RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 LRP2BPQ9P2M1 347 aa17.22■□□□□ 0.35
ATG4D-206ENST00000586863 MAP4K4O95819 1239 aaPredicted RBP17.21■□□□□ 0.35
ATG4D-206ENST00000586863 FCGRTP55899 365 aa17.21■□□□□ 0.35
ATG4D-206ENST00000586863 ATP8B2P98198 1209 aa17.21■□□□□ 0.35
ATG4D-206ENST00000586863 OS9Q13438 667 aaPredicted RBP17.21■□□□□ 0.35
ATG4D-206ENST00000586863 RRP1BQ14684 758 aaKnown RBP17.21■□□□□ 0.35
ATG4D-206ENST00000586863 TTC39AQ5SRH9 613 aa17.21■□□□□ 0.35
ATG4D-206ENST00000586863 FTSJ3Q8IY81 847 aaKnown RBP17.21■□□□□ 0.35
ATG4D-206ENST00000586863 SHISA4Q96DD7 197 aa17.21■□□□□ 0.35
ATG4D-206ENST00000586863 SLC45A1Q9Y2W3 748 aa17.21■□□□□ 0.35
ATG4D-206ENST00000586863 SURF6O75683 361 aaKnown RBP17.2■□□□□ 0.34
ATG4D-206ENST00000586863 GRK4P32298 578 aa17.2■□□□□ 0.34
ATG4D-206ENST00000586863 TREML2Q5T2D2 321 aa17.2■□□□□ 0.34
ATG4D-206ENST00000586863 NAA16Q6N069 864 aaPredicted RBP17.2■□□□□ 0.34
ATG4D-206ENST00000586863 ITPRIPQ8IWB1 547 aa17.2■□□□□ 0.34
ATG4D-206ENST00000586863 AATFQ9NY61 560 aaKnown RBP eCLIP17.2■□□□□ 0.34
ATG4D-206ENST00000586863 GABRQQ9UN88 632 aa17.2■□□□□ 0.34
ATG4D-206ENST00000586863 AGTPBP1Q9UPW5 1226 aa17.2■□□□□ 0.34
ATG4D-206ENST00000586863 CYP2E1P05181 493 aaPredicted RBP17.19■□□□□ 0.34
ATG4D-206ENST00000586863 CCDC158Q5M9N0 1113 aa17.19■□□□□ 0.34
ATG4D-206ENST00000586863 ADGRA1Q86SQ6 560 aa17.19■□□□□ 0.34
ATG4D-206ENST00000586863 MIER1Q8N108 512 aa17.19■□□□□ 0.34
ATG4D-206ENST00000586863 SMCR8Q8TEV9 937 aaPredicted RBP17.19■□□□□ 0.34
ATG4D-206ENST00000586863 GCC1Q96CN9 775 aa17.19■□□□□ 0.34
ATG4D-206ENST00000586863 TLR7Q9NYK1 1049 aaKnown RBP17.19■□□□□ 0.34
ATG4D-206ENST00000586863 SPP2Q13103 211 aa17.18■□□□□ 0.34
ATG4D-206ENST00000586863 DBNLQ9UJU6 430 aaKnown RBP17.18■□□□□ 0.34
ATG4D-206ENST00000586863 NOP58Q9Y2X3 529 aaKnown RBP17.18■□□□□ 0.34
ATG4D-206ENST00000586863 SZT2Q5T011 3432 aa17.18■□□□□ 0.34
ATG4D-206ENST00000586863 ZBTB7BO15156 539 aaPredicted RBP17.17■□□□□ 0.34
ATG4D-206ENST00000586863 CCL5P13501 91 aa17.17■□□□□ 0.34
ATG4D-206ENST00000586863 CAP2P40123 477 aa17.17■□□□□ 0.34
ATG4D-206ENST00000586863 HABP4Q5JVS0 413 aaKnown RBP17.17■□□□□ 0.34
ATG4D-206ENST00000586863 MAPKAPK5Q8IW41 473 aa17.17■□□□□ 0.34
ATG4D-206ENST00000586863 ZNF280CQ8ND82 737 aa17.17■□□□□ 0.34
ATG4D-206ENST00000586863 ZNF512BQ96KM6 892 aaPredicted RBP17.17■□□□□ 0.34
ATG4D-206ENST00000586863 NOL10Q9BSC4 688 aaKnown RBP17.17■□□□□ 0.34
ATG4D-206ENST00000586863 PIH1D3Q9NQM4 214 aaKnown RBP17.17■□□□□ 0.34
ATG4D-206ENST00000586863 HERC5Q9UII4 1024 aaKnown RBP17.17■□□□□ 0.34
ATG4D-206ENST00000586863 FLT1P17948 1338 aa17.17■□□□□ 0.34
ATG4D-206ENST00000586863 MYH1P12882 1939 aa17.16■□□□□ 0.34
ATG4D-206ENST00000586863 BAG3O95817 575 aa17.16■□□□□ 0.34
ATG4D-206ENST00000586863 ZAP70P43403 619 aa17.16■□□□□ 0.34
ATG4D-206ENST00000586863 FLT3LGP49771 235 aa17.16■□□□□ 0.34
ATG4D-206ENST00000586863 HMGCS2P54868 508 aa17.16■□□□□ 0.34
ATG4D-206ENST00000586863 PPP4CP60510 307 aa17.16■□□□□ 0.34
ATG4D-206ENST00000586863 ANKRD13CQ8N6S4 541 aa17.16■□□□□ 0.34
ATG4D-206ENST00000586863 PROCA1Q8NCQ7 364 aaPredicted RBP17.16■□□□□ 0.34
ATG4D-206ENST00000586863 SLAIN1Q8ND83 568 aa17.16■□□□□ 0.34
ATG4D-206ENST00000586863 TGFBRAP1Q8WUH2 860 aa17.16■□□□□ 0.34
ATG4D-206ENST00000586863 CCDC8Q9H0W5 538 aaPredicted RBP17.16■□□□□ 0.34
ATG4D-206ENST00000586863 DNAJC18Q9H819 358 aa17.16■□□□□ 0.34
ATG4D-206ENST00000586863 PI4KBQ9UBF8 816 aa17.16■□□□□ 0.34
ATG4D-206ENST00000586863 BIN2Q9UBW5 565 aaPredicted RBP17.16■□□□□ 0.34
ATG4D-206ENST00000586863 TNPO2O14787 897 aaKnown RBP17.15■□□□□ 0.34
ATG4D-206ENST00000586863 GJB1P08034 283 aa17.15■□□□□ 0.34
ATG4D-206ENST00000586863 PLCG2P16885 1265 aa17.15■□□□□ 0.34
ATG4D-206ENST00000586863 CEP85Q6P2H3 762 aa17.15■□□□□ 0.34
ATG4D-206ENST00000586863 EAF2Q96CJ1 260 aaPredicted RBP17.15■□□□□ 0.34
ATG4D-206ENST00000586863 RNF208Q9H0X6 261 aa17.15■□□□□ 0.34
ATG4D-206ENST00000586863 DHX36Q9H2U1 1008 aaKnown RBP17.15■□□□□ 0.34
ATG4D-206ENST00000586863 PNMA3Q9UL41 463 aa17.15■□□□□ 0.34
ATG4D-206ENST00000586863 USP17L5A8MUK1 530 aa17.14■□□□□ 0.33
ATG4D-206ENST00000586863 ADCY3O60266 1144 aa17.14■□□□□ 0.33
ATG4D-206ENST00000586863 ELNP15502 786 aa17.14■□□□□ 0.33
ATG4D-206ENST00000586863 GJA8P48165 433 aa17.14■□□□□ 0.33
ATG4D-206ENST00000586863 DYNLL1P63167 89 aaKnown RBP17.14■□□□□ 0.33
ATG4D-206ENST00000586863 UBXN2AP68543 259 aa17.14■□□□□ 0.33
ATG4D-206ENST00000586863 JAG1P78504 1218 aa17.14■□□□□ 0.33
ATG4D-206ENST00000586863 FAM110CQ1W6H9 321 aa17.14■□□□□ 0.33
ATG4D-206ENST00000586863 SHROOM1Q2M3G4 852 aaPredicted RBP17.14■□□□□ 0.33
ATG4D-206ENST00000586863 TBC1D2Q9BYX2 928 aa17.14■□□□□ 0.33
ATG4D-206ENST00000586863 UNC93B1Q9H1C4 597 aa17.14■□□□□ 0.33
ATG4D-206ENST00000586863 PCDH10Q9P2E7 1040 aa17.14■□□□□ 0.33
ATG4D-206ENST00000586863 SH3D19Q5HYK7 790 aa17.13■□□□□ 0.33
ATG4D-206ENST00000586863 UBE2Q1Q7Z7E8 422 aa17.13■□□□□ 0.33
ATG4D-206ENST00000586863 METTL16Q86W50 562 aaKnown RBP17.13■□□□□ 0.33
ATG4D-206ENST00000586863 NKX2-3Q8TAU0 364 aa17.13■□□□□ 0.33
ATG4D-206ENST00000586863 PANK1Q8TE04 598 aa17.13■□□□□ 0.33
ATG4D-206ENST00000586863 PALD1Q9ULE6 856 aa17.13■□□□□ 0.33
ATG4D-206ENST00000586863 NDUFB9Q9Y6M9 179 aa17.13■□□□□ 0.33
ATG4D-206ENST00000586863 H0YGN5 161 aa17.12■□□□□ 0.33
ATG4D-206ENST00000586863 INHAP05111 366 aa17.12■□□□□ 0.33
ATG4D-206ENST00000586863 CYP7A1P22680 504 aa17.12■□□□□ 0.33
ATG4D-206ENST00000586863 IRF5Q13568 498 aa17.12■□□□□ 0.33
ATG4D-206ENST00000586863 MTMR2Q13614 643 aa17.12■□□□□ 0.33
ATG4D-206ENST00000586863 U2AF1L4Q8WU68 220 aaKnown RBP17.12■□□□□ 0.33
ATG4D-206ENST00000586863 ASCC2Q9H1I8 757 aaPredicted RBP17.12■□□□□ 0.33
ATG4D-206ENST00000586863 AS3MTQ9HBK9 375 aa17.12■□□□□ 0.33
ATG4D-206ENST00000586863 SAP30BPQ9UHR5 308 aaKnown RBP17.12■□□□□ 0.33
ATG4D-206ENST00000586863 EXOC6BQ9Y2D4 811 aa17.12■□□□□ 0.33
ATG4D-206ENST00000586863 ZBED9Q6R2W3 1325 aa17.12■□□□□ 0.33
ATG4D-206ENST00000586863 PLXNB2O15031 1838 aa17.12■□□□□ 0.33
ATG4D-206ENST00000586863 LAMA3Q16787 3333 aa17.11■□□□□ 0.33
ATG4D-206ENST00000586863 IDH1O75874 414 aaKnown RBP17.11■□□□□ 0.33
ATG4D-206ENST00000586863 GDF11O95390 407 aa17.11■□□□□ 0.33
ATG4D-206ENST00000586863 ASNSP08243 561 aa17.11■□□□□ 0.33
ATG4D-206ENST00000586863 GCLCP48506 637 aaPredicted RBP17.11■□□□□ 0.33
ATG4D-206ENST00000586863 PABPC4Q13310 644 aaKnown RBP eCLIP17.11■□□□□ 0.33
ATG4D-206ENST00000586863 CRACR2BQ8N4Y2 399 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms