RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 NFIAQ12857 509 aa12.24□□□□□ -0.45
CLPTM1-207ENST00000587537 SART3Q15020 963 aaKnown RBP12.24□□□□□ -0.45
CLPTM1-207ENST00000587537 SUPT20HL1Q3ZLR7 823 aa12.24□□□□□ -0.45
CLPTM1-207ENST00000587537 DCAF15Q66K64 600 aa12.24□□□□□ -0.45
CLPTM1-207ENST00000587537 C16orf86Q6ZW13 317 aa12.24□□□□□ -0.45
CLPTM1-207ENST00000587537 SULF1Q8IWU6 871 aa12.24□□□□□ -0.45
CLPTM1-207ENST00000587537 ZSCAN29Q8IWY8 852 aaPredicted RBP12.24□□□□□ -0.45
CLPTM1-207ENST00000587537 CRACR2BQ8N4Y2 399 aaPredicted RBP12.24□□□□□ -0.45
CLPTM1-207ENST00000587537 TRPM4Q8TD43 1214 aa12.24□□□□□ -0.45
CLPTM1-207ENST00000587537 ESR2Q92731 530 aa12.24□□□□□ -0.45
CLPTM1-207ENST00000587537 CCDC17Q96LX7 622 aa12.24□□□□□ -0.45
CLPTM1-207ENST00000587537 NEK1Q96PY6 1258 aa12.24□□□□□ -0.45
CLPTM1-207ENST00000587537 RNF39Q9H2S5 420 aa12.24□□□□□ -0.45
CLPTM1-207ENST00000587537 DDX4Q9NQI0 724 aaKnown RBP12.24□□□□□ -0.45
CLPTM1-207ENST00000587537 CYP46A1Q9Y6A2 500 aa12.24□□□□□ -0.45
CLPTM1-207ENST00000587537 CNTNAP1P78357 1384 aa12.23□□□□□ -0.45
CLPTM1-207ENST00000587537 TCP10L2B9ZVM9 353 aa12.23□□□□□ -0.45
CLPTM1-207ENST00000587537 MCM5P33992 734 aa12.23□□□□□ -0.45
CLPTM1-207ENST00000587537 MAP3K10Q02779 954 aa12.23□□□□□ -0.45
CLPTM1-207ENST00000587537 ANKRD1Q15327 319 aa12.23□□□□□ -0.45
CLPTM1-207ENST00000587537 ANGEL2Q5VTE6 544 aaKnown RBP12.23□□□□□ -0.45
CLPTM1-207ENST00000587537 BLOC1S2Q6QNY1 142 aa12.23□□□□□ -0.45
CLPTM1-207ENST00000587537 FBXL16Q8N461 479 aa12.23□□□□□ -0.45
CLPTM1-207ENST00000587537 CSRNP1Q96S65 589 aa12.23□□□□□ -0.45
CLPTM1-207ENST00000587537 DEFB129Q9H1M3 183 aa12.23□□□□□ -0.45
CLPTM1-207ENST00000587537 ALDH8A1Q9H2A2 487 aaPredicted RBP12.23□□□□□ -0.45
CLPTM1-207ENST00000587537 MKNK2Q9HBH9 465 aa12.23□□□□□ -0.45
CLPTM1-207ENST00000587537 ZSWIM6Q9HCJ5 1215 aa12.23□□□□□ -0.45
CLPTM1-207ENST00000587537 GGA3Q9NZ52 723 aa12.23□□□□□ -0.45
CLPTM1-207ENST00000587537 SHTN1A0MZ66 631 aa12.22□□□□□ -0.45
CLPTM1-207ENST00000587537 NF2P35240 595 aa12.22□□□□□ -0.45
CLPTM1-207ENST00000587537 HIRAP54198 1017 aaPredicted RBP12.22□□□□□ -0.45
CLPTM1-207ENST00000587537 GABPAQ06546 454 aa12.22□□□□□ -0.45
CLPTM1-207ENST00000587537 TCP10Q12799 353 aa12.22□□□□□ -0.45
CLPTM1-207ENST00000587537 RASA3Q14644 834 aa12.22□□□□□ -0.45
CLPTM1-207ENST00000587537 RUFY3Q7L099 469 aa12.22□□□□□ -0.45
CLPTM1-207ENST00000587537 CDC37L1Q7L3B6 337 aa12.22□□□□□ -0.45
CLPTM1-207ENST00000587537 DHX32Q7L7V1 743 aaKnown RBP12.22□□□□□ -0.45
CLPTM1-207ENST00000587537 LDHDQ86WU2 507 aa12.22□□□□□ -0.45
CLPTM1-207ENST00000587537 IQCA1Q86XH1 822 aa12.22□□□□□ -0.45
CLPTM1-207ENST00000587537 ZNF444Q8N0Y2 327 aaPredicted RBP12.22□□□□□ -0.45
CLPTM1-207ENST00000587537 TMTC2Q8N394 836 aa12.22□□□□□ -0.45
CLPTM1-207ENST00000587537 CHMP4CQ96CF2 233 aa12.22□□□□□ -0.45
CLPTM1-207ENST00000587537 TMEM87BQ96K49 555 aa12.22□□□□□ -0.45
CLPTM1-207ENST00000587537 JAKMIP1Q96N16 626 aaKnown RBP12.22□□□□□ -0.45
CLPTM1-207ENST00000587537 PALD1Q9ULE6 856 aa12.22□□□□□ -0.45
CLPTM1-207ENST00000587537 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.22□□□□□ -0.45
CLPTM1-207ENST00000587537 PCDHAC2Q9Y5I4 1007 aa12.22□□□□□ -0.45
CLPTM1-207ENST00000587537 PLIN4Q96Q06 1357 aa12.21□□□□□ -0.45
CLPTM1-207ENST00000587537 UNCXA6NJT0 531 aa12.21□□□□□ -0.45
CLPTM1-207ENST00000587537 EGFRP00533 1210 aa12.21□□□□□ -0.45
CLPTM1-207ENST00000587537 CASTP20810 708 aaKnown RBP12.21□□□□□ -0.45
CLPTM1-207ENST00000587537 CACNB3P54284 484 aa12.21□□□□□ -0.45
CLPTM1-207ENST00000587537 HAND2P61296 217 aa12.21□□□□□ -0.45
CLPTM1-207ENST00000587537 RASEFQ8IZ41 740 aa12.21□□□□□ -0.45
CLPTM1-207ENST00000587537 SAP30BPQ9UHR5 308 aaKnown RBP12.21□□□□□ -0.45
CLPTM1-207ENST00000587537 ERICH2A1L162 156 aa12.2□□□□□ -0.46
CLPTM1-207ENST00000587537 DDTLA6NHG4 134 aaPredicted RBP12.2□□□□□ -0.46
CLPTM1-207ENST00000587537 POTECB2RU33 542 aa12.2□□□□□ -0.46
CLPTM1-207ENST00000587537 KCNA4P22459 653 aa12.2□□□□□ -0.46
CLPTM1-207ENST00000587537 RPS6KB1P23443 525 aa12.2□□□□□ -0.46
CLPTM1-207ENST00000587537 ANP32AP39687 249 aaKnown RBP12.2□□□□□ -0.46
CLPTM1-207ENST00000587537 CDK8P49336 464 aa12.2□□□□□ -0.46
CLPTM1-207ENST00000587537 PLCD1P51178 756 aa12.2□□□□□ -0.46
CLPTM1-207ENST00000587537 CTDSPL2Q05D32 466 aa12.2□□□□□ -0.46
CLPTM1-207ENST00000587537 TATDN1Q6P1N9 297 aa12.2□□□□□ -0.46
CLPTM1-207ENST00000587537 KRT26Q7Z3Y9 468 aa12.2□□□□□ -0.46
CLPTM1-207ENST00000587537 TBC1D10CQ8IV04 446 aa12.2□□□□□ -0.46
CLPTM1-207ENST00000587537 TOMM22Q9NS69 142 aa12.2□□□□□ -0.46
CLPTM1-207ENST00000587537 TCP11L1Q9NUJ3 509 aa12.2□□□□□ -0.46
CLPTM1-207ENST00000587537 SYNPO2Q9UMS6 1093 aa12.2□□□□□ -0.46
CLPTM1-207ENST00000587537 UTRNP46939 3433 aa12.2□□□□□ -0.46
CLPTM1-207ENST00000587537 SIPA1L1O43166 1804 aa12.19□□□□□ -0.46
CLPTM1-207ENST00000587537 TSPY2A6NKD2 308 aa12.19□□□□□ -0.46
CLPTM1-207ENST00000587537 TSPY3P0CV98 308 aa12.19□□□□□ -0.46
CLPTM1-207ENST00000587537 TSPY8P0CW00 308 aa12.19□□□□□ -0.46
CLPTM1-207ENST00000587537 NEK4P51957 841 aa12.19□□□□□ -0.46
CLPTM1-207ENST00000587537 EAPPQ56P03 285 aaPredicted RBP12.19□□□□□ -0.46
CLPTM1-207ENST00000587537 MB21D2Q8IYB1 491 aaPredicted RBP12.19□□□□□ -0.46
CLPTM1-207ENST00000587537 TEPSINQ96N21 525 aa12.19□□□□□ -0.46
CLPTM1-207ENST00000587537 TTC14Q96N46 770 aa12.19□□□□□ -0.46
CLPTM1-207ENST00000587537 KIF2CQ99661 725 aa12.19□□□□□ -0.46
CLPTM1-207ENST00000587537 UBAC1Q9BSL1 405 aa12.19□□□□□ -0.46
CLPTM1-207ENST00000587537 TBC1D2Q9BYX2 928 aa12.19□□□□□ -0.46
CLPTM1-207ENST00000587537 TMEM39BQ9GZU3 492 aa12.19□□□□□ -0.46
CLPTM1-207ENST00000587537 NBPF3Q9H094 633 aa12.19□□□□□ -0.46
CLPTM1-207ENST00000587537 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.19□□□□□ -0.46
CLPTM1-207ENST00000587537 CABP5Q9NP86 173 aa12.19□□□□□ -0.46
CLPTM1-207ENST00000587537 POLR2AP24928 1970 aaKnown RBP12.19□□□□□ -0.46
CLPTM1-207ENST00000587537 NEDD4P46934 1319 aa12.18□□□□□ -0.46
CLPTM1-207ENST00000587537 PPP1R12BO60237 982 aaPredicted RBP12.18□□□□□ -0.46
CLPTM1-207ENST00000587537 RANBP6O60518 1105 aaKnown RBP12.18□□□□□ -0.46
CLPTM1-207ENST00000587537 CYP2D6P10635 497 aa12.18□□□□□ -0.46
CLPTM1-207ENST00000587537 LIFRP42702 1097 aa12.18□□□□□ -0.46
CLPTM1-207ENST00000587537 RCAN1P53805 252 aa12.18□□□□□ -0.46
CLPTM1-207ENST00000587537 FGD1P98174 961 aa12.18□□□□□ -0.46
CLPTM1-207ENST00000587537 EXOSC10Q01780 885 aaKnown RBP12.18□□□□□ -0.46
CLPTM1-207ENST00000587537 BECN1Q14457 450 aa12.18□□□□□ -0.46
CLPTM1-207ENST00000587537 CERKLQ49MI3 558 aaPredicted RBP12.18□□□□□ -0.46
CLPTM1-207ENST00000587537 SH3BP5LQ7L8J4 393 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms