RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 ATP2B4P23634 1241 aa11.14□□□□□ -0.63
LINC01539-201ENST00000587904 KLRK1P26718 216 aa11.14□□□□□ -0.63
LINC01539-201ENST00000587904 KRT85P78386 507 aa11.14□□□□□ -0.63
LINC01539-201ENST00000587904 DDR1Q08345 913 aa11.14□□□□□ -0.63
LINC01539-201ENST00000587904 CDC37L1Q7L3B6 337 aa11.14□□□□□ -0.63
LINC01539-201ENST00000587904 WDR66Q8TBY9 1149 aa11.14□□□□□ -0.63
LINC01539-201ENST00000587904 RIOK1Q9BRS2 568 aaKnown RBP11.14□□□□□ -0.63
LINC01539-201ENST00000587904 ZSCAN16Q9H4T2 348 aaPredicted RBP11.14□□□□□ -0.63
LINC01539-201ENST00000587904 TFCP2L1Q9NZI6 479 aa11.14□□□□□ -0.63
LINC01539-201ENST00000587904 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.14□□□□□ -0.63
LINC01539-201ENST00000587904 SMTNL1A8MU46 457 aa11.13□□□□□ -0.63
LINC01539-201ENST00000587904 H3BQV1 296 aa11.13□□□□□ -0.63
LINC01539-201ENST00000587904 SH2B2O14492 632 aaPredicted RBP11.13□□□□□ -0.63
LINC01539-201ENST00000587904 LIFRP42702 1097 aa11.13□□□□□ -0.63
LINC01539-201ENST00000587904 UBE2HP62256 183 aa11.13□□□□□ -0.63
LINC01539-201ENST00000587904 IFFO2Q5TF58 517 aa11.13□□□□□ -0.63
LINC01539-201ENST00000587904 MFSD6Q6ZSS7 791 aa11.13□□□□□ -0.63
LINC01539-201ENST00000587904 CHST3Q7LGC8 479 aa11.13□□□□□ -0.63
LINC01539-201ENST00000587904 CCDC91Q7Z6B0 441 aa11.13□□□□□ -0.63
LINC01539-201ENST00000587904 NBPF11Q86T75 865 aa11.13□□□□□ -0.63
LINC01539-201ENST00000587904 USP48Q86UV5 1035 aa11.13□□□□□ -0.63
LINC01539-201ENST00000587904 NSUN4Q96CB9 384 aaKnown RBP11.13□□□□□ -0.63
LINC01539-201ENST00000587904 NOL10Q9BSC4 688 aaKnown RBP11.13□□□□□ -0.63
LINC01539-201ENST00000587904 ELP1O95163 1332 aa11.13□□□□□ -0.63
LINC01539-201ENST00000587904 NEDD4P46934 1319 aa11.13□□□□□ -0.63
LINC01539-201ENST00000587904 LTBP1Q14766 1721 aa11.13□□□□□ -0.63
LINC01539-201ENST00000587904 WTIPA6NIX2 430 aaPredicted RBP11.13□□□□□ -0.63
LINC01539-201ENST00000587904 CTDNEP1O95476 244 aa11.13□□□□□ -0.63
LINC01539-201ENST00000587904 APBA3O96018 575 aa11.13□□□□□ -0.63
LINC01539-201ENST00000587904 CALRP27797 417 aaKnown RBP11.13□□□□□ -0.63
LINC01539-201ENST00000587904 NT5C2P49902 561 aa11.13□□□□□ -0.63
LINC01539-201ENST00000587904 SETQ01105 290 aaPredicted RBP11.13□□□□□ -0.63
LINC01539-201ENST00000587904 SART3Q15020 963 aaKnown RBP11.13□□□□□ -0.63
LINC01539-201ENST00000587904 ADGRA1Q86SQ6 560 aa11.13□□□□□ -0.63
LINC01539-201ENST00000587904 SGMS1Q86VZ5 419 aa11.13□□□□□ -0.63
LINC01539-201ENST00000587904 MIGA1Q8NAN2 632 aa11.13□□□□□ -0.63
LINC01539-201ENST00000587904 CNPY2Q9Y2B0 182 aa11.13□□□□□ -0.63
LINC01539-201ENST00000587904 NID2Q14112 1375 aa11.13□□□□□ -0.63
LINC01539-201ENST00000587904 LAMB1P07942 1786 aa11.13□□□□□ -0.63
LINC01539-201ENST00000587904 CDKL5O76039 1030 aa11.12□□□□□ -0.63
LINC01539-201ENST00000587904 RCAN1P53805 252 aa11.12□□□□□ -0.63
LINC01539-201ENST00000587904 GSCP56915 257 aaPredicted RBP11.12□□□□□ -0.63
LINC01539-201ENST00000587904 CCT2P78371 535 aaKnown RBP11.12□□□□□ -0.63
LINC01539-201ENST00000587904 MECOMQ03112 1051 aa11.12□□□□□ -0.63
LINC01539-201ENST00000587904 ZNF827Q17R98 1081 aa11.12□□□□□ -0.63
LINC01539-201ENST00000587904 NBPF9Q3BBW0 867 aa11.12□□□□□ -0.63
LINC01539-201ENST00000587904 TDRD7Q8NHU6 1098 aaKnown RBP11.12□□□□□ -0.63
LINC01539-201ENST00000587904 KIAA1524Q8TCG1 905 aa11.12□□□□□ -0.63
LINC01539-201ENST00000587904 CHAMP1Q96JM3 812 aa11.12□□□□□ -0.63
LINC01539-201ENST00000587904 TRERF1Q96PN7 1200 aa11.12□□□□□ -0.63
LINC01539-201ENST00000587904 SCAND2PQ9GZW5 306 aaPredicted RBP11.12□□□□□ -0.63
LINC01539-201ENST00000587904 CWC15Q9P013 229 aaKnown RBP11.12□□□□□ -0.63
LINC01539-201ENST00000587904 JRKLQ9Y4A0 524 aa11.12□□□□□ -0.63
LINC01539-201ENST00000587904 ANKRD31Q8N7Z5 1873 aa11.12□□□□□ -0.63
LINC01539-201ENST00000587904 B4E1Z4 1266 aa11.12□□□□□ -0.63
LINC01539-201ENST00000587904 PRKAB2O43741 272 aa11.12□□□□□ -0.63
LINC01539-201ENST00000587904 GSTO1P78417 241 aa11.12□□□□□ -0.63
LINC01539-201ENST00000587904 DNM1Q05193 864 aaKnown RBP11.12□□□□□ -0.63
LINC01539-201ENST00000587904 PPARAQ07869 468 aa11.12□□□□□ -0.63
LINC01539-201ENST00000587904 SWT1Q5T5J6 900 aaKnown RBP11.12□□□□□ -0.63
LINC01539-201ENST00000587904 ATL3Q6DD88 541 aa11.12□□□□□ -0.63
LINC01539-201ENST00000587904 CPLX2Q6PUV4 134 aaKnown RBP11.12□□□□□ -0.63
LINC01539-201ENST00000587904 CYB5R4Q7L1T6 521 aa11.12□□□□□ -0.63
LINC01539-201ENST00000587904 RPAINQ86UA6 219 aa11.12□□□□□ -0.63
LINC01539-201ENST00000587904 CRNKL1Q9BZJ0 848 aaKnown RBP11.12□□□□□ -0.63
LINC01539-201ENST00000587904 TSPY26PQ9H489 355 aa11.12□□□□□ -0.63
LINC01539-201ENST00000587904 GGA1Q9UJY5 639 aa11.12□□□□□ -0.63
LINC01539-201ENST00000587904 HPS5Q9UPZ3 1129 aa11.12□□□□□ -0.63
LINC01539-201ENST00000587904 SH3BP1Q9Y3L3 701 aa11.12□□□□□ -0.63
LINC01539-201ENST00000587904 TCHHQ07283 1943 aa11.11□□□□□ -0.63
LINC01539-201ENST00000587904 MYO1CO00159 1063 aa11.11□□□□□ -0.63
LINC01539-201ENST00000587904 CPLX1O14810 134 aa11.11□□□□□ -0.63
LINC01539-201ENST00000587904 FIBPO43427 364 aa11.11□□□□□ -0.63
LINC01539-201ENST00000587904 GPSM2P81274 684 aa11.11□□□□□ -0.63
LINC01539-201ENST00000587904 RESTQ13127 1097 aa11.11□□□□□ -0.63
LINC01539-201ENST00000587904 APOA5Q6Q788 366 aa11.11□□□□□ -0.63
LINC01539-201ENST00000587904 DZIP1Q86YF9 867 aaKnown RBP11.11□□□□□ -0.63
LINC01539-201ENST00000587904 TMTC2Q8N394 836 aa11.11□□□□□ -0.63
LINC01539-201ENST00000587904 DDX11Q96FC9 970 aa11.11□□□□□ -0.63
LINC01539-201ENST00000587904 CXorf56Q9H5V9 222 aa11.11□□□□□ -0.63
LINC01539-201ENST00000587904 NCOA5Q9HCD5 579 aaKnown RBP11.11□□□□□ -0.63
LINC01539-201ENST00000587904 ATP8A2Q9NTI2 1148 aa11.11□□□□□ -0.63
LINC01539-201ENST00000587904 QSER1Q2KHR3 1735 aa11.1□□□□□ -0.63
LINC01539-201ENST00000587904 IRF6O14896 467 aa11.1□□□□□ -0.63
LINC01539-201ENST00000587904 UFL1O94874 794 aa11.1□□□□□ -0.63
LINC01539-201ENST00000587904 ATP2B1P20020 1258 aa11.1□□□□□ -0.63
LINC01539-201ENST00000587904 METAP2P50579 478 aaKnown RBP eCLIP11.1□□□□□ -0.63
LINC01539-201ENST00000587904 CTDSPL2Q05D32 466 aa11.1□□□□□ -0.63
LINC01539-201ENST00000587904 FOXD4L6Q3SYB3 417 aaPredicted RBP11.1□□□□□ -0.63
LINC01539-201ENST00000587904 NOM1Q5C9Z4 860 aaKnown RBP11.1□□□□□ -0.63
LINC01539-201ENST00000587904 TMEM67Q5HYA8 995 aa11.1□□□□□ -0.63
LINC01539-201ENST00000587904 FOXD4L3Q6VB84 417 aaPredicted RBP11.1□□□□□ -0.63
LINC01539-201ENST00000587904 TXNRD3Q86VQ6 643 aa11.1□□□□□ -0.63
LINC01539-201ENST00000587904 IGDCC4Q8TDY8 1250 aa11.1□□□□□ -0.63
LINC01539-201ENST00000587904 ZNF384Q8TF68 577 aa11.1□□□□□ -0.63
LINC01539-201ENST00000587904 ESR2Q92731 530 aa11.1□□□□□ -0.63
LINC01539-201ENST00000587904 LY9Q9HBG7 655 aa11.1□□□□□ -0.63
LINC01539-201ENST00000587904 GDPD2Q9HCC8 539 aa11.1□□□□□ -0.63
LINC01539-201ENST00000587904 GPHNQ9NQX3 736 aaPredicted RBP11.1□□□□□ -0.63
LINC01539-201ENST00000587904 MYH15Q9Y2K3 1946 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms