RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-205ENST00000587580 ADD2P35612 726 aa28.44■■■□□ 2.14
CHAF1A-205ENST00000587580 HERC5Q9UII4 1024 aaKnown RBP28.44■■■□□ 2.14
CHAF1A-205ENST00000587580 PALD1Q9ULE6 856 aa28.44■■■□□ 2.14
CHAF1A-205ENST00000587580 NAV1Q8NEY1 1877 aa28.43■■■□□ 2.14
CHAF1A-205ENST00000587580 CETPP11597 493 aa28.43■■■□□ 2.14
CHAF1A-205ENST00000587580 IFFO2Q5TF58 517 aa28.43■■■□□ 2.14
CHAF1A-205ENST00000587580 ANKRD45Q5TZF3 282 aa28.43■■■□□ 2.14
CHAF1A-205ENST00000587580 R3HDMLQ9H3Y0 253 aa28.43■■■□□ 2.14
CHAF1A-205ENST00000587580 ATAD5Q96QE3 1844 aa28.43■■■□□ 2.14
CHAF1A-205ENST00000587580 GPR25O00155 361 aa28.42■■■□□ 2.14
CHAF1A-205ENST00000587580 HLA-DOAP06340 250 aa28.42■■■□□ 2.14
CHAF1A-205ENST00000587580 SLC4A8Q2Y0W8 1093 aa28.42■■■□□ 2.14
CHAF1A-205ENST00000587580 OTUD7AQ8TE49 926 aaPredicted RBP28.42■■■□□ 2.14
CHAF1A-205ENST00000587580 TTC41PQ6P2S7 1318 aa28.42■■■□□ 2.14
CHAF1A-205ENST00000587580 DDX60LQ5H9U9 1706 aaKnown RBP28.41■■■□□ 2.14
CHAF1A-205ENST00000587580 PTPRAP18433 802 aa28.41■■■□□ 2.14
CHAF1A-205ENST00000587580 SLFNL1Q499Z3 407 aa28.41■■■□□ 2.14
CHAF1A-205ENST00000587580 ZNF296Q8WUU4 475 aaPredicted RBP28.41■■■□□ 2.14
CHAF1A-205ENST00000587580 TRIM34Q9BYJ4 488 aa28.41■■■□□ 2.14
CHAF1A-205ENST00000587580 CRNKL1Q9BZJ0 848 aaKnown RBP28.41■■■□□ 2.14
CHAF1A-205ENST00000587580 KCNH4Q9UQ05 1017 aa28.41■■■□□ 2.14
CHAF1A-205ENST00000587580 NOM1Q5C9Z4 860 aaKnown RBP28.4■■■□□ 2.14
CHAF1A-205ENST00000587580 FAM43AQ8N2R8 423 aa28.4■■■□□ 2.14
CHAF1A-205ENST00000587580 LCORLQ8N3X6 602 aa28.4■■■□□ 2.14
CHAF1A-205ENST00000587580 CRACR2BQ8N4Y2 399 aaPredicted RBP28.4■■■□□ 2.14
CHAF1A-205ENST00000587580 ZHX2Q9Y6X8 837 aa28.4■■■□□ 2.14
CHAF1A-205ENST00000587580 PHIPQ8WWQ0 1821 aa28.39■■■□□ 2.14
CHAF1A-205ENST00000587580 ERC2O15083 957 aa28.39■■■□□ 2.14
CHAF1A-205ENST00000587580 CHGBP05060 677 aa28.39■■■□□ 2.14
CHAF1A-205ENST00000587580 CRHR2Q13324 411 aa28.39■■■□□ 2.14
CHAF1A-205ENST00000587580 ZSCAN25Q6NSZ9 544 aa28.39■■■□□ 2.14
CHAF1A-205ENST00000587580 RWDD1Q9H446 243 aaPredicted RBP28.39■■■□□ 2.14
CHAF1A-205ENST00000587580 DNAJC18Q9H819 358 aa28.39■■■□□ 2.14
CHAF1A-205ENST00000587580 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.39■■■□□ 2.14
CHAF1A-205ENST00000587580 MX1P20591 662 aa28.38■■■□□ 2.13
CHAF1A-205ENST00000587580 UBE3CQ15386 1083 aa28.38■■■□□ 2.13
CHAF1A-205ENST00000587580 TAF1CQ15572 869 aaPredicted RBP28.38■■■□□ 2.13
CHAF1A-205ENST00000587580 FOXP4Q8IVH2 680 aaPredicted RBP28.38■■■□□ 2.13
CHAF1A-205ENST00000587580 ARMT1Q9H993 441 aa28.38■■■□□ 2.13
CHAF1A-205ENST00000587580 BTBD19C9JJ37 291 aa28.37■■■□□ 2.13
CHAF1A-205ENST00000587580 MBD4O95243 580 aa28.37■■■□□ 2.13
CHAF1A-205ENST00000587580 CAP2P40123 477 aa28.37■■■□□ 2.13
CHAF1A-205ENST00000587580 DGKZQ13574 1117 aa28.37■■■□□ 2.13
CHAF1A-205ENST00000587580 RRP1BQ14684 758 aaKnown RBP28.37■■■□□ 2.13
CHAF1A-205ENST00000587580 CCDC84Q86UT8 332 aaPredicted RBP28.37■■■□□ 2.13
CHAF1A-205ENST00000587580 METTL16Q86W50 562 aaKnown RBP28.37■■■□□ 2.13
CHAF1A-205ENST00000587580 KBTBD3Q8NAB2 608 aa28.37■■■□□ 2.13
CHAF1A-205ENST00000587580 PI4K2BQ8TCG2 481 aa28.37■■■□□ 2.13
CHAF1A-205ENST00000587580 CXCL11O14625 94 aa28.36■■■□□ 2.13
CHAF1A-205ENST00000587580 FKTNO75072 461 aa28.36■■■□□ 2.13
CHAF1A-205ENST00000587580 GLRX3O76003 335 aaKnown RBP28.36■■■□□ 2.13
CHAF1A-205ENST00000587580 SDR42E1Q8WUS8 393 aa28.36■■■□□ 2.13
CHAF1A-205ENST00000587580 MCOLN1Q9GZU1 580 aa28.36■■■□□ 2.13
CHAF1A-205ENST00000587580 SALL3Q9BXA9 1300 aa28.36■■■□□ 2.13
CHAF1A-205ENST00000587580 IRX6P78412 446 aaPredicted RBP28.35■■■□□ 2.13
CHAF1A-205ENST00000587580 ZFYVE28Q9HCC9 887 aa28.35■■■□□ 2.13
CHAF1A-205ENST00000587580 ZCCHC17Q9NP64 241 aaKnown RBP28.35■■■□□ 2.13
CHAF1A-205ENST00000587580 AFG3L2Q9Y4W6 797 aa28.35■■■□□ 2.13
CHAF1A-205ENST00000587580 PTPRFP10586 1907 aa28.35■■■□□ 2.13
CHAF1A-205ENST00000587580 TTC6Q86TZ1 520 aa28.34■■■□□ 2.13
CHAF1A-205ENST00000587580 IGHDP01880 384 aa28.33■■■□□ 2.13
CHAF1A-205ENST00000587580 POLR3DP05423 398 aaPredicted RBP28.33■■■□□ 2.13
CHAF1A-205ENST00000587580 CTU1Q7Z7A3 348 aaKnown RBP28.33■■■□□ 2.13
CHAF1A-205ENST00000587580 ANKRD23Q86SG2 305 aa28.33■■■□□ 2.13
CHAF1A-205ENST00000587580 SMC5Q8IY18 1101 aa28.33■■■□□ 2.13
CHAF1A-205ENST00000587580 EHD4Q9H223 541 aa28.33■■■□□ 2.13
CHAF1A-205ENST00000587580 DCP1AQ9NPI6 582 aaPredicted RBP28.33■■■□□ 2.13
CHAF1A-205ENST00000587580 MCM9Q9NXL9 1143 aa28.33■■■□□ 2.13
CHAF1A-205ENST00000587580 A0A0G2JLL6 359 aaPredicted RBP28.32■■■□□ 2.12
CHAF1A-205ENST00000587580 TRIM75PA6NK02 468 aa28.32■■■□□ 2.12
CHAF1A-205ENST00000587580 CAPN15O75808 1086 aa28.32■■■□□ 2.12
CHAF1A-205ENST00000587580 MOGSQ13724 837 aa28.32■■■□□ 2.12
CHAF1A-205ENST00000587580 PRRT2Q7Z6L0 340 aaPredicted RBP28.32■■■□□ 2.12
CHAF1A-205ENST00000587580 PUS7LQ9H0K6 701 aaKnown RBP28.32■■■□□ 2.12
CHAF1A-205ENST00000587580 SERPINB13Q9UIV8 391 aa28.32■■■□□ 2.12
CHAF1A-205ENST00000587580 PRKAB2O43741 272 aa28.31■■■□□ 2.12
CHAF1A-205ENST00000587580 GDF11O95390 407 aa28.31■■■□□ 2.12
CHAF1A-205ENST00000587580 B4GALNT3Q6L9W6 998 aa28.31■■■□□ 2.12
CHAF1A-205ENST00000587580 ABHD8Q96I13 439 aa28.31■■■□□ 2.12
CHAF1A-205ENST00000587580 LNPKQ9C0E8 428 aa28.31■■■□□ 2.12
CHAF1A-205ENST00000587580 PLCD1P51178 756 aa28.3■■■□□ 2.12
CHAF1A-205ENST00000587580 GADL1Q6ZQY3 521 aa28.3■■■□□ 2.12
CHAF1A-205ENST00000587580 TBC1D2Q9BYX2 928 aa28.3■■■□□ 2.12
CHAF1A-205ENST00000587580 BAZ2AQ9UIF9 1905 aaKnown RBP28.3■■■□□ 2.12
CHAF1A-205ENST00000587580 USP17L5A8MUK1 530 aa28.29■■■□□ 2.12
CHAF1A-205ENST00000587580 PDHXO00330 501 aa28.29■■■□□ 2.12
CHAF1A-205ENST00000587580 RNF113AO15541 343 aaKnown RBP28.29■■■□□ 2.12
CHAF1A-205ENST00000587580 ASNSP08243 561 aa28.29■■■□□ 2.12
CHAF1A-205ENST00000587580 FASTKD5Q7L8L6 764 aaKnown RBP28.29■■■□□ 2.12
CHAF1A-205ENST00000587580 APPBP2Q92624 585 aa28.29■■■□□ 2.12
CHAF1A-205ENST00000587580 ATP8A2Q9NTI2 1148 aa28.29■■■□□ 2.12
CHAF1A-205ENST00000587580 ZFYP08048 801 aaPredicted RBP28.28■■■□□ 2.12
CHAF1A-205ENST00000587580 PDE1AP54750 535 aa28.28■■■□□ 2.12
CHAF1A-205ENST00000587580 JAG1P78504 1218 aa28.28■■■□□ 2.12
CHAF1A-205ENST00000587580 SHROOM1Q2M3G4 852 aaPredicted RBP28.28■■■□□ 2.12
CHAF1A-205ENST00000587580 LRRFIP1Q32MZ4 808 aaKnown RBP28.28■■■□□ 2.12
CHAF1A-205ENST00000587580 GPAT2Q6NUI2 795 aa28.28■■■□□ 2.12
CHAF1A-205ENST00000587580 ZNF280CQ8ND82 737 aa28.28■■■□□ 2.12
CHAF1A-205ENST00000587580 FSD1Q9BTV5 496 aa28.28■■■□□ 2.12
CHAF1A-205ENST00000587580 AS3MTQ9HBK9 375 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms