RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 LRRC47Q8N1G4 583 aaKnown RBP10.47□□□□□ -0.73
VMP1-208ENST00000588617 ZBTB38Q8NAP3 1195 aaPredicted RBP10.47□□□□□ -0.73
VMP1-208ENST00000588617 CHAC2Q8WUX2 184 aa10.47□□□□□ -0.73
VMP1-208ENST00000588617 SLC7A3Q8WY07 619 aa10.47□□□□□ -0.73
VMP1-208ENST00000588617 NINJ1Q92982 152 aa10.47□□□□□ -0.73
VMP1-208ENST00000588617 TNFRSF25Q93038 417 aa10.47□□□□□ -0.73
VMP1-208ENST00000588617 MFSD3Q96ES6 412 aa10.47□□□□□ -0.73
VMP1-208ENST00000588617 LPIN3Q9BQK8 851 aa10.47□□□□□ -0.73
VMP1-208ENST00000588617 SLC52A1Q9NWF4 448 aa10.47□□□□□ -0.73
VMP1-208ENST00000588617 ATP8A1Q9Y2Q0 1164 aa10.47□□□□□ -0.73
VMP1-208ENST00000588617 IQCA1LA6NCM1 817 aa10.46□□□□□ -0.73
VMP1-208ENST00000588617 TERTO14746 1132 aaKnown RBP10.46□□□□□ -0.73
VMP1-208ENST00000588617 SUSD5O60279 629 aa10.46□□□□□ -0.73
VMP1-208ENST00000588617 ADH7P40394 386 aa10.46□□□□□ -0.73
VMP1-208ENST00000588617 SLC10A6Q3KNW5 377 aa10.46□□□□□ -0.73
VMP1-208ENST00000588617 TM4SF20Q53R12 229 aa10.46□□□□□ -0.73
VMP1-208ENST00000588617 NLRC3Q7RTR2 1065 aa10.46□□□□□ -0.73
VMP1-208ENST00000588617 FMNL3Q8IVF7 1028 aa10.46□□□□□ -0.73
VMP1-208ENST00000588617 ELMO3Q96BJ8 720 aa10.46□□□□□ -0.73
VMP1-208ENST00000588617 CORO1BQ9BR76 489 aa10.46□□□□□ -0.73
VMP1-208ENST00000588617 C2CD2LO14523 706 aa10.45□□□□□ -0.74
VMP1-208ENST00000588617 IRS4O14654 1257 aaPredicted RBP10.45□□□□□ -0.74
VMP1-208ENST00000588617 ADCY3O60266 1144 aa10.45□□□□□ -0.74
VMP1-208ENST00000588617 CYP11A1P05108 521 aa10.45□□□□□ -0.74
VMP1-208ENST00000588617 PDE4BQ07343 736 aa10.45□□□□□ -0.74
VMP1-208ENST00000588617 ZC3H12BQ5HYM0 836 aaKnown RBP10.45□□□□□ -0.74
VMP1-208ENST00000588617 SLC9A7Q96T83 725 aa10.45□□□□□ -0.74
VMP1-208ENST00000588617 EPN3Q9H201 632 aa10.45□□□□□ -0.74
VMP1-208ENST00000588617 SOX17Q9H6I2 414 aaPredicted RBP10.45□□□□□ -0.74
VMP1-208ENST00000588617 FRRS1LQ9P0K9 344 aa10.45□□□□□ -0.74
VMP1-208ENST00000588617 ARL4DP49703 201 aa10.44□□□□□ -0.74
VMP1-208ENST00000588617 CDKN1CP49918 316 aaPredicted RBP10.44□□□□□ -0.74
VMP1-208ENST00000588617 SLC7A5Q01650 507 aa10.44□□□□□ -0.74
VMP1-208ENST00000588617 POU4F3Q15319 338 aa10.44□□□□□ -0.74
VMP1-208ENST00000588617 CT47A1Q5JQC4 288 aaPredicted RBP10.44□□□□□ -0.74
VMP1-208ENST00000588617 PSAPL1Q6NUJ1 521 aa10.44□□□□□ -0.74
VMP1-208ENST00000588617 CACTIN-AS1Q8N1I8 211 aa10.44□□□□□ -0.74
VMP1-208ENST00000588617 CCDC86Q9H6F5 360 aaKnown RBP10.44□□□□□ -0.74
VMP1-208ENST00000588617 CNNM2Q9H8M5 875 aa10.44□□□□□ -0.74
VMP1-208ENST00000588617 KRT82Q9NSB4 513 aa10.44□□□□□ -0.74
VMP1-208ENST00000588617 KLHL3Q9UH77 587 aa10.44□□□□□ -0.74
VMP1-208ENST00000588617 CCDC163A0A0D9SF12 145 aa10.43□□□□□ -0.74
VMP1-208ENST00000588617 CDC14CA4D256 554 aa10.43□□□□□ -0.74
VMP1-208ENST00000588617 TNFRSF10CO14798 259 aa10.43□□□□□ -0.74
VMP1-208ENST00000588617 EIF4EBP3O60516 100 aaPredicted RBP10.43□□□□□ -0.74
VMP1-208ENST00000588617 EIF5BO60841 1220 aaKnown RBP10.43□□□□□ -0.74
VMP1-208ENST00000588617 DNAJA2O60884 412 aa10.43□□□□□ -0.74
VMP1-208ENST00000588617 ECEL1O95672 775 aa10.43□□□□□ -0.74
VMP1-208ENST00000588617 STAT3P40763 770 aa10.43□□□□□ -0.74
VMP1-208ENST00000588617 PABPC4Q13310 644 aaKnown RBP eCLIP10.43□□□□□ -0.74
VMP1-208ENST00000588617 CBX2Q14781 532 aaPredicted RBP10.43□□□□□ -0.74
VMP1-208ENST00000588617 GNPTABQ3T906 1256 aa10.43□□□□□ -0.74
VMP1-208ENST00000588617 CDCP2Q5VXM1 449 aa10.43□□□□□ -0.74
VMP1-208ENST00000588617 THNSL2Q86YJ6 484 aa10.43□□□□□ -0.74
VMP1-208ENST00000588617 FAM126AQ9BYI3 521 aaPredicted RBP10.43□□□□□ -0.74
VMP1-208ENST00000588617 CAAP1Q9H8G2 361 aa10.43□□□□□ -0.74
VMP1-208ENST00000588617 C19orf57Q0VDD7 668 aa10.42□□□□□ -0.74
VMP1-208ENST00000588617 TTC9Q92623 222 aa10.42□□□□□ -0.74
VMP1-208ENST00000588617 AVENQ9NQS1 362 aaPredicted RBP10.42□□□□□ -0.74
VMP1-208ENST00000588617 TACC3Q9Y6A5 838 aa10.42□□□□□ -0.74
VMP1-208ENST00000588617 DCDC2CA8MYV0 355 aa10.41□□□□□ -0.74
VMP1-208ENST00000588617 AGRPO00253 132 aa10.41□□□□□ -0.74
VMP1-208ENST00000588617 KCNQ2O43526 872 aa10.41□□□□□ -0.74
VMP1-208ENST00000588617 RGS9O75916 674 aaPredicted RBP10.41□□□□□ -0.74
VMP1-208ENST00000588617 MAP4K4O95819 1239 aaPredicted RBP10.41□□□□□ -0.74
VMP1-208ENST00000588617 MAOBP27338 520 aa10.41□□□□□ -0.74
VMP1-208ENST00000588617 L1CAMP32004 1257 aa10.41□□□□□ -0.74
VMP1-208ENST00000588617 SOX5P35711 763 aa10.41□□□□□ -0.74
VMP1-208ENST00000588617 HNRNPUQ00839 825 aaKnown RBP eCLIP10.41□□□□□ -0.74
VMP1-208ENST00000588617 PDE3AQ14432 1141 aa10.41□□□□□ -0.74
VMP1-208ENST00000588617 TMEM201Q5SNT2 666 aa10.41□□□□□ -0.74
VMP1-208ENST00000588617 FAM117BQ6P1L5 589 aa10.41□□□□□ -0.74
VMP1-208ENST00000588617 DDX42Q86XP3 938 aaKnown RBP eCLIP10.41□□□□□ -0.74
VMP1-208ENST00000588617 IL22RA1Q8N6P7 574 aa10.41□□□□□ -0.74
VMP1-208ENST00000588617 KLHL6Q8WZ60 621 aa10.41□□□□□ -0.74
VMP1-208ENST00000588617 A0A087X0B3 334 aa10.4□□□□□ -0.74
VMP1-208ENST00000588617 PRAMEF27A3QJZ7 478 aa10.4□□□□□ -0.74
VMP1-208ENST00000588617 ADARB2-AS1A8MUL3 147 aa10.4□□□□□ -0.74
VMP1-208ENST00000588617 CHURC1-FNTBB4DL54 471 aa10.4□□□□□ -0.74
VMP1-208ENST00000588617 PGRP06401 933 aa10.4□□□□□ -0.74
VMP1-208ENST00000588617 LIG1P18858 919 aa10.4□□□□□ -0.74
VMP1-208ENST00000588617 PIP4K2BP78356 416 aa10.4□□□□□ -0.74
VMP1-208ENST00000588617 NFKB2Q00653 900 aa10.4□□□□□ -0.74
VMP1-208ENST00000588617 EXOSC10Q01780 885 aaKnown RBP10.4□□□□□ -0.74
VMP1-208ENST00000588617 SV2CQ496J9 727 aa10.4□□□□□ -0.74
VMP1-208ENST00000588617 BRDTQ58F21 947 aaPredicted RBP10.4□□□□□ -0.74
VMP1-208ENST00000588617 FOXB2Q5VYV0 432 aa10.4□□□□□ -0.74
VMP1-208ENST00000588617 TXNDC11Q6PKC3 985 aa10.4□□□□□ -0.74
VMP1-208ENST00000588617 CYFIP1Q7L576 1253 aa10.4□□□□□ -0.74
VMP1-208ENST00000588617 UBR7Q8N806 425 aa10.4□□□□□ -0.74
VMP1-208ENST00000588617 NUDT8Q8WV74 236 aa10.4□□□□□ -0.74
VMP1-208ENST00000588617 SGSM3Q96HU1 749 aa10.4□□□□□ -0.74
VMP1-208ENST00000588617 CDC6Q99741 560 aa10.4□□□□□ -0.74
VMP1-208ENST00000588617 NXF1Q9UBU9 619 aaKnown RBP10.4□□□□□ -0.74
VMP1-208ENST00000588617 KLF15Q9UIH9 416 aa10.4□□□□□ -0.74
VMP1-208ENST00000588617 ZNF214Q9UL59 606 aaPredicted RBP10.4□□□□□ -0.74
VMP1-208ENST00000588617 WIPF1O43516 503 aa10.39□□□□□ -0.75
VMP1-208ENST00000588617 ZNF862O60290 1169 aa10.39□□□□□ -0.75
VMP1-208ENST00000588617 PDE8AO60658 829 aa10.39□□□□□ -0.75
VMP1-208ENST00000588617 RFPL3O75679 317 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms