RNA–Protein interactions for RNA: ENST00000588706.1

TUBD1-209, Transcript of tubulin delta 1, humanhuman

TSL 5

Gene TUBD1, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-209ENST00000588706 NR6A1Q15406 480 aa12.09□□□□□ -0.47
TUBD1-209ENST00000588706 CCDC73Q6ZRK6 1079 aa12.09□□□□□ -0.47
TUBD1-209ENST00000588706 RALYLQ86SE5 291 aaKnown RBP12.09□□□□□ -0.47
TUBD1-209ENST00000588706 RNF214Q8ND24 703 aa12.09□□□□□ -0.47
TUBD1-209ENST00000588706 NSUN7Q8NE18 718 aaKnown RBP12.09□□□□□ -0.47
TUBD1-209ENST00000588706 BICD2Q8TD16 824 aa12.09□□□□□ -0.47
TUBD1-209ENST00000588706 BRF1Q92994 677 aa12.09□□□□□ -0.47
TUBD1-209ENST00000588706 TBC1D2BQ9UPU7 963 aa12.09□□□□□ -0.47
TUBD1-209ENST00000588706 THRAP3Q9Y2W1 955 aaKnown RBP12.09□□□□□ -0.47
TUBD1-209ENST00000588706 AKAP11Q9UKA4 1901 aa12.08□□□□□ -0.48
TUBD1-209ENST00000588706 A0A1W2PQ27 194 aa12.08□□□□□ -0.48
TUBD1-209ENST00000588706 A0A1W2PQ64 194 aa12.08□□□□□ -0.48
TUBD1-209ENST00000588706 A0A1W2PQD8 194 aa12.08□□□□□ -0.48
TUBD1-209ENST00000588706 WNT7AO00755 349 aa12.08□□□□□ -0.48
TUBD1-209ENST00000588706 DYNC1I1O14576 645 aa12.08□□□□□ -0.48
TUBD1-209ENST00000588706 GDF9O60383 454 aa12.08□□□□□ -0.48
TUBD1-209ENST00000588706 YEATS4O95619 227 aa12.08□□□□□ -0.48
TUBD1-209ENST00000588706 ADCY5O95622 1261 aa12.08□□□□□ -0.48
TUBD1-209ENST00000588706 HCLS1P14317 486 aaPredicted RBP12.08□□□□□ -0.48
TUBD1-209ENST00000588706 RCAN1P53805 252 aa12.08□□□□□ -0.48
TUBD1-209ENST00000588706 PRR20EP86478 221 aa12.08□□□□□ -0.48
TUBD1-209ENST00000588706 PRR20CP86479 221 aa12.08□□□□□ -0.48
TUBD1-209ENST00000588706 PRR20DP86480 221 aa12.08□□□□□ -0.48
TUBD1-209ENST00000588706 PRR20BP86481 221 aa12.08□□□□□ -0.48
TUBD1-209ENST00000588706 PRR20AP86496 221 aa12.08□□□□□ -0.48
TUBD1-209ENST00000588706 TYRO3Q06418 890 aa12.08□□□□□ -0.48
TUBD1-209ENST00000588706 LAPTM4AQ15012 233 aa12.08□□□□□ -0.48
TUBD1-209ENST00000588706 ALX1Q15699 326 aa12.08□□□□□ -0.48
TUBD1-209ENST00000588706 ATP2B3Q16720 1220 aa12.08□□□□□ -0.48
TUBD1-209ENST00000588706 PARP10Q53GL7 1025 aa12.08□□□□□ -0.48
TUBD1-209ENST00000588706 PNMA1Q8ND90 353 aa12.08□□□□□ -0.48
TUBD1-209ENST00000588706 KCNG4Q8TDN1 519 aa12.08□□□□□ -0.48
TUBD1-209ENST00000588706 XAGE2Q96GT9 111 aa12.08□□□□□ -0.48
TUBD1-209ENST00000588706 TMEM87BQ96K49 555 aa12.08□□□□□ -0.48
TUBD1-209ENST00000588706 NAT10Q9H0A0 1025 aaKnown RBP12.08□□□□□ -0.48
TUBD1-209ENST00000588706 HMX1Q9NP08 348 aaPredicted RBP12.08□□□□□ -0.48
TUBD1-209ENST00000588706 PKD2L1Q9P0L9 805 aa12.08□□□□□ -0.48
TUBD1-209ENST00000588706 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.08□□□□□ -0.48
TUBD1-209ENST00000588706 DOCK2Q92608 1830 aa12.08□□□□□ -0.48
TUBD1-209ENST00000588706 GNAT2P19087 354 aa12.07□□□□□ -0.48
TUBD1-209ENST00000588706 CTSWP56202 376 aa12.07□□□□□ -0.48
TUBD1-209ENST00000588706 SCRN1Q12765 414 aa12.07□□□□□ -0.48
TUBD1-209ENST00000588706 CHAF1AQ13111 956 aaPredicted RBP12.07□□□□□ -0.48
TUBD1-209ENST00000588706 RC3H1Q5TC82 1133 aaKnown RBP12.07□□□□□ -0.48
TUBD1-209ENST00000588706 TRIM67Q6ZTA4 783 aa12.07□□□□□ -0.48
TUBD1-209ENST00000588706 TDRD7Q8NHU6 1098 aaKnown RBP12.07□□□□□ -0.48
TUBD1-209ENST00000588706 DDX17Q92841 729 aaKnown RBP12.07□□□□□ -0.48
TUBD1-209ENST00000588706 CHD4Q14839 1912 aa12.06□□□□□ -0.48
TUBD1-209ENST00000588706 PTPDC1A2A3K4 754 aa12.06□□□□□ -0.48
TUBD1-209ENST00000588706 ZNF213O14771 459 aa12.06□□□□□ -0.48
TUBD1-209ENST00000588706 KINO60870 393 aaKnown RBP12.06□□□□□ -0.48
TUBD1-209ENST00000588706 ARID4AP29374 1257 aaPredicted RBP12.06□□□□□ -0.48
TUBD1-209ENST00000588706 TIMM10P62072 90 aa12.06□□□□□ -0.48
TUBD1-209ENST00000588706 STX1AQ16623 288 aa12.06□□□□□ -0.48
TUBD1-209ENST00000588706 METTL24Q5JXM2 366 aa12.06□□□□□ -0.48
TUBD1-209ENST00000588706 SARM1Q6SZW1 724 aa12.06□□□□□ -0.48
TUBD1-209ENST00000588706 JMYQ8N9B5 988 aa12.06□□□□□ -0.48
TUBD1-209ENST00000588706 EHBP1Q8NDI1 1231 aa12.06□□□□□ -0.48
TUBD1-209ENST00000588706 DDX54Q8TDD1 881 aaKnown RBP12.06□□□□□ -0.48
TUBD1-209ENST00000588706 WASF1Q92558 559 aa12.06□□□□□ -0.48
TUBD1-209ENST00000588706 CNNM2Q9H8M5 875 aa12.06□□□□□ -0.48
TUBD1-209ENST00000588706 SPTLC3Q9NUV7 552 aa12.06□□□□□ -0.48
TUBD1-209ENST00000588706 ANO10Q9NW15 660 aa12.06□□□□□ -0.48
TUBD1-209ENST00000588706 DACT1Q9NYF0 836 aa12.06□□□□□ -0.48
TUBD1-209ENST00000588706 FKBPLQ9UIM3 349 aa12.06□□□□□ -0.48
TUBD1-209ENST00000588706 RIC1Q4ADV7 1423 aa12.05□□□□□ -0.48
TUBD1-209ENST00000588706 NRG2O14511 850 aaPredicted RBP12.05□□□□□ -0.48
TUBD1-209ENST00000588706 CPLX1O14810 134 aa12.05□□□□□ -0.48
TUBD1-209ENST00000588706 MYO1BO43795 1136 aa12.05□□□□□ -0.48
TUBD1-209ENST00000588706 PDIA3P30101 505 aaKnown RBP12.05□□□□□ -0.48
TUBD1-209ENST00000588706 FAM160A1Q05DH4 1040 aa12.05□□□□□ -0.48
TUBD1-209ENST00000588706 AGERQ15109 404 aa12.05□□□□□ -0.48
TUBD1-209ENST00000588706 PPP2R5BQ15173 497 aa12.05□□□□□ -0.48
TUBD1-209ENST00000588706 PUM3Q15397 648 aaKnown RBP12.05□□□□□ -0.48
TUBD1-209ENST00000588706 LRRC24Q50LG9 513 aa12.05□□□□□ -0.48
TUBD1-209ENST00000588706 GIMAP6Q6P9H5 292 aa12.05□□□□□ -0.48
TUBD1-209ENST00000588706 LDHAL6AQ6ZMR3 332 aa12.05□□□□□ -0.48
TUBD1-209ENST00000588706 NLRP10Q86W26 655 aa12.05□□□□□ -0.48
TUBD1-209ENST00000588706 LPIN2Q92539 896 aa12.05□□□□□ -0.48
TUBD1-209ENST00000588706 EDC3Q96F86 508 aaKnown RBP12.05□□□□□ -0.48
TUBD1-209ENST00000588706 RTEL1Q9NZ71 1219 aa12.05□□□□□ -0.48
TUBD1-209ENST00000588706 RIPOR2Q9Y4F9 1068 aa12.05□□□□□ -0.48
TUBD1-209ENST00000588706 TIAM2Q8IVF5 1701 aa12.05□□□□□ -0.48
TUBD1-209ENST00000588706 NID2Q14112 1375 aa12.05□□□□□ -0.48
TUBD1-209ENST00000588706 NWD2Q9ULI1 1742 aa12.04□□□□□ -0.48
TUBD1-209ENST00000588706 GOLGA6L19H0YKK7 550 aa12.04□□□□□ -0.48
TUBD1-209ENST00000588706 EXOC5O00471 708 aa12.04□□□□□ -0.48
TUBD1-209ENST00000588706 PDE8BO95263 885 aa12.04□□□□□ -0.48
TUBD1-209ENST00000588706 PCP11498 1178 aaKnown RBP12.04□□□□□ -0.48
TUBD1-209ENST00000588706 SLC5A1P13866 664 aa12.04□□□□□ -0.48
TUBD1-209ENST00000588706 ADD2P35612 726 aa12.04□□□□□ -0.48
TUBD1-209ENST00000588706 TPM4P67936 248 aa12.04□□□□□ -0.48
TUBD1-209ENST00000588706 FKBP4Q02790 459 aaKnown RBP eCLIP12.04□□□□□ -0.48
TUBD1-209ENST00000588706 ZRSR1Q15695 479 aaKnown RBP12.04□□□□□ -0.48
TUBD1-209ENST00000588706 WASHC4Q2M389 1173 aa12.04□□□□□ -0.48
TUBD1-209ENST00000588706 FOXD4L6Q3SYB3 417 aaPredicted RBP12.04□□□□□ -0.48
TUBD1-209ENST00000588706 ADALQ6DHV7 355 aa12.04□□□□□ -0.48
TUBD1-209ENST00000588706 FOXD4L3Q6VB84 417 aaPredicted RBP12.04□□□□□ -0.48
TUBD1-209ENST00000588706 CCDC129Q6ZRS4 1044 aa12.04□□□□□ -0.48
TUBD1-209ENST00000588706 STOX1Q6ZVD7 989 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms