RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 SMIM22K7EJ46 135 aa16.74■□□□□ 0.27
CCDC130-208ENST00000588071 POTEIP0CG38 1075 aa16.74■□□□□ 0.27
CCDC130-208ENST00000588071 POTEJP0CG39 1038 aa16.74■□□□□ 0.27
CCDC130-208ENST00000588071 RBM25P49756 843 aaKnown RBP16.74■□□□□ 0.27
CCDC130-208ENST00000588071 EVX2Q03828 476 aa16.74■□□□□ 0.27
CCDC130-208ENST00000588071 TRDNQ13061 729 aa16.74■□□□□ 0.27
CCDC130-208ENST00000588071 KRT32Q14532 448 aa16.74■□□□□ 0.27
CCDC130-208ENST00000588071 TSGA10IPQ3SY00 556 aa16.74■□□□□ 0.27
CCDC130-208ENST00000588071 CDC37L1Q7L3B6 337 aa16.74■□□□□ 0.27
CCDC130-208ENST00000588071 DYNLL2Q96FJ2 89 aa16.74■□□□□ 0.27
CCDC130-208ENST00000588071 MKNK2Q9HBH9 465 aa16.74■□□□□ 0.27
CCDC130-208ENST00000588071 TOMM22Q9NS69 142 aa16.74■□□□□ 0.27
CCDC130-208ENST00000588071 SNX14Q9Y5W7 946 aa16.74■□□□□ 0.27
CCDC130-208ENST00000588071 ATRNL1Q5VV63 1379 aa16.74■□□□□ 0.27
CCDC130-208ENST00000588071 COL2A1P02458 1487 aaPredicted RBP16.73■□□□□ 0.27
CCDC130-208ENST00000588071 ADM5C9JUS6 153 aa16.73■□□□□ 0.27
CCDC130-208ENST00000588071 E7EWF7 191 aa16.73■□□□□ 0.27
CCDC130-208ENST00000588071 PSMA5P28066 241 aa16.73■□□□□ 0.27
CCDC130-208ENST00000588071 CDK8P49336 464 aa16.73■□□□□ 0.27
CCDC130-208ENST00000588071 ANAPC15P60006 121 aa16.73■□□□□ 0.27
CCDC130-208ENST00000588071 SUPT20HL1Q3ZLR7 823 aa16.73■□□□□ 0.27
CCDC130-208ENST00000588071 RRP12Q5JTH9 1297 aaKnown RBP16.73■□□□□ 0.27
CCDC130-208ENST00000588071 PRAMEF18Q5VWM3 479 aa16.73■□□□□ 0.27
CCDC130-208ENST00000588071 MAP1SQ66K74 1059 aaPredicted RBP16.73■□□□□ 0.27
CCDC130-208ENST00000588071 STAG1Q8WVM7 1258 aa16.73■□□□□ 0.27
CCDC130-208ENST00000588071 HOOK2Q96ED9 719 aa16.73■□□□□ 0.27
CCDC130-208ENST00000588071 TEPSINQ96N21 525 aa16.73■□□□□ 0.27
CCDC130-208ENST00000588071 TBC1D32Q96NH3 1257 aa16.73■□□□□ 0.27
CCDC130-208ENST00000588071 NBPF3Q9H094 633 aa16.73■□□□□ 0.27
CCDC130-208ENST00000588071 EHD4Q9H223 541 aa16.73■□□□□ 0.27
CCDC130-208ENST00000588071 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.73■□□□□ 0.27
CCDC130-208ENST00000588071 INCENPQ9NQS7 918 aa16.73■□□□□ 0.27
CCDC130-208ENST00000588071 SWAP70Q9UH65 585 aa16.73■□□□□ 0.27
CCDC130-208ENST00000588071 PCP11498 1178 aaKnown RBP16.72■□□□□ 0.27
CCDC130-208ENST00000588071 NBPF12Q5TAG4 269 aaPredicted RBP16.72■□□□□ 0.27
CCDC130-208ENST00000588071 C16orf86Q6ZW13 317 aa16.72■□□□□ 0.27
CCDC130-208ENST00000588071 MIGA2Q7L4E1 593 aa16.72■□□□□ 0.27
CCDC130-208ENST00000588071 RALYLQ86SE5 291 aaKnown RBP16.72■□□□□ 0.27
CCDC130-208ENST00000588071 TBC1D10CQ8IV04 446 aa16.72■□□□□ 0.27
CCDC130-208ENST00000588071 ZNF444Q8N0Y2 327 aaPredicted RBP16.72■□□□□ 0.27
CCDC130-208ENST00000588071 NCOA7Q8NI08 942 aa16.72■□□□□ 0.27
CCDC130-208ENST00000588071 GLIS2Q9BZE0 524 aaPredicted RBP16.72■□□□□ 0.27
CCDC130-208ENST00000588071 KRT23Q9C075 422 aa16.72■□□□□ 0.27
CCDC130-208ENST00000588071 PRDM1O75626 825 aa16.71■□□□□ 0.27
CCDC130-208ENST00000588071 GABPAQ06546 454 aa16.71■□□□□ 0.27
CCDC130-208ENST00000588071 DCAF15Q66K64 600 aa16.71■□□□□ 0.27
CCDC130-208ENST00000588071 CDAN1Q8IWY9 1227 aa16.71■□□□□ 0.27
CCDC130-208ENST00000588071 JAKMIP1Q96N16 626 aaKnown RBP16.71■□□□□ 0.27
CCDC130-208ENST00000588071 NEK1Q96PY6 1258 aa16.71■□□□□ 0.27
CCDC130-208ENST00000588071 CNNM2Q9H8M5 875 aa16.71■□□□□ 0.27
CCDC130-208ENST00000588071 HERC5Q9UII4 1024 aaKnown RBP16.71■□□□□ 0.27
CCDC130-208ENST00000588071 TAOK2Q9UL54 1235 aa16.71■□□□□ 0.27
CCDC130-208ENST00000588071 TAF6LQ9Y6J9 622 aa16.71■□□□□ 0.27
CCDC130-208ENST00000588071 SIPA1L1O43166 1804 aa16.7■□□□□ 0.26
CCDC130-208ENST00000588071 ROBO3Q96MS0 1386 aa16.7■□□□□ 0.26
CCDC130-208ENST00000588071 TBC1D12O60347 775 aa16.7■□□□□ 0.26
CCDC130-208ENST00000588071 RANBP6O60518 1105 aaKnown RBP16.7■□□□□ 0.26
CCDC130-208ENST00000588071 FGRP09769 529 aa16.7■□□□□ 0.26
CCDC130-208ENST00000588071 NF2P35240 595 aa16.7■□□□□ 0.26
CCDC130-208ENST00000588071 ADCK5Q3MIX3 580 aa16.7■□□□□ 0.26
CCDC130-208ENST00000588071 STOX1Q6ZVD7 989 aa16.7■□□□□ 0.26
CCDC130-208ENST00000588071 SLC44A5Q8NCS7 719 aa16.7■□□□□ 0.26
CCDC130-208ENST00000588071 FAM196BA6NMK8 535 aa16.69■□□□□ 0.26
CCDC130-208ENST00000588071 B4E1Z4 1266 aa16.69■□□□□ 0.26
CCDC130-208ENST00000588071 ORC4O43929 436 aa16.69■□□□□ 0.26
CCDC130-208ENST00000588071 HMGB1P09429 215 aaKnown RBP16.69■□□□□ 0.26
CCDC130-208ENST00000588071 SLURP2P0DP57 97 aa16.69■□□□□ 0.26
CCDC130-208ENST00000588071 CERKLQ49MI3 558 aaPredicted RBP16.69■□□□□ 0.26
CCDC130-208ENST00000588071 CHADLQ6NUI6 762 aa16.69■□□□□ 0.26
CCDC130-208ENST00000588071 BLOC1S2Q6QNY1 142 aa16.69■□□□□ 0.26
CCDC130-208ENST00000588071 DLK2Q6UY11 383 aa16.69■□□□□ 0.26
CCDC130-208ENST00000588071 METTL16Q86W50 562 aaKnown RBP16.69■□□□□ 0.26
CCDC130-208ENST00000588071 ESR2Q92731 530 aa16.69■□□□□ 0.26
CCDC130-208ENST00000588071 CDCA5Q96FF9 252 aa16.69■□□□□ 0.26
CCDC130-208ENST00000588071 TACC3Q9Y6A5 838 aa16.69■□□□□ 0.26
CCDC130-208ENST00000588071 NEDD4P46934 1319 aa16.69■□□□□ 0.26
CCDC130-208ENST00000588071 KDM4AO75164 1064 aa16.68■□□□□ 0.26
CCDC130-208ENST00000588071 CASTP20810 708 aaKnown RBP16.68■□□□□ 0.26
CCDC130-208ENST00000588071 SHMT1P34896 483 aa16.68■□□□□ 0.26
CCDC130-208ENST00000588071 FAM47AQ5JRC9 791 aa16.68■□□□□ 0.26
CCDC130-208ENST00000588071 ZNF341Q9BYN7 854 aa16.68■□□□□ 0.26
CCDC130-208ENST00000588071 TM6SF1Q9BZW5 370 aa16.68■□□□□ 0.26
CCDC130-208ENST00000588071 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.68■□□□□ 0.26
CCDC130-208ENST00000588071 CYP46A1Q9Y6A2 500 aa16.68■□□□□ 0.26
CCDC130-208ENST00000588071 TSPY2A6NKD2 308 aa16.67■□□□□ 0.26
CCDC130-208ENST00000588071 MPHOSPH10O00566 681 aaKnown RBP16.67■□□□□ 0.26
CCDC130-208ENST00000588071 KIF3CO14782 793 aa16.67■□□□□ 0.26
CCDC130-208ENST00000588071 TSPY3P0CV98 308 aa16.67■□□□□ 0.26
CCDC130-208ENST00000588071 TSPY8P0CW00 308 aa16.67■□□□□ 0.26
CCDC130-208ENST00000588071 MCM5P33992 734 aa16.67■□□□□ 0.26
CCDC130-208ENST00000588071 TFAP4Q01664 338 aa16.67■□□□□ 0.26
CCDC130-208ENST00000588071 MAP3K10Q02779 954 aa16.67■□□□□ 0.26
CCDC130-208ENST00000588071 PRKG1Q13976 671 aa16.67■□□□□ 0.26
CCDC130-208ENST00000588071 DHX32Q7L7V1 743 aaKnown RBP16.67■□□□□ 0.26
CCDC130-208ENST00000588071 IL17RAQ96F46 866 aa16.67■□□□□ 0.26
CCDC130-208ENST00000588071 DNAJC18Q9H819 358 aa16.67■□□□□ 0.26
CCDC130-208ENST00000588071 ZSWIM5Q9P217 1185 aa16.67■□□□□ 0.26
CCDC130-208ENST00000588071 PPP1R12BO60237 982 aaPredicted RBP16.66■□□□□ 0.26
CCDC130-208ENST00000588071 RASA1P20936 1047 aa16.66■□□□□ 0.26
CCDC130-208ENST00000588071 NT5C2P49902 561 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms