RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 TBC1D12O60347 775 aa20.67■□□□□ 0.9
LINC01842-201ENST00000588275 UQCRFS1P1P0C7P4 283 aa20.67■□□□□ 0.9
LINC01842-201ENST00000588275 FLT3LGP49771 235 aa20.67■□□□□ 0.9
LINC01842-201ENST00000588275 TTC39AQ5SRH9 613 aa20.67■□□□□ 0.9
LINC01842-201ENST00000588275 TMEM57Q8N5G2 664 aa20.67■□□□□ 0.9
LINC01842-201ENST00000588275 ANKRD13CQ8N6S4 541 aa20.67■□□□□ 0.9
LINC01842-201ENST00000588275 MAST2Q6P0Q8 1798 aa20.67■□□□□ 0.9
LINC01842-201ENST00000588275 NPM3O75607 178 aaKnown RBP20.66■□□□□ 0.9
LINC01842-201ENST00000588275 GJB1P08034 283 aa20.66■□□□□ 0.9
LINC01842-201ENST00000588275 ELNP15502 786 aa20.66■□□□□ 0.9
LINC01842-201ENST00000588275 GJA8P48165 433 aa20.66■□□□□ 0.9
LINC01842-201ENST00000588275 SPP2Q13103 211 aa20.66■□□□□ 0.9
LINC01842-201ENST00000588275 SH3RF3Q8TEJ3 882 aaPredicted RBP20.66■□□□□ 0.9
LINC01842-201ENST00000588275 UNC93B1Q9H1C4 597 aa20.66■□□□□ 0.9
LINC01842-201ENST00000588275 PNMA3Q9UL41 463 aa20.66■□□□□ 0.9
LINC01842-201ENST00000588275 COL2A1P02458 1487 aaPredicted RBP20.65■□□□□ 0.9
LINC01842-201ENST00000588275 MAP4K4O95819 1239 aaPredicted RBP20.65■□□□□ 0.9
LINC01842-201ENST00000588275 ZKSCAN2Q63HK3 967 aa20.65■□□□□ 0.9
LINC01842-201ENST00000588275 AATFQ9NY61 560 aaKnown RBP eCLIP20.65■□□□□ 0.9
LINC01842-201ENST00000588275 LOC285556D6RIA3 1793 aa20.64■□□□□ 0.9
LINC01842-201ENST00000588275 INHAP05111 366 aa20.64■□□□□ 0.89
LINC01842-201ENST00000588275 FXR1P51114 621 aaKnown RBP eCLIP20.64■□□□□ 0.89
LINC01842-201ENST00000588275 HMGCS2P54868 508 aa20.64■□□□□ 0.89
LINC01842-201ENST00000588275 CCDC158Q5M9N0 1113 aa20.64■□□□□ 0.89
LINC01842-201ENST00000588275 NAA16Q6N069 864 aaPredicted RBP20.64■□□□□ 0.89
LINC01842-201ENST00000588275 ZNF280CQ8ND82 737 aa20.64■□□□□ 0.89
LINC01842-201ENST00000588275 U2AF1L4Q8WU68 220 aaKnown RBP20.64■□□□□ 0.89
LINC01842-201ENST00000588275 COA7Q96BR5 231 aa20.64■□□□□ 0.89
LINC01842-201ENST00000588275 DBNDD2Q9BQY9 259 aa20.64■□□□□ 0.89
LINC01842-201ENST00000588275 C1orf115Q9H7X2 142 aa20.64■□□□□ 0.89
LINC01842-201ENST00000588275 CAP2P40123 477 aa20.63■□□□□ 0.89
LINC01842-201ENST00000588275 RRP1BQ14684 758 aaKnown RBP20.63■□□□□ 0.89
LINC01842-201ENST00000588275 TNNI3KQ59H18 835 aa20.63■□□□□ 0.89
LINC01842-201ENST00000588275 CHRDL2Q6WN34 429 aa20.63■□□□□ 0.89
LINC01842-201ENST00000588275 PROCA1Q8NCQ7 364 aaPredicted RBP20.63■□□□□ 0.89
LINC01842-201ENST00000588275 HTATIP2Q9BUP3 242 aa20.63■□□□□ 0.89
LINC01842-201ENST00000588275 FPGT-TNNI3KV9GXZ4 949 aa20.63■□□□□ 0.89
LINC01842-201ENST00000588275 FARP2O94887 1054 aaPredicted RBP20.62■□□□□ 0.89
LINC01842-201ENST00000588275 BAG3O95817 575 aa20.62■□□□□ 0.89
LINC01842-201ENST00000588275 MAPKAPK5Q8IW41 473 aa20.62■□□□□ 0.89
LINC01842-201ENST00000588275 TRIM34Q9BYJ4 488 aa20.62■□□□□ 0.89
LINC01842-201ENST00000588275 AS3MTQ9HBK9 375 aa20.62■□□□□ 0.89
LINC01842-201ENST00000588275 HERC5Q9UII4 1024 aaKnown RBP20.62■□□□□ 0.89
LINC01842-201ENST00000588275 USP17L5A8MUK1 530 aa20.61■□□□□ 0.89
LINC01842-201ENST00000588275 SURF6O75683 361 aaKnown RBP20.61■□□□□ 0.89
LINC01842-201ENST00000588275 PABPC4Q13310 644 aaKnown RBP eCLIP20.61■□□□□ 0.89
LINC01842-201ENST00000588275 FAM110CQ1W6H9 321 aa20.61■□□□□ 0.89
LINC01842-201ENST00000588275 FTSJ3Q8IY81 847 aaKnown RBP20.61■□□□□ 0.89
LINC01842-201ENST00000588275 TGFBRAP1Q8WUH2 860 aa20.61■□□□□ 0.89
LINC01842-201ENST00000588275 TBC1D2Q9BYX2 928 aa20.61■□□□□ 0.89
LINC01842-201ENST00000588275 PI4KBQ9UBF8 816 aa20.61■□□□□ 0.89
LINC01842-201ENST00000588275 SIPA1L1O43166 1804 aa20.61■□□□□ 0.89
LINC01842-201ENST00000588275 DOCK3Q8IZD9 2030 aa20.61■□□□□ 0.89
LINC01842-201ENST00000588275 CDK5RAP2Q96SN8 1893 aa20.6■□□□□ 0.89
LINC01842-201ENST00000588275 MYO5AQ9Y4I1 1855 aaKnown RBP20.6■□□□□ 0.89
LINC01842-201ENST00000588275 PLCG2P16885 1265 aa20.6■□□□□ 0.89
LINC01842-201ENST00000588275 IRF5Q13568 498 aa20.6■□□□□ 0.89
LINC01842-201ENST00000588275 POLA2Q14181 598 aa20.6■□□□□ 0.89
LINC01842-201ENST00000588275 CRACR2BQ8N4Y2 399 aaPredicted RBP20.6■□□□□ 0.89
LINC01842-201ENST00000588275 PXYLP1Q8TE99 480 aa20.6■□□□□ 0.89
LINC01842-201ENST00000588275 DEFB118Q96PH6 123 aa20.6■□□□□ 0.89
LINC01842-201ENST00000588275 GPR108Q9NPR9 543 aa20.6■□□□□ 0.89
LINC01842-201ENST00000588275 TRIOBPQ9H2D6 2365 aa20.6■□□□□ 0.89
LINC01842-201ENST00000588275 FLT1P17948 1338 aa20.59■□□□□ 0.89
LINC01842-201ENST00000588275 SGPL1O95470 568 aa20.59■□□□□ 0.89
LINC01842-201ENST00000588275 TFRCP02786 760 aaKnown RBP20.59■□□□□ 0.89
LINC01842-201ENST00000588275 CYP2E1P05181 493 aaPredicted RBP20.59■□□□□ 0.89
LINC01842-201ENST00000588275 MTMR2Q13614 643 aa20.59■□□□□ 0.89
LINC01842-201ENST00000588275 ADGRA1Q86SQ6 560 aa20.59■□□□□ 0.89
LINC01842-201ENST00000588275 ITPRIPQ8IWB1 547 aa20.59■□□□□ 0.89
LINC01842-201ENST00000588275 SSH3Q8TE77 659 aa20.59■□□□□ 0.89
LINC01842-201ENST00000588275 ASCC2Q9H1I8 757 aaPredicted RBP20.59■□□□□ 0.89
LINC01842-201ENST00000588275 DHX36Q9H2U1 1008 aaKnown RBP20.59■□□□□ 0.89
LINC01842-201ENST00000588275 GDF11O95390 407 aa20.58■□□□□ 0.89
LINC01842-201ENST00000588275 ZAP70P43403 619 aa20.58■□□□□ 0.89
LINC01842-201ENST00000588275 GCLCP48506 637 aaPredicted RBP20.58■□□□□ 0.89
LINC01842-201ENST00000588275 ATP8B2P98198 1209 aa20.58■□□□□ 0.89
LINC01842-201ENST00000588275 UBE2Q1Q7Z7E8 422 aa20.58■□□□□ 0.89
LINC01842-201ENST00000588275 SAP30BPQ9UHR5 308 aaKnown RBP20.58■□□□□ 0.89
LINC01842-201ENST00000588275 FOCADQ5VW36 1801 aa20.57■□□□□ 0.88
LINC01842-201ENST00000588275 IRX3P78415 501 aaPredicted RBP20.57■□□□□ 0.88
LINC01842-201ENST00000588275 HNRNPUQ00839 825 aaKnown RBP eCLIP20.57■□□□□ 0.88
LINC01842-201ENST00000588275 CCDC8Q9H0W5 538 aaPredicted RBP20.57■□□□□ 0.88
LINC01842-201ENST00000588275 TLR7Q9NYK1 1049 aaKnown RBP20.57■□□□□ 0.88
LINC01842-201ENST00000588275 TMOD4Q9NZQ9 345 aa20.57■□□□□ 0.88
LINC01842-201ENST00000588275 PALD1Q9ULE6 856 aa20.57■□□□□ 0.88
LINC01842-201ENST00000588275 ASNSP08243 561 aa20.56■□□□□ 0.88
LINC01842-201ENST00000588275 SHROOM1Q2M3G4 852 aaPredicted RBP20.56■□□□□ 0.88
LINC01842-201ENST00000588275 SH3D19Q5HYK7 790 aa20.56■□□□□ 0.88
LINC01842-201ENST00000588275 DNAJC18Q9H819 358 aa20.56■□□□□ 0.88
LINC01842-201ENST00000588275 PIH1D3Q9NQM4 214 aaKnown RBP20.56■□□□□ 0.88
LINC01842-201ENST00000588275 DBNLQ9UJU6 430 aaKnown RBP20.56■□□□□ 0.88
LINC01842-201ENST00000588275 NR2E3Q9Y5X4 410 aa20.56■□□□□ 0.88
LINC01842-201ENST00000588275 IDH1O75874 414 aaKnown RBP20.55■□□□□ 0.88
LINC01842-201ENST00000588275 HLA-DOAP06340 250 aa20.55■□□□□ 0.88
LINC01842-201ENST00000588275 CYP7A1P22680 504 aa20.55■□□□□ 0.88
LINC01842-201ENST00000588275 PPP4CP60510 307 aa20.55■□□□□ 0.88
LINC01842-201ENST00000588275 DYNLL1P63167 89 aaKnown RBP20.55■□□□□ 0.88
LINC01842-201ENST00000588275 RBM27Q9P2N5 1060 aaKnown RBP20.55■□□□□ 0.88
LINC01842-201ENST00000588275 BACE1P56817 501 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms