RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 MYOZ2Q9NPC6 264 aa24.03■■□□□ 1.44
ATG4D-204ENST00000586417 ATP8A2Q9NTI2 1148 aa24.03■■□□□ 1.44
ATG4D-204ENST00000586417 GPRC5DQ9NZD1 345 aa24.03■■□□□ 1.44
ATG4D-204ENST00000586417 LAMB1P07942 1786 aa24.02■■□□□ 1.44
ATG4D-204ENST00000586417 EPS15P42566 896 aa24.02■■□□□ 1.44
ATG4D-204ENST00000586417 RBM26Q5T8P6 1007 aaKnown RBP24.02■■□□□ 1.44
ATG4D-204ENST00000586417 CTR9Q6PD62 1173 aa24.02■■□□□ 1.44
ATG4D-204ENST00000586417 SMARCC2Q8TAQ2 1214 aa24.02■■□□□ 1.44
ATG4D-204ENST00000586417 KRT23Q9C075 422 aa24.02■■□□□ 1.44
ATG4D-204ENST00000586417 ZC3H4Q9UPT8 1303 aaKnown RBP24.02■■□□□ 1.44
ATG4D-204ENST00000586417 SPDYE2BA6NHP3 402 aa24.01■■□□□ 1.43
ATG4D-204ENST00000586417 MINDY4BA8MYZ0 360 aa24.01■■□□□ 1.43
ATG4D-204ENST00000586417 JAK2O60674 1132 aa24.01■■□□□ 1.43
ATG4D-204ENST00000586417 SPDYE6P0CI01 402 aa24.01■■□□□ 1.43
ATG4D-204ENST00000586417 DLGAP5Q15398 846 aa24.01■■□□□ 1.43
ATG4D-204ENST00000586417 DPY19L2Q6NUT2 758 aa24.01■■□□□ 1.43
ATG4D-204ENST00000586417 CDC42EP5Q6NZY7 148 aa24.01■■□□□ 1.43
ATG4D-204ENST00000586417 TMEM87BQ96K49 555 aa24.01■■□□□ 1.43
ATG4D-204ENST00000586417 LLPHQ9BRT6 129 aaKnown RBP24.01■■□□□ 1.43
ATG4D-204ENST00000586417 RNF41Q9H4P4 317 aaPredicted RBP24.01■■□□□ 1.43
ATG4D-204ENST00000586417 ZSWIM5Q9P217 1185 aa24.01■■□□□ 1.43
ATG4D-204ENST00000586417 ANGEL1Q9UNK9 670 aaKnown RBP24.01■■□□□ 1.43
ATG4D-204ENST00000586417 ECM29Q5VYK3 1845 aa24.01■■□□□ 1.43
ATG4D-204ENST00000586417 GLTPD2A6NH11 291 aa24.01■■□□□ 1.43
ATG4D-204ENST00000586417 KDM4AO75164 1064 aa24.01■■□□□ 1.43
ATG4D-204ENST00000586417 CTDNEP1O95476 244 aa24.01■■□□□ 1.43
ATG4D-204ENST00000586417 ZSCAN22P10073 491 aaPredicted RBP24.01■■□□□ 1.43
ATG4D-204ENST00000586417 TBC1D10BQ4KMP7 808 aaPredicted RBP24.01■■□□□ 1.43
ATG4D-204ENST00000586417 IGDCC4Q8TDY8 1250 aa24.01■■□□□ 1.43
ATG4D-204ENST00000586417 TDRD3Q9H7E2 651 aaKnown RBP24.01■■□□□ 1.43
ATG4D-204ENST00000586417 USP40Q9NVE5 1235 aa24.01■■□□□ 1.43
ATG4D-204ENST00000586417 HPS5Q9UPZ3 1129 aa24.01■■□□□ 1.43
ATG4D-204ENST00000586417 MTMR6Q9Y217 621 aa24.01■■□□□ 1.43
ATG4D-204ENST00000586417 CYP2D7A0A087X1C5 515 aa24■■□□□ 1.43
ATG4D-204ENST00000586417 KLF18A0A0U1RQI7 1052 aa24■■□□□ 1.43
ATG4D-204ENST00000586417 CACNB3P54284 484 aa24■■□□□ 1.43
ATG4D-204ENST00000586417 CCT2P78371 535 aaKnown RBP24■■□□□ 1.43
ATG4D-204ENST00000586417 NBPF9Q3BBW0 867 aa24■■□□□ 1.43
ATG4D-204ENST00000586417 NSUN7Q8NE18 718 aaKnown RBP24■■□□□ 1.43
ATG4D-204ENST00000586417 ZBED3Q96IU2 234 aaPredicted RBP24■■□□□ 1.43
ATG4D-204ENST00000586417 CHAMP1Q96JM3 812 aa24■■□□□ 1.43
ATG4D-204ENST00000586417 MKRN1Q9UHC7 482 aaKnown RBP24■■□□□ 1.43
ATG4D-204ENST00000586417 USP17L12C9JPN9 530 aa23.99■■□□□ 1.43
ATG4D-204ENST00000586417 USP17L21D6R901 530 aa23.99■■□□□ 1.43
ATG4D-204ENST00000586417 NCOA5Q9HCD5 579 aaKnown RBP23.99■■□□□ 1.43
ATG4D-204ENST00000586417 WNT10BO00744 389 aa23.98■■□□□ 1.43
ATG4D-204ENST00000586417 FGRP09769 529 aa23.98■■□□□ 1.43
ATG4D-204ENST00000586417 SBK1Q52WX2 424 aa23.98■■□□□ 1.43
ATG4D-204ENST00000586417 TEX11Q8IYF3 940 aa23.98■■□□□ 1.43
ATG4D-204ENST00000586417 MTMR14Q8NCE2 650 aa23.98■■□□□ 1.43
ATG4D-204ENST00000586417 TGFBRAP1Q8WUH2 860 aa23.98■■□□□ 1.43
ATG4D-204ENST00000586417 LY9Q9HBG7 655 aa23.98■■□□□ 1.43
ATG4D-204ENST00000586417 H7C1D1 291 aa23.98■■□□□ 1.43
ATG4D-204ENST00000586417 WDHD1O75717 1129 aaPredicted RBP23.98■■□□□ 1.43
ATG4D-204ENST00000586417 MCTP1Q6DN14 999 aa23.98■■□□□ 1.43
ATG4D-204ENST00000586417 SENP2Q9HC62 589 aa23.98■■□□□ 1.43
ATG4D-204ENST00000586417 NAP1L2Q9ULW6 460 aaPredicted RBP23.98■■□□□ 1.43
ATG4D-204ENST00000586417 FOCADQ5VW36 1801 aa23.97■■□□□ 1.43
ATG4D-204ENST00000586417 GOLGA8BA8MQT2 603 aa23.97■■□□□ 1.43
ATG4D-204ENST00000586417 PLCG2P16885 1265 aa23.97■■□□□ 1.43
ATG4D-204ENST00000586417 PDCP20941 246 aa23.97■■□□□ 1.43
ATG4D-204ENST00000586417 EVX2Q03828 476 aa23.97■■□□□ 1.43
ATG4D-204ENST00000586417 RRP12Q5JTH9 1297 aaKnown RBP23.97■■□□□ 1.43
ATG4D-204ENST00000586417 LARP1BQ659C4 914 aaKnown RBP23.97■■□□□ 1.43
ATG4D-204ENST00000586417 SGMS1Q86VZ5 419 aa23.97■■□□□ 1.43
ATG4D-204ENST00000586417 CERS3Q8IU89 383 aa23.97■■□□□ 1.43
ATG4D-204ENST00000586417 STK11IPQ8N1F8 1099 aa23.97■■□□□ 1.43
ATG4D-204ENST00000586417 TRPM4Q8TD43 1214 aa23.97■■□□□ 1.43
ATG4D-204ENST00000586417 ARPP21Q9UBL0 812 aaPredicted RBP23.97■■□□□ 1.43
ATG4D-204ENST00000586417 ASTN2O75129 1339 aaPredicted RBP23.96■■□□□ 1.43
ATG4D-204ENST00000586417 CLRN2A0PK11 232 aa23.96■■□□□ 1.43
ATG4D-204ENST00000586417 GOLGA6L22H0YM25 854 aa23.96■■□□□ 1.43
ATG4D-204ENST00000586417 TRAK2O60296 914 aa23.96■■□□□ 1.43
ATG4D-204ENST00000586417 F13A1P00488 732 aa23.96■■□□□ 1.43
ATG4D-204ENST00000586417 PDIA4P13667 645 aaKnown RBP23.96■■□□□ 1.43
ATG4D-204ENST00000586417 PTMSP20962 102 aa23.96■■□□□ 1.43
ATG4D-204ENST00000586417 LIFRP42702 1097 aa23.96■■□□□ 1.43
ATG4D-204ENST00000586417 NFIAQ12857 509 aa23.96■■□□□ 1.43
ATG4D-204ENST00000586417 MAPKAPK5Q8IW41 473 aa23.96■■□□□ 1.43
ATG4D-204ENST00000586417 L3MBTL3Q96JM7 780 aaPredicted RBP23.96■■□□□ 1.43
ATG4D-204ENST00000586417 MTA3Q9BTC8 594 aa23.96■■□□□ 1.43
ATG4D-204ENST00000586417 DDX4Q9NQI0 724 aaKnown RBP23.96■■□□□ 1.43
ATG4D-204ENST00000586417 PTPDC1A2A3K4 754 aa23.96■■□□□ 1.43
ATG4D-204ENST00000586417 PCP11498 1178 aaKnown RBP23.96■■□□□ 1.43
ATG4D-204ENST00000586417 USP5P45974 858 aa23.96■■□□□ 1.43
ATG4D-204ENST00000586417 MMP14P50281 582 aa23.96■■□□□ 1.43
ATG4D-204ENST00000586417 TMEM67Q5HYA8 995 aa23.96■■□□□ 1.43
ATG4D-204ENST00000586417 TOMM22Q9NS69 142 aa23.96■■□□□ 1.43
ATG4D-204ENST00000586417 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.96■■□□□ 1.43
ATG4D-204ENST00000586417 NAV1Q8NEY1 1877 aa23.95■■□□□ 1.43
ATG4D-204ENST00000586417 CYP2D6P10635 497 aa23.95■■□□□ 1.42
ATG4D-204ENST00000586417 HIRAP54198 1017 aaPredicted RBP23.95■■□□□ 1.42
ATG4D-204ENST00000586417 PICALMQ13492 652 aa23.95■■□□□ 1.42
ATG4D-204ENST00000586417 KIF4BQ2VIQ3 1234 aa23.95■■□□□ 1.42
ATG4D-204ENST00000586417 CHMP4CQ96CF2 233 aa23.95■■□□□ 1.42
ATG4D-204ENST00000586417 DDX60LQ5H9U9 1706 aaKnown RBP23.94■■□□□ 1.42
ATG4D-204ENST00000586417 POTECB2RU33 542 aa23.94■■□□□ 1.42
ATG4D-204ENST00000586417 IFIT3O14879 490 aaKnown RBP23.94■■□□□ 1.42
ATG4D-204ENST00000586417 LMOD1P29536 600 aaPredicted RBP23.94■■□□□ 1.42
ATG4D-204ENST00000586417 APOA5Q6Q788 366 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms