RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 KIF28PB7ZC32 967 aa14.3□□□□□ -0.12
SMARCA4-208ENST00000585799 TMC6Q7Z403 805 aa14.3□□□□□ -0.12
SMARCA4-208ENST00000585799 PARP3Q9Y6F1 533 aa14.3□□□□□ -0.12
SMARCA4-208ENST00000585799 RTL9Q8NET4 1388 aa14.3□□□□□ -0.12
SMARCA4-208ENST00000585799 GUCY1A2P33402 732 aa14.3□□□□□ -0.12
SMARCA4-208ENST00000585799 SF3B3Q15393 1217 aaKnown RBP14.3□□□□□ -0.12
SMARCA4-208ENST00000585799 PIK3AP1Q6ZUJ8 805 aa14.3□□□□□ -0.12
SMARCA4-208ENST00000585799 ADGRA1Q86SQ6 560 aa14.3□□□□□ -0.12
SMARCA4-208ENST00000585799 C16orf45Q96MC5 204 aaPredicted RBP14.3□□□□□ -0.12
SMARCA4-208ENST00000585799 UIMC1Q96RL1 719 aa14.3□□□□□ -0.12
SMARCA4-208ENST00000585799 BAZ2BQ9UIF8 2168 aaKnown RBP14.29□□□□□ -0.12
SMARCA4-208ENST00000585799 PFKFB1P16118 471 aa14.29□□□□□ -0.12
SMARCA4-208ENST00000585799 ALDH8A1Q9H2A2 487 aaPredicted RBP14.29□□□□□ -0.12
SMARCA4-208ENST00000585799 ZNF287Q9HBT7 754 aa14.29□□□□□ -0.12
SMARCA4-208ENST00000585799 VWA3AA6NCI4 1184 aa14.29□□□□□ -0.12
SMARCA4-208ENST00000585799 TXLNAP40222 546 aa14.29□□□□□ -0.12
SMARCA4-208ENST00000585799 TCP10Q12799 353 aa14.29□□□□□ -0.12
SMARCA4-208ENST00000585799 LINC00301Q8NCQ3 95 aa14.29□□□□□ -0.12
SMARCA4-208ENST00000585799 GOLPH3LQ9H4A5 285 aa14.29□□□□□ -0.12
SMARCA4-208ENST00000585799 POLR2DO15514 142 aaKnown RBP14.29□□□□□ -0.12
SMARCA4-208ENST00000585799 PLEKHA8P1O95397 391 aa14.29□□□□□ -0.12
SMARCA4-208ENST00000585799 KRT2P35908 639 aa14.29□□□□□ -0.12
SMARCA4-208ENST00000585799 STX17P56962 302 aa14.29□□□□□ -0.12
SMARCA4-208ENST00000585799 ADALQ6DHV7 355 aa14.29□□□□□ -0.12
SMARCA4-208ENST00000585799 KRI1Q8N9T8 703 aaKnown RBP14.29□□□□□ -0.12
SMARCA4-208ENST00000585799 SEC63Q9UGP8 760 aaKnown RBP14.29□□□□□ -0.12
SMARCA4-208ENST00000585799 ELP1O95163 1332 aa14.29□□□□□ -0.12
SMARCA4-208ENST00000585799 UQCRHLA0A096LP55 91 aa14.28□□□□□ -0.12
SMARCA4-208ENST00000585799 UQCRHP07919 91 aa14.28□□□□□ -0.12
SMARCA4-208ENST00000585799 BTDP43251 543 aa14.28□□□□□ -0.12
SMARCA4-208ENST00000585799 GPKOWQ92917 476 aaPredicted RBP eCLIP14.28□□□□□ -0.12
SMARCA4-208ENST00000585799 HPS5Q9UPZ3 1129 aa14.28□□□□□ -0.12
SMARCA4-208ENST00000585799 ALS2Q96Q42 1657 aa14.28□□□□□ -0.12
SMARCA4-208ENST00000585799 SSBP05455 408 aaKnown RBP eCLIP14.28□□□□□ -0.12
SMARCA4-208ENST00000585799 TPM3P06753 285 aa14.28□□□□□ -0.12
SMARCA4-208ENST00000585799 GRAPQ13588 217 aa14.28□□□□□ -0.12
SMARCA4-208ENST00000585799 C11orf57Q6ZUT1 292 aaPredicted RBP14.28□□□□□ -0.12
SMARCA4-208ENST00000585799 GRAPLQ8TC17 118 aaPredicted RBP14.28□□□□□ -0.12
SMARCA4-208ENST00000585799 ABCC12Q96J65 1359 aa14.28□□□□□ -0.12
SMARCA4-208ENST00000585799 PCMTD1Q96MG8 357 aaPredicted RBP14.28□□□□□ -0.12
SMARCA4-208ENST00000585799 CPVLQ9H3G5 476 aa14.28□□□□□ -0.12
SMARCA4-208ENST00000585799 KCNH3Q9ULD8 1083 aa14.28□□□□□ -0.12
SMARCA4-208ENST00000585799 RIC1Q4ADV7 1423 aa14.28□□□□□ -0.12
SMARCA4-208ENST00000585799 XDHP47989 1333 aa14.28□□□□□ -0.12
SMARCA4-208ENST00000585799 PNOCQ13519 176 aa14.28□□□□□ -0.12
SMARCA4-208ENST00000585799 DPP8Q6V1X1 898 aaPredicted RBP14.28□□□□□ -0.12
SMARCA4-208ENST00000585799 NOSTRINQ8IVI9 506 aa14.28□□□□□ -0.12
SMARCA4-208ENST00000585799 MARF1Q9Y4F3 1742 aaKnown RBP14.28□□□□□ -0.12
SMARCA4-208ENST00000585799 USP17L3A6NCW0 530 aa14.27□□□□□ -0.12
SMARCA4-208ENST00000585799 USP17L4A6NCW7 530 aa14.27□□□□□ -0.12
SMARCA4-208ENST00000585799 YEATS4O95619 227 aa14.27□□□□□ -0.12
SMARCA4-208ENST00000585799 USP17L1Q7RTZ2 530 aa14.27□□□□□ -0.12
SMARCA4-208ENST00000585799 SLC51AQ86UW1 340 aa14.27□□□□□ -0.12
SMARCA4-208ENST00000585799 SLF2Q8IX21 1173 aa14.27□□□□□ -0.12
SMARCA4-208ENST00000585799 RTEL1Q9NZ71 1219 aa14.27□□□□□ -0.12
SMARCA4-208ENST00000585799 SMTNL1A8MU46 457 aa14.27□□□□□ -0.13
SMARCA4-208ENST00000585799 PTPN21Q16825 1174 aa14.27□□□□□ -0.13
SMARCA4-208ENST00000585799 ZNF827Q17R98 1081 aa14.27□□□□□ -0.13
SMARCA4-208ENST00000585799 ATL3Q6DD88 541 aa14.27□□□□□ -0.13
SMARCA4-208ENST00000585799 IGDCC4Q8TDY8 1250 aa14.27□□□□□ -0.13
SMARCA4-208ENST00000585799 SH3RF3Q8TEJ3 882 aaPredicted RBP14.27□□□□□ -0.13
SMARCA4-208ENST00000585799 SMARCE1Q969G3 411 aa14.27□□□□□ -0.13
SMARCA4-208ENST00000585799 SF3B2Q13435 895 aaKnown RBP14.27□□□□□ -0.13
SMARCA4-208ENST00000585799 RASGRP4Q8TDF6 673 aa14.27□□□□□ -0.13
SMARCA4-208ENST00000585799 GPCPD1Q9NPB8 672 aa14.27□□□□□ -0.13
SMARCA4-208ENST00000585799 IFNKQ9P0W0 207 aa14.27□□□□□ -0.13
SMARCA4-208ENST00000585799 NAPAP54920 295 aa14.26□□□□□ -0.13
SMARCA4-208ENST00000585799 LRMPQ12912 555 aa14.26□□□□□ -0.13
SMARCA4-208ENST00000585799 NOLC1Q14978 699 aaKnown RBP eCLIP14.26□□□□□ -0.137e-6■□□□□ 9
SMARCA4-208ENST00000585799 CPLX3Q8WVH0 158 aa14.26□□□□□ -0.13
SMARCA4-208ENST00000585799 NRBP1Q9UHY1 535 aa14.26□□□□□ -0.13
SMARCA4-208ENST00000585799 TTF2Q9UNY4 1162 aaKnown RBP14.26□□□□□ -0.13
SMARCA4-208ENST00000585799 STRCP1A6NGW2 1772 aa14.26□□□□□ -0.13
SMARCA4-208ENST00000585799 PRR5LQ6MZQ0 368 aa14.26□□□□□ -0.13
SMARCA4-208ENST00000585799 KIAA0825Q8IV33 1275 aa14.26□□□□□ -0.13
SMARCA4-208ENST00000585799 OXER1Q8TDS5 423 aa14.26□□□□□ -0.13
SMARCA4-208ENST00000585799 DCP1AQ9NPI6 582 aaPredicted RBP14.26□□□□□ -0.13
SMARCA4-208ENST00000585799 PHRF1Q9P1Y6 1649 aaKnown RBP14.26□□□□□ -0.13
SMARCA4-208ENST00000585799 LIFRP42702 1097 aa14.26□□□□□ -0.13
SMARCA4-208ENST00000585799 CCAR2Q8N163 923 aaKnown RBP14.26□□□□□ -0.13
SMARCA4-208ENST00000585799 ENAHQ8N8S7 591 aaPredicted RBP14.26□□□□□ -0.13
SMARCA4-208ENST00000585799 PNMA1Q8ND90 353 aa14.26□□□□□ -0.13
SMARCA4-208ENST00000585799 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.26□□□□□ -0.13
SMARCA4-208ENST00000585799 KCPQ6ZWJ8 1503 aa14.25□□□□□ -0.13
SMARCA4-208ENST00000585799 CALM1P0DP23 149 aa14.25□□□□□ -0.13
SMARCA4-208ENST00000585799 CALM2P0DP24 149 aa14.25□□□□□ -0.13
SMARCA4-208ENST00000585799 CALM3P0DP25 149 aa14.25□□□□□ -0.13
SMARCA4-208ENST00000585799 IFNAR1P17181 557 aa14.25□□□□□ -0.13
SMARCA4-208ENST00000585799 HSP90AA2PQ14568 343 aaPredicted RBP14.25□□□□□ -0.13
SMARCA4-208ENST00000585799 RILPL1Q5EBL4 403 aa14.25□□□□□ -0.13
SMARCA4-208ENST00000585799 CTR9Q6PD62 1173 aa14.25□□□□□ -0.13
SMARCA4-208ENST00000585799 NSUN4Q96CB9 384 aaKnown RBP14.25□□□□□ -0.13
SMARCA4-208ENST00000585799 BCL2L12Q9HB09 334 aa14.25□□□□□ -0.13
SMARCA4-208ENST00000585799 GPSM2P81274 684 aa14.25□□□□□ -0.13
SMARCA4-208ENST00000585799 STAG1Q8WVM7 1258 aa14.25□□□□□ -0.13
SMARCA4-208ENST00000585799 ZNF512BQ96KM6 892 aaPredicted RBP14.25□□□□□ -0.13
SMARCA4-208ENST00000585799 DBNDD1Q9H9R9 158 aa14.25□□□□□ -0.13
SMARCA4-208ENST00000585799 GRAMD1CQ8IYS0 662 aa14.25□□□□□ -0.13
SMARCA4-208ENST00000585799 CDK5RAP3Q96JB5 506 aa14.25□□□□□ -0.13
SMARCA4-208ENST00000585799 ZHX3Q9H4I2 956 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms