RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 NID2Q14112 1375 aa16.21■□□□□ 0.19
NEDD4L-223ENST00000588516 C4AP0C0L4 1744 aa16.21■□□□□ 0.19
NEDD4L-223ENST00000588516 ARFGEF1Q9Y6D6 1849 aa16.21■□□□□ 0.19
NEDD4L-223ENST00000588516 FAM237AA0A1B0GTK4 181 aa16.2■□□□□ 0.18
NEDD4L-223ENST00000588516 FOXN1O15353 648 aa16.2■□□□□ 0.18
NEDD4L-223ENST00000588516 FOXP2O15409 715 aa16.2■□□□□ 0.18
NEDD4L-223ENST00000588516 ZNF202O95125 648 aa16.2■□□□□ 0.18
NEDD4L-223ENST00000588516 SCARF1Q14162 830 aa16.2■□□□□ 0.18
NEDD4L-223ENST00000588516 CCDC152Q4G0S7 254 aa16.2■□□□□ 0.18
NEDD4L-223ENST00000588516 DHX40Q8IX18 779 aaKnown RBP16.2■□□□□ 0.18
NEDD4L-223ENST00000588516 MPNDQ8N594 471 aa16.2■□□□□ 0.18
NEDD4L-223ENST00000588516 SPATA5Q8NB90 893 aa16.2■□□□□ 0.18
NEDD4L-223ENST00000588516 STRBPQ96SI9 672 aaKnown RBP16.2■□□□□ 0.18
NEDD4L-223ENST00000588516 CDC5LQ99459 802 aaKnown RBP16.2■□□□□ 0.18
NEDD4L-223ENST00000588516 OSBPL5Q9H0X9 879 aaPredicted RBP16.2■□□□□ 0.18
NEDD4L-223ENST00000588516 NAPBQ9H115 298 aa16.2■□□□□ 0.18
NEDD4L-223ENST00000588516 PRDM10Q9NQV6 1147 aa16.2■□□□□ 0.18
NEDD4L-223ENST00000588516 CEP131Q9UPN4 1083 aa16.2■□□□□ 0.18
NEDD4L-223ENST00000588516 GLTPD2A6NH11 291 aa16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 GOLGA8AA7E2F4 631 aa16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 FGFR2P21802 821 aa16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 CHRNA5P30532 468 aa16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 IGHMBP2P38935 993 aaKnown RBP16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 RASSF7Q02833 373 aa16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 SLFNL1Q499Z3 407 aa16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 TMEM67Q5HYA8 995 aa16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 APOA5Q6Q788 366 aa16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 OLFM4Q6UX06 510 aa16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 C11orf57Q6ZUT1 292 aaPredicted RBP16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 UTP14AQ9BVJ6 771 aaKnown RBP16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 CCDC94Q9BW85 323 aaPredicted RBP16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 GNL3LQ9NVN8 582 aaKnown RBP16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 DACH1Q9UI36 760 aa16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 SLC12A7Q9Y666 1083 aa16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 CLIC4Q9Y696 253 aa16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 BRCA1P38398 1863 aaKnown RBP16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 ZC3H4Q9UPT8 1303 aaKnown RBP16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 A0A1B0GVL5 298 aa16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 CTIFO43310 598 aaKnown RBP16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 POLR3DP05423 398 aaPredicted RBP16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 TNNT1P13805 278 aa16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 GPTP24298 496 aa16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 U2AF2P26368 475 aaKnown RBP eCLIP16.19■□□□□ 0.185e-25■■■□□ 18.9
NEDD4L-223ENST00000588516 SYKP43405 635 aa16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 NDUFA8P51970 172 aa16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 HLFQ16534 295 aa16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 KRT40Q6A162 431 aa16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 KANK3Q6NY19 840 aa16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 MFSD6Q6ZSS7 791 aa16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 AOPEPQ8N6M6 819 aa16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 CCDC112Q8NEF3 446 aa16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 PIH1D3Q9NQM4 214 aaKnown RBP16.19■□□□□ 0.18
NEDD4L-223ENST00000588516 TCRBV5S4A2TA0A5A2 114 aa16.18■□□□□ 0.18
NEDD4L-223ENST00000588516 IFIT3O14879 490 aaKnown RBP16.18■□□□□ 0.18
NEDD4L-223ENST00000588516 RGL2O15211 777 aa16.18■□□□□ 0.18
NEDD4L-223ENST00000588516 PCP11498 1178 aaKnown RBP16.18■□□□□ 0.18
NEDD4L-223ENST00000588516 SKILP12757 684 aa16.18■□□□□ 0.18
NEDD4L-223ENST00000588516 IFNAR1P17181 557 aa16.18■□□□□ 0.18
NEDD4L-223ENST00000588516 XBP1P17861 261 aa16.18■□□□□ 0.18
NEDD4L-223ENST00000588516 NT5C2P49902 561 aa16.18■□□□□ 0.18
NEDD4L-223ENST00000588516 PTPN14Q15678 1187 aa16.18■□□□□ 0.18
NEDD4L-223ENST00000588516 CT47A1Q5JQC4 288 aaPredicted RBP16.18■□□□□ 0.18
NEDD4L-223ENST00000588516 AKNAD1Q5T1N1 836 aa16.18■□□□□ 0.18
NEDD4L-223ENST00000588516 IFNL3Q8IZI9 196 aa16.18■□□□□ 0.18
NEDD4L-223ENST00000588516 CACTINQ8WUQ7 758 aaKnown RBP16.18■□□□□ 0.18
NEDD4L-223ENST00000588516 CCDC85AQ96PX6 553 aaPredicted RBP16.18■□□□□ 0.18
NEDD4L-223ENST00000588516 ZNF652Q9Y2D9 606 aa16.18■□□□□ 0.18
NEDD4L-223ENST00000588516 MORC2Q9Y6X9 1032 aaPredicted RBP16.18■□□□□ 0.18
NEDD4L-223ENST00000588516 DOCK2Q92608 1830 aa16.17■□□□□ 0.18
NEDD4L-223ENST00000588516 TIAM2Q8IVF5 1701 aa16.17■□□□□ 0.18
NEDD4L-223ENST00000588516 RIOK3O14730 519 aaKnown RBP16.17■□□□□ 0.18
NEDD4L-223ENST00000588516 IGSF3O75054 1194 aa16.17■□□□□ 0.18
NEDD4L-223ENST00000588516 FMNL1O95466 1100 aaPredicted RBP16.17■□□□□ 0.18
NEDD4L-223ENST00000588516 PFKFB1P16118 471 aa16.17■□□□□ 0.18
NEDD4L-223ENST00000588516 CTCFP49711 727 aaPredicted RBP16.17■□□□□ 0.18
NEDD4L-223ENST00000588516 AXDND1Q5T1B0 1012 aaPredicted RBP16.17■□□□□ 0.18
NEDD4L-223ENST00000588516 CEP135Q66GS9 1140 aa16.17■□□□□ 0.18
NEDD4L-223ENST00000588516 VPS37DQ86XT2 251 aa16.17■□□□□ 0.18
NEDD4L-223ENST00000588516 IGDCC4Q8TDY8 1250 aa16.17■□□□□ 0.18
NEDD4L-223ENST00000588516 STAG1Q8WVM7 1258 aa16.17■□□□□ 0.18
NEDD4L-223ENST00000588516 CREBZFQ9NS37 354 aa16.17■□□□□ 0.18
NEDD4L-223ENST00000588516 RPS6KA4O75676 772 aa16.16■□□□□ 0.18
NEDD4L-223ENST00000588516 BMP15O95972 392 aa16.16■□□□□ 0.18
NEDD4L-223ENST00000588516 LMNB1P20700 586 aa16.16■□□□□ 0.18
NEDD4L-223ENST00000588516 PHKA1P46020 1223 aa16.16■□□□□ 0.18
NEDD4L-223ENST00000588516 RILPL1Q5EBL4 403 aa16.16■□□□□ 0.18
NEDD4L-223ENST00000588516 C17orf53Q8N3J3 647 aaPredicted RBP16.16■□□□□ 0.18
NEDD4L-223ENST00000588516 FTOQ9C0B1 505 aaKnown RBP eCLIP16.16■□□□□ 0.18
NEDD4L-223ENST00000588516 FOXP1Q9H334 677 aaPredicted RBP16.16■□□□□ 0.18
NEDD4L-223ENST00000588516 LY9Q9HBG7 655 aa16.16■□□□□ 0.18
NEDD4L-223ENST00000588516 NRBP1Q9UHY1 535 aa16.16■□□□□ 0.18
NEDD4L-223ENST00000588516 TUBE1Q9UJT0 475 aa16.16■□□□□ 0.18
NEDD4L-223ENST00000588516 SBF1O95248 1867 aa16.16■□□□□ 0.18
NEDD4L-223ENST00000588516 B4E1Z4 1266 aa16.15■□□□□ 0.18
NEDD4L-223ENST00000588516 DEXIO95424 95 aa16.15■□□□□ 0.18
NEDD4L-223ENST00000588516 EIF5P55010 431 aaKnown RBP16.15■□□□□ 0.18
NEDD4L-223ENST00000588516 RC3H1Q5TC82 1133 aaKnown RBP16.15■□□□□ 0.18
NEDD4L-223ENST00000588516 RESP18Q5W5W9 173 aa16.15■□□□□ 0.18
NEDD4L-223ENST00000588516 CYB5R4Q7L1T6 521 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms