RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 IFNAR1P17181 557 aa20.32■□□□□ 0.84
ERCC2-211ENST00000588652 SF3A1Q15459 793 aaKnown RBP20.32■□□□□ 0.84
ERCC2-211ENST00000588652 FMR1NBQ8N0W7 255 aaPredicted RBP20.32■□□□□ 0.84
ERCC2-211ENST00000588652 NSUN4Q96CB9 384 aaKnown RBP20.32■□□□□ 0.84
ERCC2-211ENST00000588652 TFCP2L1Q9NZI6 479 aa20.32■□□□□ 0.84
ERCC2-211ENST00000588652 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.32■□□□□ 0.84
ERCC2-211ENST00000588652 SMIM22K7EJ46 135 aa20.32■□□□□ 0.84
ERCC2-211ENST00000588652 CCDC144BQ3MJ40 725 aa20.32■□□□□ 0.84
ERCC2-211ENST00000588652 TRAPPC3LQ5T215 181 aa20.32■□□□□ 0.84
ERCC2-211ENST00000588652 ANO1Q5XXA6 986 aa20.32■□□□□ 0.84
ERCC2-211ENST00000588652 TMTC2Q8N394 836 aa20.32■□□□□ 0.84
ERCC2-211ENST00000588652 BRIP1Q9BX63 1249 aa20.32■□□□□ 0.84
ERCC2-211ENST00000588652 MYH2Q9UKX2 1941 aa20.31■□□□□ 0.84
ERCC2-211ENST00000588652 A0A087WWV3 80 aa20.31■□□□□ 0.84
ERCC2-211ENST00000588652 FMNL1O95466 1100 aaPredicted RBP20.31■□□□□ 0.84
ERCC2-211ENST00000588652 SSRP1Q08945 709 aaKnown RBP20.31■□□□□ 0.84
ERCC2-211ENST00000588652 CHAF1AQ13111 956 aaPredicted RBP20.31■□□□□ 0.84
ERCC2-211ENST00000588652 DHX40Q8IX18 779 aaKnown RBP20.31■□□□□ 0.84
ERCC2-211ENST00000588652 SLC26A6Q9BXS9 759 aa20.31■□□□□ 0.84
ERCC2-211ENST00000588652 ANO10Q9NW15 660 aa20.31■□□□□ 0.84
ERCC2-211ENST00000588652 PODXL2Q9NZ53 605 aa20.31■□□□□ 0.84
ERCC2-211ENST00000588652 UBE2Q2LH0YL09 131 aa20.31■□□□□ 0.84
ERCC2-211ENST00000588652 NPHP1O15259 732 aa20.31■□□□□ 0.84
ERCC2-211ENST00000588652 ZNF710Q8N1W2 664 aa20.31■□□□□ 0.84
ERCC2-211ENST00000588652 MRFAP1L1Q96HT8 127 aa20.31■□□□□ 0.84
ERCC2-211ENST00000588652 A0A1B0GVL5 298 aa20.3■□□□□ 0.84
ERCC2-211ENST00000588652 MECOMQ03112 1051 aa20.3■□□□□ 0.84
ERCC2-211ENST00000588652 RTN1Q16799 776 aa20.3■□□□□ 0.84
ERCC2-211ENST00000588652 FAM196AQ6ZSG2 479 aa20.3■□□□□ 0.84
ERCC2-211ENST00000588652 CACTINQ8WUQ7 758 aaKnown RBP20.3■□□□□ 0.84
ERCC2-211ENST00000588652 ESR2Q92731 530 aa20.3■□□□□ 0.84
ERCC2-211ENST00000588652 UBAC1Q9BSL1 405 aa20.3■□□□□ 0.84
ERCC2-211ENST00000588652 ONECUT3O60422 494 aaPredicted RBP20.29■□□□□ 0.84
ERCC2-211ENST00000588652 TRIM29Q14134 588 aa20.29■□□□□ 0.84
ERCC2-211ENST00000588652 MEX3CQ5U5Q3 659 aaKnown RBP20.29■□□□□ 0.84
ERCC2-211ENST00000588652 TXNRD3Q86VQ6 643 aa20.29■□□□□ 0.84
ERCC2-211ENST00000588652 DUOX1Q9NRD9 1551 aa20.29■□□□□ 0.84
ERCC2-211ENST00000588652 BECN2A8MW95 431 aa20.29■□□□□ 0.84
ERCC2-211ENST00000588652 U2AF2P26368 475 aaKnown RBP eCLIP20.29■□□□□ 0.84
ERCC2-211ENST00000588652 NDUFA8P51970 172 aa20.29■□□□□ 0.84
ERCC2-211ENST00000588652 RCAN1P53805 252 aa20.29■□□□□ 0.84
ERCC2-211ENST00000588652 CCDC88AQ3V6T2 1871 aa20.29■□□□□ 0.84
ERCC2-211ENST00000588652 RIOK3O14730 519 aaKnown RBP20.28■□□□□ 0.84
ERCC2-211ENST00000588652 NFIXQ14938 502 aa20.28■□□□□ 0.84
ERCC2-211ENST00000588652 SLC39A14Q15043 492 aa20.28■□□□□ 0.84
ERCC2-211ENST00000588652 SEC23AQ15436 765 aa20.28■□□□□ 0.84
ERCC2-211ENST00000588652 ZNF654Q8IZM8 581 aa20.28■□□□□ 0.84
ERCC2-211ENST00000588652 ERCC4Q92889 916 aaPredicted RBP20.28■□□□□ 0.84
ERCC2-211ENST00000588652 TNKSO95271 1327 aa20.28■□□□□ 0.84
ERCC2-211ENST00000588652 AFF2P51816 1311 aa20.28■□□□□ 0.84
ERCC2-211ENST00000588652 IRS2Q9Y4H2 1338 aa20.28■□□□□ 0.84
ERCC2-211ENST00000588652 CYP2D7A0A087X1C5 515 aa20.28■□□□□ 0.84
ERCC2-211ENST00000588652 PRDX5P30044 214 aa20.28■□□□□ 0.84
ERCC2-211ENST00000588652 GNL2Q13823 731 aaKnown RBP20.28■□□□□ 0.84
ERCC2-211ENST00000588652 AXDND1Q5T1B0 1012 aaPredicted RBP20.28■□□□□ 0.84
ERCC2-211ENST00000588652 WASF1Q92558 559 aa20.28■□□□□ 0.84
ERCC2-211ENST00000588652 LRRC4BQ9NT99 713 aa20.28■□□□□ 0.84
ERCC2-211ENST00000588652 GUCY1A2P33402 732 aa20.27■□□□□ 0.84
ERCC2-211ENST00000588652 CEP57L1Q8IYX8 460 aa20.27■□□□□ 0.84
ERCC2-211ENST00000588652 FANCBQ8NB91 859 aa20.27■□□□□ 0.84
ERCC2-211ENST00000588652 CCDC196A0A1B0GTZ2 297 aa20.27■□□□□ 0.84
ERCC2-211ENST00000588652 CTR9Q6PD62 1173 aa20.27■□□□□ 0.84
ERCC2-211ENST00000588652 NBPF11Q86T75 865 aa20.27■□□□□ 0.84
ERCC2-211ENST00000588652 TRIM22Q8IYM9 498 aa20.27■□□□□ 0.84
ERCC2-211ENST00000588652 FGRP09769 529 aa20.26■□□□□ 0.83
ERCC2-211ENST00000588652 SEPT12Q8IYM1 358 aa20.26■□□□□ 0.83
ERCC2-211ENST00000588652 SDF4Q9BRK5 362 aa20.26■□□□□ 0.83
ERCC2-211ENST00000588652 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.26■□□□□ 0.83
ERCC2-211ENST00000588652 NAT10Q9H0A0 1025 aaKnown RBP20.26■□□□□ 0.83
ERCC2-211ENST00000588652 AATFQ9NY61 560 aaKnown RBP eCLIP20.26■□□□□ 0.83
ERCC2-211ENST00000588652 EP400Q96L91 3159 aa20.26■□□□□ 0.83
ERCC2-211ENST00000588652 MAST2Q6P0Q8 1798 aa20.26■□□□□ 0.83
ERCC2-211ENST00000588652 CRACR2BQ8N4Y2 399 aaPredicted RBP20.26■□□□□ 0.83
ERCC2-211ENST00000588652 AOPEPQ8N6M6 819 aa20.26■□□□□ 0.83
ERCC2-211ENST00000588652 CNBD1Q8NA66 436 aa20.26■□□□□ 0.83
ERCC2-211ENST00000588652 NUP133Q8WUM0 1156 aa20.26■□□□□ 0.83
ERCC2-211ENST00000588652 USP17L12C9JPN9 530 aa20.25■□□□□ 0.83
ERCC2-211ENST00000588652 USP17L21D6R901 530 aa20.25■□□□□ 0.83
ERCC2-211ENST00000588652 WDHD1O75717 1129 aaPredicted RBP20.25■□□□□ 0.83
ERCC2-211ENST00000588652 PCP11498 1178 aaKnown RBP20.25■□□□□ 0.83
ERCC2-211ENST00000588652 GRAPQ13588 217 aa20.25■□□□□ 0.83
ERCC2-211ENST00000588652 CCDC82Q8N4S0 544 aa20.25■□□□□ 0.83
ERCC2-211ENST00000588652 ENAHQ8N8S7 591 aaPredicted RBP20.25■□□□□ 0.83
ERCC2-211ENST00000588652 GRAPLQ8TC17 118 aaPredicted RBP20.25■□□□□ 0.83
ERCC2-211ENST00000588652 BCL11BQ9C0K0 894 aaPredicted RBP20.25■□□□□ 0.83
ERCC2-211ENST00000588652 CMA1P23946 247 aa20.25■□□□□ 0.83
ERCC2-211ENST00000588652 MARCKSP29966 332 aaPredicted RBP20.25■□□□□ 0.83
ERCC2-211ENST00000588652 PTPAQ15257 358 aa20.25■□□□□ 0.83
ERCC2-211ENST00000588652 ZRSR1Q15695 479 aaKnown RBP20.25■□□□□ 0.83
ERCC2-211ENST00000588652 LRRC8AQ8IWT6 810 aa20.25■□□□□ 0.83
ERCC2-211ENST00000588652 CMTR1Q8N1G2 835 aaKnown RBP20.25■□□□□ 0.83
ERCC2-211ENST00000588652 ZSCAN10Q96SZ4 725 aaPredicted RBP20.25■□□□□ 0.83
ERCC2-211ENST00000588652 MAP3K14Q99558 947 aa20.25■□□□□ 0.83
ERCC2-211ENST00000588652 MYH6P13533 1939 aa20.25■□□□□ 0.83
ERCC2-211ENST00000588652 PRDM1O75626 825 aa20.24■□□□□ 0.83
ERCC2-211ENST00000588652 DEXIO95424 95 aa20.24■□□□□ 0.83
ERCC2-211ENST00000588652 MMP1P03956 469 aa20.24■□□□□ 0.83
ERCC2-211ENST00000588652 SLC51AQ86UW1 340 aa20.24■□□□□ 0.83
ERCC2-211ENST00000588652 C16orf45Q96MC5 204 aaPredicted RBP20.24■□□□□ 0.83
ERCC2-211ENST00000588652 CRNKL1Q9BZJ0 848 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms