENST00000588885 PPP4R2Q9NY27 417 aa14.01□□□□□ -0.17
RFX1-204ENST00000588885 PTPN22Q9Y2R2 807 aa14.01□□□□□ -0.17
RFX1-204ENST00000588885 PCDHB15Q9Y5E8 787 aa14.01□□□□□ -0.17
RFX1-204ENST00000588885 ZNF532Q9HCE3 1301 aa14□□□□□ -0.17
RFX1-204ENST00000588885 A0A0G2JLL6 359 aaPredicted RBP14□□□□□ -0.17
RFX1-204ENST00000588885 MAGEB6P1A0A0J9YX57 407 aa14□□□□□ -0.17
RFX1-204ENST00000588885 ATP5JP18859 108 aa14□□□□□ -0.17
RFX1-204ENST00000588885 ARHGEF6Q15052 776 aa14□□□□□ -0.17
RFX1-204ENST00000588885 FASTKD5Q7L8L6 764 aaKnown RBP14□□□□□ -0.17
RFX1-204ENST00000588885 PRRT2Q7Z6L0 340 aaPredicted RBP14□□□□□ -0.17
RFX1-204ENST00000588885 FOXP4Q8IVH2 680 aaPredicted RBP14□□□□□ -0.17
RFX1-204ENST00000588885 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14□□□□□ -0.17
RFX1-204ENST00000588885 DCTPP1Q9H773 170 aa14□□□□□ -0.17
RFX1-204ENST00000588885 DNAJC18Q9H819 358 aa14□□□□□ -0.17
RFX1-204ENST00000588885 ZCCHC17Q9NP64 241 aaKnown RBP14□□□□□ -0.17
RFX1-204ENST00000588885 PAG1Q9NWQ8 432 aa14□□□□□ -0.17
RFX1-204ENST00000588885 HERC5Q9UII4 1024 aaKnown RBP14□□□□□ -0.17
RFX1-204ENST00000588885 TNRC18O15417 2968 aaPredicted RBP14□□□□□ -0.17
RFX1-204ENST00000588885 IGSF3O75054 1194 aa13.99□□□□□ -0.17
RFX1-204ENST00000588885 GDF11O95390 407 aa13.99□□□□□ -0.17
RFX1-204ENST00000588885 CHGBP05060 677 aa13.99□□□□□ -0.17
RFX1-204ENST00000588885 HLA-DOAP06340 250 aa13.99□□□□□ -0.17
RFX1-204ENST00000588885 KIF22Q14807 665 aa13.99□□□□□ -0.17
RFX1-204ENST00000588885 TSHZ3Q63HK5 1081 aa13.99□□□□□ -0.17
RFX1-204ENST00000588885 B4GALNT3Q6L9W6 998 aa13.99□□□□□ -0.17
RFX1-204ENST00000588885 C17orf99Q6UX52 265 aa13.99□□□□□ -0.17
RFX1-204ENST00000588885 RIOK1Q9BRS2 568 aaKnown RBP13.99□□□□□ -0.17
RFX1-204ENST00000588885 KIAA0100Q14667 2235 aaKnown RBP13.98□□□□□ -0.17
RFX1-204ENST00000588885 USP17L5A8MUK1 530 aa13.98□□□□□ -0.17
RFX1-204ENST00000588885 HMGCS2P54868 508 aa13.98□□□□□ -0.17
RFX1-204ENST00000588885 LACTBP83111 547 aaPredicted RBP13.98□□□□□ -0.17
RFX1-204ENST00000588885 TREML2Q5T2D2 321 aa13.98□□□□□ -0.17
RFX1-204ENST00000588885 ZNF280CQ8ND82 737 aa13.98□□□□□ -0.17
RFX1-204ENST00000588885 PARK7Q99497 189 aaKnown RBP13.98□□□□□ -0.17
RFX1-204ENST00000588885 HAUS7Q99871 368 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms