RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 SMCR8Q8TEV9 937 aaPredicted RBP17.11■□□□□ 0.33
CLPTM1-208ENST00000588274 DIS3LQ8TF46 1054 aaKnown RBP17.11■□□□□ 0.33
CLPTM1-208ENST00000588274 DEFB118Q96PH6 123 aa17.11■□□□□ 0.33
CLPTM1-208ENST00000588274 API5Q9BZZ5 524 aaKnown RBP17.11■□□□□ 0.33
CLPTM1-208ENST00000588274 OSBPL5Q9H0X9 879 aaPredicted RBP17.11■□□□□ 0.33
CLPTM1-208ENST00000588274 FOCADQ5VW36 1801 aa17.1■□□□□ 0.33
CLPTM1-208ENST00000588274 CDK5RAP2Q96SN8 1893 aa17.1■□□□□ 0.33
CLPTM1-208ENST00000588274 ARID4AP29374 1257 aaPredicted RBP17.1■□□□□ 0.33
CLPTM1-208ENST00000588274 MVPQ14764 893 aaKnown RBP17.1■□□□□ 0.33
CLPTM1-208ENST00000588274 GJD2Q9UKL4 321 aa17.1■□□□□ 0.33
CLPTM1-208ENST00000588274 A0A0C4DFX4 3053 aa17.1■□□□□ 0.33
CLPTM1-208ENST00000588274 A0A1W2PPC1 479 aa17.09■□□□□ 0.33
CLPTM1-208ENST00000588274 SRGAP3O43295 1099 aa17.09■□□□□ 0.33
CLPTM1-208ENST00000588274 RARSP54136 660 aaKnown RBP17.09■□□□□ 0.33
CLPTM1-208ENST00000588274 JAG1P78504 1218 aa17.09■□□□□ 0.33
CLPTM1-208ENST00000588274 SH3D19Q5HYK7 790 aa17.09■□□□□ 0.33
CLPTM1-208ENST00000588274 SPTY2D1Q68D10 685 aaPredicted RBP17.09■□□□□ 0.33
CLPTM1-208ENST00000588274 TBC1D9Q6ZT07 1266 aa17.09■□□□□ 0.33
CLPTM1-208ENST00000588274 SLF2Q8IX21 1173 aa17.09■□□□□ 0.33
CLPTM1-208ENST00000588274 DNAJC18Q9H819 358 aa17.09■□□□□ 0.33
CLPTM1-208ENST00000588274 DDX60LQ5H9U9 1706 aaKnown RBP17.09■□□□□ 0.33
CLPTM1-208ENST00000588274 CAP2P40123 477 aa17.08■□□□□ 0.32
CLPTM1-208ENST00000588274 MCAMP43121 646 aa17.08■□□□□ 0.32
CLPTM1-208ENST00000588274 HMGCS2P54868 508 aa17.08■□□□□ 0.32
CLPTM1-208ENST00000588274 TRIM32Q13049 653 aa17.08■□□□□ 0.32
CLPTM1-208ENST00000588274 SPP2Q13103 211 aa17.08■□□□□ 0.32
CLPTM1-208ENST00000588274 ERICH6Q7L0X2 663 aa17.08■□□□□ 0.32
CLPTM1-208ENST00000588274 SPATA5Q8NB90 893 aa17.08■□□□□ 0.32
CLPTM1-208ENST00000588274 ZNF280CQ8ND82 737 aa17.08■□□□□ 0.32
CLPTM1-208ENST00000588274 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.08■□□□□ 0.32
CLPTM1-208ENST00000588274 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.08■□□□□ 0.32
CLPTM1-208ENST00000588274 TNNQ9UQP3 1299 aa17.08■□□□□ 0.32
CLPTM1-208ENST00000588274 NR2E3Q9Y5X4 410 aa17.08■□□□□ 0.32
CLPTM1-208ENST00000588274 MAP4K4O95819 1239 aaPredicted RBP17.07■□□□□ 0.32
CLPTM1-208ENST00000588274 SHROOM1Q2M3G4 852 aaPredicted RBP17.07■□□□□ 0.32
CLPTM1-208ENST00000588274 POTEEQ6S8J3 1075 aa17.07■□□□□ 0.32
CLPTM1-208ENST00000588274 PAWRQ96IZ0 340 aaKnown RBP17.07■□□□□ 0.32
CLPTM1-208ENST00000588274 ASCC2Q9H1I8 757 aaPredicted RBP17.07■□□□□ 0.32
CLPTM1-208ENST00000588274 MORF4L1Q9UBU8 362 aa17.07■□□□□ 0.32
CLPTM1-208ENST00000588274 PNMA3Q9UL41 463 aa17.07■□□□□ 0.32
CLPTM1-208ENST00000588274 AKAP2Q9Y2D5 859 aa17.07■□□□□ 0.32
CLPTM1-208ENST00000588274 PNMA6EA0A0J9YXQ4 647 aa17.06■□□□□ 0.32
CLPTM1-208ENST00000588274 CAPN2P17655 700 aa17.06■□□□□ 0.32
CLPTM1-208ENST00000588274 MAP3K21Q5TCX8 1036 aa17.06■□□□□ 0.32
CLPTM1-208ENST00000588274 ADGRA1Q86SQ6 560 aa17.06■□□□□ 0.32
CLPTM1-208ENST00000588274 METTL16Q86W50 562 aaKnown RBP17.06■□□□□ 0.32
CLPTM1-208ENST00000588274 SH3RF3Q8TEJ3 882 aaPredicted RBP17.06■□□□□ 0.32
CLPTM1-208ENST00000588274 TRIB2Q92519 343 aa17.06■□□□□ 0.32
CLPTM1-208ENST00000588274 ARHGAP45Q92619 1136 aa17.06■□□□□ 0.32
CLPTM1-208ENST00000588274 COA7Q96BR5 231 aa17.06■□□□□ 0.32
CLPTM1-208ENST00000588274 LRCH3Q96II8 777 aa17.06■□□□□ 0.32
CLPTM1-208ENST00000588274 LAMA2P24043 3122 aaKnown RBP17.05■□□□□ 0.32
CLPTM1-208ENST00000588274 EVI5O60447 810 aa17.05■□□□□ 0.32
CLPTM1-208ENST00000588274 PEX10O60683 326 aa17.05■□□□□ 0.32
CLPTM1-208ENST00000588274 TFRCP02786 760 aaKnown RBP17.05■□□□□ 0.32
CLPTM1-208ENST00000588274 HMGCRP04035 888 aa17.05■□□□□ 0.32
CLPTM1-208ENST00000588274 GNAI3P08754 354 aa17.05■□□□□ 0.32
CLPTM1-208ENST00000588274 GCLCP48506 637 aaPredicted RBP17.05■□□□□ 0.32
CLPTM1-208ENST00000588274 GDF15Q99988 308 aa17.05■□□□□ 0.32
CLPTM1-208ENST00000588274 TBC1D2Q9BYX2 928 aa17.05■□□□□ 0.32
CLPTM1-208ENST00000588274 TXNRD2Q9NNW7 524 aa17.05■□□□□ 0.32
CLPTM1-208ENST00000588274 HDAC5Q9UQL6 1122 aa17.05■□□□□ 0.32
CLPTM1-208ENST00000588274 TRIM27P14373 513 aa17.04■□□□□ 0.32
CLPTM1-208ENST00000588274 ANKLE1Q8NAG6 615 aa17.04■□□□□ 0.32
CLPTM1-208ENST00000588274 WDR18Q9BV38 432 aa17.04■□□□□ 0.32
CLPTM1-208ENST00000588274 STAP2Q9UGK3 403 aa17.04■□□□□ 0.32
CLPTM1-208ENST00000588274 HERC5Q9UII4 1024 aaKnown RBP17.04■□□□□ 0.32
CLPTM1-208ENST00000588274 DNAH12Q6ZR08 3092 aa17.04■□□□□ 0.32
CLPTM1-208ENST00000588274 MYO5AQ9Y4I1 1855 aaKnown RBP17.03■□□□□ 0.32
CLPTM1-208ENST00000588274 FLT1P17948 1338 aa17.03■□□□□ 0.32
CLPTM1-208ENST00000588274 USP17L5A8MUK1 530 aa17.03■□□□□ 0.32
CLPTM1-208ENST00000588274 GSTO1P78417 241 aa17.03■□□□□ 0.32
CLPTM1-208ENST00000588274 MTMR2Q13614 643 aa17.03■□□□□ 0.32
CLPTM1-208ENST00000588274 TEX11Q8IYF3 940 aa17.03■□□□□ 0.32
CLPTM1-208ENST00000588274 TAOK2Q9UL54 1235 aa17.03■□□□□ 0.32
CLPTM1-208ENST00000588274 UNC80Q8N2C7 3258 aa17.02■□□□□ 0.32
CLPTM1-208ENST00000588274 PFASO15067 1338 aa17.02■□□□□ 0.32
CLPTM1-208ENST00000588274 RPTORQ8N122 1335 aa17.02■□□□□ 0.32
CLPTM1-208ENST00000588274 HOXA7P31268 230 aaPredicted RBP17.02■□□□□ 0.32
CLPTM1-208ENST00000588274 NECAB2Q7Z6G3 386 aa17.02■□□□□ 0.32
CLPTM1-208ENST00000588274 NEUROD6Q96NK8 337 aa17.02■□□□□ 0.32
CLPTM1-208ENST00000588274 RAI14Q9P0K7 980 aa17.02■□□□□ 0.32
CLPTM1-208ENST00000588274 OGDHLQ9ULD0 1010 aa17.02■□□□□ 0.32
CLPTM1-208ENST00000588274 LDHCP07864 332 aa17.01■□□□□ 0.31
CLPTM1-208ENST00000588274 BMP8BP34820 402 aa17.01■□□□□ 0.31
CLPTM1-208ENST00000588274 BACE1P56817 501 aa17.01■□□□□ 0.31
CLPTM1-208ENST00000588274 PPP4CP60510 307 aa17.01■□□□□ 0.31
CLPTM1-208ENST00000588274 USP6NLQ92738 828 aa17.01■□□□□ 0.31
CLPTM1-208ENST00000588274 PI4KBQ9UBF8 816 aa17.01■□□□□ 0.31
CLPTM1-208ENST00000588274 FRMPD3Q5JV73 1810 aa17■□□□□ 0.31
CLPTM1-208ENST00000588274 CYP2E1P05181 493 aaPredicted RBP17■□□□□ 0.31
CLPTM1-208ENST00000588274 PABPC4Q13310 644 aaKnown RBP eCLIP17■□□□□ 0.31
CLPTM1-208ENST00000588274 POLA2Q14181 598 aa17■□□□□ 0.31
CLPTM1-208ENST00000588274 C7orf61Q8IZ16 206 aa17■□□□□ 0.31
CLPTM1-208ENST00000588274 P2RX7Q99572 595 aaKnown RBP17■□□□□ 0.31
CLPTM1-208ENST00000588274 AATFQ9NY61 560 aaKnown RBP eCLIP17■□□□□ 0.31
CLPTM1-208ENST00000588274 RBPJLQ9UBG7 517 aa17■□□□□ 0.31
CLPTM1-208ENST00000588274 COL6A1P12109 1028 aa16.99■□□□□ 0.31
CLPTM1-208ENST00000588274 HERVK_113P62684 666 aa16.99■□□□□ 0.31
CLPTM1-208ENST00000588274 DBNDD2Q9BQY9 259 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms