RNA–Protein interactions for RNA: ENST00000588552.5

PTPRS-206, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 1 (best)

Gene PTPRS, Length 5,443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-206ENST00000588552 CPXCR1Q8N123 301 aa17.48■□□□□ 0.39
PTPRS-206ENST00000588552 ZSCAN10Q96SZ4 725 aaPredicted RBP17.48■□□□□ 0.39
PTPRS-206ENST00000588552 STAP2Q9UGK3 403 aa17.48■□□□□ 0.39
PTPRS-206ENST00000588552 MYL5Q02045 173 aa17.48■□□□□ 0.39
PTPRS-206ENST00000588552 ERFEQ4G0M1 354 aa17.48■□□□□ 0.39
PTPRS-206ENST00000588552 KIAA0825Q8IV33 1275 aa17.48■□□□□ 0.39
PTPRS-206ENST00000588552 GTF3C6Q969F1 213 aa17.48■□□□□ 0.39
PTPRS-206ENST00000588552 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.48■□□□□ 0.395e-7■■■■■ 27.6
PTPRS-206ENST00000588552 SERPINB2P05120 415 aa17.48■□□□□ 0.39
PTPRS-206ENST00000588552 RPL13P26373 211 aaKnown RBP17.48■□□□□ 0.39
PTPRS-206ENST00000588552 ERVV-1B6SEH8 477 aa17.47■□□□□ 0.39
PTPRS-206ENST00000588552 BTDP43251 543 aa17.47■□□□□ 0.39
PTPRS-206ENST00000588552 NLRP10Q86W26 655 aa17.47■□□□□ 0.39
PTPRS-206ENST00000588552 TLR7Q9NYK1 1049 aaKnown RBP17.47■□□□□ 0.39
PTPRS-206ENST00000588552 PAXBP1Q9Y5B6 917 aa17.47■□□□□ 0.39
PTPRS-206ENST00000588552 SPDYE4A6NLX3 237 aa17.47■□□□□ 0.39
PTPRS-206ENST00000588552 FGAP02671 866 aa17.47■□□□□ 0.39
PTPRS-206ENST00000588552 LEO1Q8WVC0 666 aaPredicted RBP17.47■□□□□ 0.39
PTPRS-206ENST00000588552 ZNF274Q96GC6 653 aaPredicted RBP17.47■□□□□ 0.39
PTPRS-206ENST00000588552 POLR2DO15514 142 aaKnown RBP17.47■□□□□ 0.39
PTPRS-206ENST00000588552 PDE4DQ08499 809 aa17.47■□□□□ 0.39
PTPRS-206ENST00000588552 UBE3CQ15386 1083 aa17.47■□□□□ 0.39
PTPRS-206ENST00000588552 SPECC1Q5M775 1068 aa17.47■□□□□ 0.39
PTPRS-206ENST00000588552 SEC31BQ9NQW1 1179 aa17.47■□□□□ 0.39
PTPRS-206ENST00000588552 VPS54Q9P1Q0 977 aa17.47■□□□□ 0.39
PTPRS-206ENST00000588552 MYCLP12524 364 aaPredicted RBP17.47■□□□□ 0.39
PTPRS-206ENST00000588552 ZSWIM4Q9H7M6 989 aa17.47■□□□□ 0.39
PTPRS-206ENST00000588552 PPEF1O14829 653 aaPredicted RBP17.46■□□□□ 0.39
PTPRS-206ENST00000588552 PPP1R2P41236 205 aa17.46■□□□□ 0.39
PTPRS-206ENST00000588552 TNFAIP1Q13829 316 aa17.46■□□□□ 0.39
PTPRS-206ENST00000588552 LEMD3Q9Y2U8 911 aa17.46■□□□□ 0.39
PTPRS-206ENST00000588552 ABCA9Q8IUA7 1624 aa17.46■□□□□ 0.39
PTPRS-206ENST00000588552 ADGRB3O60242 1522 aa17.46■□□□□ 0.39
PTPRS-206ENST00000588552 CCDC42Q96M95 316 aa17.46■□□□□ 0.39
PTPRS-206ENST00000588552 CGNQ9P2M7 1197 aaKnown RBP17.46■□□□□ 0.39
PTPRS-206ENST00000588552 PALD1Q9ULE6 856 aa17.46■□□□□ 0.39
PTPRS-206ENST00000588552 TRAF5O00463 557 aa17.46■□□□□ 0.38
PTPRS-206ENST00000588552 CCDC175P0C221 793 aa17.46■□□□□ 0.38
PTPRS-206ENST00000588552 DYDC1Q8WWB3 177 aa17.46■□□□□ 0.38
PTPRS-206ENST00000588552 PLVAPQ9BX97 442 aa17.46■□□□□ 0.38
PTPRS-206ENST00000588552 LRWD1Q9UFC0 647 aa17.46■□□□□ 0.38
PTPRS-206ENST00000588552 CTNND2Q9UQB3 1225 aa17.46■□□□□ 0.38
PTPRS-206ENST00000588552 CYP27B1O15528 508 aa17.45■□□□□ 0.38
PTPRS-206ENST00000588552 KRT83P78385 493 aa17.45■□□□□ 0.38
PTPRS-206ENST00000588552 NCAPH2Q6IBW4 605 aa17.45■□□□□ 0.38
PTPRS-206ENST00000588552 CFBP00751 764 aa17.45■□□□□ 0.38
PTPRS-206ENST00000588552 SEPT12Q8IYM1 358 aa17.45■□□□□ 0.38
PTPRS-206ENST00000588552 CNNM4Q6P4Q7 775 aa17.45■□□□□ 0.38
PTPRS-206ENST00000588552 CLSTN2Q9H4D0 955 aa17.45■□□□□ 0.38
PTPRS-206ENST00000588552 ZSWIM6Q9HCJ5 1215 aa17.45■□□□□ 0.38
PTPRS-206ENST00000588552 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.45■□□□□ 0.38
PTPRS-206ENST00000588552 EZRP15311 586 aaKnown RBP17.45■□□□□ 0.38
PTPRS-206ENST00000588552 NOLC1Q14978 699 aaKnown RBP eCLIP17.45■□□□□ 0.383e-9■□□□□ 8.5
PTPRS-206ENST00000588552 NSMFQ6X4W1 530 aa17.45■□□□□ 0.38
PTPRS-206ENST00000588552 HOMER2Q9NSB8 354 aa17.45■□□□□ 0.38
PTPRS-206ENST00000588552 DNAI1Q9UI46 699 aa17.45■□□□□ 0.38
PTPRS-206ENST00000588552 AXIN2Q9Y2T1 843 aa17.45■□□□□ 0.38
PTPRS-206ENST00000588552 CDC42BPBQ9Y5S2 1711 aa17.44■□□□□ 0.38
PTPRS-206ENST00000588552 DCAF17Q5H9S7 520 aaPredicted RBP17.44■□□□□ 0.38
PTPRS-206ENST00000588552 ATG3Q9NT62 314 aa17.44■□□□□ 0.38
PTPRS-206ENST00000588552 SEMA3EO15041 775 aa17.44■□□□□ 0.38
PTPRS-206ENST00000588552 REXO1Q8N1G1 1221 aaKnown RBP17.44■□□□□ 0.38
PTPRS-206ENST00000588552 TTC12Q9H892 705 aaPredicted RBP17.44■□□□□ 0.38
PTPRS-206ENST00000588552 PALLDQ8WX93 1383 aa17.44■□□□□ 0.38
PTPRS-206ENST00000588552 TNKSO95271 1327 aa17.44■□□□□ 0.38
PTPRS-206ENST00000588552 SNX29Q8TEQ0 813 aa17.44■□□□□ 0.38
PTPRS-206ENST00000588552 FRMD4BQ9Y2L6 1034 aa17.44■□□□□ 0.38
PTPRS-206ENST00000588552 IVNS1ABPQ9Y6Y0 642 aa17.44■□□□□ 0.38
PTPRS-206ENST00000588552 TACC1O75410 805 aa17.44■□□□□ 0.38
PTPRS-206ENST00000588552 LUC7L2Q9Y383 392 aaKnown RBP17.44■□□□□ 0.38
PTPRS-206ENST00000588552 TCP10L2B9ZVM9 353 aa17.43■□□□□ 0.38
PTPRS-206ENST00000588552 CALCRLQ16602 461 aa17.43■□□□□ 0.38
PTPRS-206ENST00000588552 KIFC2Q96AC6 838 aa17.43■□□□□ 0.38
PTPRS-206ENST00000588552 STK24Q9Y6E0 443 aa17.43■□□□□ 0.38
PTPRS-206ENST00000588552 KIF5AQ12840 1032 aa17.43■□□□□ 0.38
PTPRS-206ENST00000588552 SMTNP53814 917 aa17.43■□□□□ 0.38
PTPRS-206ENST00000588552 CKAP4Q07065 602 aaKnown RBP17.43■□□□□ 0.38
PTPRS-206ENST00000588552 KIAA0753Q2KHM9 967 aa17.43■□□□□ 0.38
PTPRS-206ENST00000588552 OSBPL3Q9H4L5 887 aa17.43■□□□□ 0.38
PTPRS-206ENST00000588552 GOLGA6L10A0A0M3HER8 536 aa17.43■□□□□ 0.38
PTPRS-206ENST00000588552 ZNF202O95125 648 aa17.43■□□□□ 0.38
PTPRS-206ENST00000588552 CMTR1Q8N1G2 835 aaKnown RBP17.43■□□□□ 0.38
PTPRS-206ENST00000588552 FANCBQ8NB91 859 aa17.43■□□□□ 0.38
PTPRS-206ENST00000588552 CROCC2H7BZ55 1655 aa17.43■□□□□ 0.38
PTPRS-206ENST00000588552 NCAPD2Q15021 1401 aa17.43■□□□□ 0.38
PTPRS-206ENST00000588552 SMCO2A6NFE2 343 aa17.42■□□□□ 0.38
PTPRS-206ENST00000588552 ACTN2P35609 894 aa17.42■□□□□ 0.38
PTPRS-206ENST00000588552 ZMYM1Q5SVZ6 1142 aa17.42■□□□□ 0.38
PTPRS-206ENST00000588552 RGS22Q8NE09 1264 aa17.42■□□□□ 0.38
PTPRS-206ENST00000588552 FERMT1Q9BQL6 677 aa17.42■□□□□ 0.38
PTPRS-206ENST00000588552 GOLGA6L7A0A1B0GV03 622 aa17.42■□□□□ 0.38
PTPRS-206ENST00000588552 DDX39AO00148 427 aaKnown RBP17.42■□□□□ 0.38
PTPRS-206ENST00000588552 KRT86O43790 486 aa17.42■□□□□ 0.38
PTPRS-206ENST00000588552 CHURC1Q8WUH1 139 aa17.42■□□□□ 0.38
PTPRS-206ENST00000588552 BCCIPQ9P287 314 aaKnown RBP eCLIP17.42■□□□□ 0.38
PTPRS-206ENST00000588552 ATP10DQ9P241 1426 aa17.42■□□□□ 0.38
PTPRS-206ENST00000588552 ARHGEF35A5YM69 484 aa17.42■□□□□ 0.38
PTPRS-206ENST00000588552 CCDC169A6NNP5 214 aa17.42■□□□□ 0.38
PTPRS-206ENST00000588552 PFKFB2O60825 505 aa17.42■□□□□ 0.38
PTPRS-206ENST00000588552 EPB41P11171 864 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms