RNA–Protein interactions for RNA: ENST00000587776.1

HDAC5-206, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 917 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-206ENST00000587776 TBC1D12O60347 775 aa18.67■□□□□ 0.58
HDAC5-206ENST00000587776 G3BP1Q13283 466 aaKnown RBP eCLIP18.67■□□□□ 0.58
HDAC5-206ENST00000587776 TREML2Q5T2D2 321 aa18.67■□□□□ 0.58
HDAC5-206ENST00000587776 TBC1D9Q6ZT07 1266 aa18.67■□□□□ 0.58
HDAC5-206ENST00000587776 TEX11Q8IYF3 940 aa18.67■□□□□ 0.58
HDAC5-206ENST00000587776 PROCA1Q8NCQ7 364 aaPredicted RBP18.67■□□□□ 0.58
HDAC5-206ENST00000587776 NSUN4Q96CB9 384 aaKnown RBP18.67■□□□□ 0.58
HDAC5-206ENST00000587776 LRP2BPQ9P2M1 347 aa18.67■□□□□ 0.58
HDAC5-206ENST00000587776 NR2E3Q9Y5X4 410 aa18.67■□□□□ 0.58
HDAC5-206ENST00000587776 SIPA1L1O43166 1804 aa18.66■□□□□ 0.58
HDAC5-206ENST00000587776 IPO8O15397 1037 aaKnown RBP18.66■□□□□ 0.58
HDAC5-206ENST00000587776 NPM3O75607 178 aaKnown RBP18.66■□□□□ 0.58
HDAC5-206ENST00000587776 SGPL1O95470 568 aa18.66■□□□□ 0.58
HDAC5-206ENST00000587776 MAP4K4O95819 1239 aaPredicted RBP18.66■□□□□ 0.58
HDAC5-206ENST00000587776 TFRCP02786 760 aaKnown RBP18.66■□□□□ 0.58
HDAC5-206ENST00000587776 GNAI2P04899 355 aa18.66■□□□□ 0.58
HDAC5-206ENST00000587776 PXYLP1Q8TE99 480 aa18.66■□□□□ 0.58
HDAC5-206ENST00000587776 ZNF384Q8TF68 577 aa18.66■□□□□ 0.58
HDAC5-206ENST00000587776 FRAT1Q92837 279 aaPredicted RBP18.66■□□□□ 0.58
HDAC5-206ENST00000587776 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.66■□□□□ 0.58
HDAC5-206ENST00000587776 ALPK3Q96L96 1907 aa18.65■□□□□ 0.58
HDAC5-206ENST00000587776 ARID4AP29374 1257 aaPredicted RBP18.65■□□□□ 0.58
HDAC5-206ENST00000587776 HMGCS2P54868 508 aa18.65■□□□□ 0.58
HDAC5-206ENST00000587776 SPP2Q13103 211 aa18.65■□□□□ 0.58
HDAC5-206ENST00000587776 PABPC4Q13310 644 aaKnown RBP eCLIP18.65■□□□□ 0.58
HDAC5-206ENST00000587776 IRF5Q13568 498 aa18.65■□□□□ 0.58
HDAC5-206ENST00000587776 FAM110CQ1W6H9 321 aa18.65■□□□□ 0.58
HDAC5-206ENST00000587776 UBE2Q1Q7Z7E8 422 aa18.65■□□□□ 0.58
HDAC5-206ENST00000587776 ZNF280CQ8ND82 737 aa18.65■□□□□ 0.58
HDAC5-206ENST00000587776 TBC1D2Q9BYX2 928 aa18.65■□□□□ 0.58
HDAC5-206ENST00000587776 RBM27Q9P2N5 1060 aaKnown RBP18.65■□□□□ 0.58
HDAC5-206ENST00000587776 UQCRFS1P1P0C7P4 283 aa18.64■□□□□ 0.57
HDAC5-206ENST00000587776 MCAMP43121 646 aa18.64■□□□□ 0.57
HDAC5-206ENST00000587776 DEFB118Q96PH6 123 aa18.64■□□□□ 0.57
HDAC5-206ENST00000587776 AS3MTQ9HBK9 375 aa18.64■□□□□ 0.57
HDAC5-206ENST00000587776 USP17L5A8MUK1 530 aa18.63■□□□□ 0.57
HDAC5-206ENST00000587776 TRIM27P14373 513 aa18.63■□□□□ 0.57
HDAC5-206ENST00000587776 CAP2P40123 477 aa18.63■□□□□ 0.57
HDAC5-206ENST00000587776 GCLCP48506 637 aaPredicted RBP18.63■□□□□ 0.57
HDAC5-206ENST00000587776 TTC39AQ5SRH9 613 aa18.63■□□□□ 0.57
HDAC5-206ENST00000587776 CLUAP1Q96AJ1 413 aa18.63■□□□□ 0.57
HDAC5-206ENST00000587776 HERC5Q9UII4 1024 aaKnown RBP18.63■□□□□ 0.57
HDAC5-206ENST00000587776 MYH1P12882 1939 aa18.62■□□□□ 0.57
HDAC5-206ENST00000587776 PNMA6EA0A0J9YXQ4 647 aa18.62■□□□□ 0.57
HDAC5-206ENST00000587776 EVI5O60447 810 aa18.62■□□□□ 0.57
HDAC5-206ENST00000587776 OS9Q13438 667 aaPredicted RBP18.62■□□□□ 0.57
HDAC5-206ENST00000587776 NAA16Q6N069 864 aaPredicted RBP18.62■□□□□ 0.57
HDAC5-206ENST00000587776 ATF7IPQ6VMQ6 1270 aa18.62■□□□□ 0.57
HDAC5-206ENST00000587776 SH3RF3Q8TEJ3 882 aaPredicted RBP18.62■□□□□ 0.57
HDAC5-206ENST00000587776 TRIM34Q9BYJ4 488 aa18.62■□□□□ 0.57
HDAC5-206ENST00000587776 PLXNB2O15031 1838 aa18.61■□□□□ 0.57
HDAC5-206ENST00000587776 BAG3O95817 575 aa18.61■□□□□ 0.57
HDAC5-206ENST00000587776 PLCG2P16885 1265 aa18.61■□□□□ 0.57
HDAC5-206ENST00000587776 CAPN2P17655 700 aa18.61■□□□□ 0.57
HDAC5-206ENST00000587776 SNRKQ9NRH2 765 aa18.61■□□□□ 0.57
HDAC5-206ENST00000587776 AATFQ9NY61 560 aaKnown RBP eCLIP18.61■□□□□ 0.57
HDAC5-206ENST00000587776 TNNQ9UQP3 1299 aa18.61■□□□□ 0.57
HDAC5-206ENST00000587776 ZBTB7BO15156 539 aaPredicted RBP18.6■□□□□ 0.57
HDAC5-206ENST00000587776 IRX3P78415 501 aaPredicted RBP18.6■□□□□ 0.57
HDAC5-206ENST00000587776 CCDC158Q5M9N0 1113 aa18.6■□□□□ 0.57
HDAC5-206ENST00000587776 CRACR2BQ8N4Y2 399 aaPredicted RBP18.6■□□□□ 0.57
HDAC5-206ENST00000587776 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.6■□□□□ 0.57
HDAC5-206ENST00000587776 ASCC2Q9H1I8 757 aaPredicted RBP18.6■□□□□ 0.57
HDAC5-206ENST00000587776 DHX36Q9H2U1 1008 aaKnown RBP18.6■□□□□ 0.57
HDAC5-206ENST00000587776 PAK6Q9NQU5 681 aaPredicted RBP18.6■□□□□ 0.57
HDAC5-206ENST00000587776 TMOD4Q9NZQ9 345 aa18.6■□□□□ 0.57
HDAC5-206ENST00000587776 PI4KBQ9UBF8 816 aa18.6■□□□□ 0.57
HDAC5-206ENST00000587776 DDX60LQ5H9U9 1706 aaKnown RBP18.6■□□□□ 0.57
HDAC5-206ENST00000587776 BCAR3O75815 825 aa18.59■□□□□ 0.57
HDAC5-206ENST00000587776 HMGCRP04035 888 aa18.59■□□□□ 0.57
HDAC5-206ENST00000587776 MTMR2Q13614 643 aa18.59■□□□□ 0.57
HDAC5-206ENST00000587776 ASNSP08243 561 aa18.58■□□□□ 0.56
HDAC5-206ENST00000587776 RRP1BQ14684 758 aaKnown RBP18.58■□□□□ 0.56
HDAC5-206ENST00000587776 MAPKAPK5Q8IW41 473 aa18.58■□□□□ 0.56
HDAC5-206ENST00000587776 TGFBRAP1Q8WUH2 860 aa18.58■□□□□ 0.56
HDAC5-206ENST00000587776 FLT1P17948 1338 aa18.57■□□□□ 0.56
HDAC5-206ENST00000587776 CCER2I3L3R5 266 aa18.57■□□□□ 0.56
HDAC5-206ENST00000587776 TNNI3KQ59H18 835 aa18.57■□□□□ 0.56
HDAC5-206ENST00000587776 SH3D19Q5HYK7 790 aa18.57■□□□□ 0.56
HDAC5-206ENST00000587776 NECAB2Q7Z6G3 386 aa18.57■□□□□ 0.56
HDAC5-206ENST00000587776 PAWRQ96IZ0 340 aaKnown RBP18.57■□□□□ 0.56
HDAC5-206ENST00000587776 DBNDD2Q9BQY9 259 aa18.57■□□□□ 0.56
HDAC5-206ENST00000587776 FPGT-TNNI3KV9GXZ4 949 aa18.57■□□□□ 0.56
HDAC5-206ENST00000587776 GDF11O95390 407 aa18.56■□□□□ 0.56
HDAC5-206ENST00000587776 TMEM57Q8N5G2 664 aa18.56■□□□□ 0.56
HDAC5-206ENST00000587776 WDR18Q9BV38 432 aa18.56■□□□□ 0.56
HDAC5-206ENST00000587776 CRISPLD2Q9H0B8 497 aa18.56■□□□□ 0.56
HDAC5-206ENST00000587776 HMX1Q9NP08 348 aaPredicted RBP18.56■□□□□ 0.56
HDAC5-206ENST00000587776 GPR108Q9NPR9 543 aa18.56■□□□□ 0.56
HDAC5-206ENST00000587776 RPTORQ8N122 1335 aa18.55■□□□□ 0.56
HDAC5-206ENST00000587776 HLA-DOAP06340 250 aa18.55■□□□□ 0.56
HDAC5-206ENST00000587776 BACE1P56817 501 aa18.55■□□□□ 0.56
HDAC5-206ENST00000587776 ZKSCAN2Q63HK3 967 aa18.55■□□□□ 0.56
HDAC5-206ENST00000587776 CCAR1Q8IX12 1150 aaKnown RBP18.55■□□□□ 0.56
HDAC5-206ENST00000587776 DIS3LQ8TF46 1054 aaKnown RBP18.55■□□□□ 0.56
HDAC5-206ENST00000587776 SAP30BPQ9UHR5 308 aaKnown RBP18.55■□□□□ 0.56
HDAC5-206ENST00000587776 PALD1Q9ULE6 856 aa18.55■□□□□ 0.56
HDAC5-206ENST00000587776 USP17L10C9JJH3 530 aa18.54■□□□□ 0.56
HDAC5-206ENST00000587776 SURF6O75683 361 aaKnown RBP18.54■□□□□ 0.56
HDAC5-206ENST00000587776 CYP2E1P05181 493 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms